BLASTX nr result

ID: Atractylodes22_contig00010145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010145
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601360.1| Endoribonuclease Dicer-like protein [Medicag...    56   2e-10
ref|XP_004144598.1| PREDICTED: ribonuclease 3-like protein 3-lik...    52   9e-10
ref|XP_003601369.1| Endoribonuclease Dicer-like protein [Medicag...    59   7e-07
gb|ACG34313.1| endoribonuclease Dicer [Zea mays]                       56   8e-06
ref|NP_001141713.1| uncharacterized protein LOC100273842 [Zea ma...    56   8e-06

>ref|XP_003601360.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
           gi|355490408|gb|AES71611.1| Endoribonuclease Dicer-like
           protein [Medicago truncatula]
          Length = 783

 Score = 55.8 bits (133), Expect(2) = 2e-10
 Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = -1

Query: 686 HASPISGDLEVQ*FMLGTK*YPIHSYGMVDPPKTLADIVESLIGAFFLDT-FSMDLTWR 513
           H  P+ GD E+Q F+     YP+HS G++D PK LADIVES IGA F+D   S++  W+
Sbjct: 537 HKKPLLGD-EIQAFIKEVVEYPLHSNGLIDVPKILADIVESTIGAIFVDCGSSIETVWK 594



 Score = 35.0 bits (79), Expect(2) = 2e-10
 Identities = 21/70 (30%), Positives = 37/70 (52%)
 Frame = -2

Query: 400 LNSVFQVVQWLLQPLVTPKNSMMNPMSKFNEAR*KKGLPKHTKVWNSKKEEMEIYINNVL 221
           + +V++  + LL P++ P     +P ++ NE   K+GL    +      E +E+ I+  L
Sbjct: 589 IETVWKFFKKLLVPVIDPHTIQRHPSAELNEFCQKRGLKLQFRDLWKVSEIVEVLISEEL 648

Query: 220 VGTCKVKSKK 191
           VG+ K  SKK
Sbjct: 649 VGSGKCGSKK 658


>ref|XP_004144598.1| PREDICTED: ribonuclease 3-like protein 3-like [Cucumis sativus]
          Length = 275

 Score = 51.6 bits (122), Expect(2) = 9e-10
 Identities = 22/39 (56%), Positives = 28/39 (71%)
 Frame = -1

Query: 626 YPIHSYGMVDPPKTLADIVESLIGAFFLDTFSMDLTWRV 510
           YP+HS GM+  PK LADIVES IGA F D+  +D  W++
Sbjct: 146 YPLHSNGMIKAPKVLADIVESTIGAVFADSNFIDTVWKI 184



 Score = 37.4 bits (85), Expect(2) = 9e-10
 Identities = 18/78 (23%), Positives = 44/78 (56%)
 Frame = -2

Query: 400 LNSVFQVVQWLLQPLVTPKNSMMNPMSKFNEAR*KKGLPKHTKVWNSKKEEMEIYINNVL 221
           +++V+++ + L++PL+T K    +PM++  E   K+ L    +    + +E+E+ I   +
Sbjct: 178 IDTVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRSLKLEFRDRWEETKEIEVLIEKQV 237

Query: 220 VGTCKVKSKKSTENKSSR 167
           VG    + K   +N++++
Sbjct: 238 VGKGSYRKKLIAQNRAAK 255


>ref|XP_003601369.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
           gi|355490417|gb|AES71620.1| Endoribonuclease Dicer-like
           protein [Medicago truncatula]
          Length = 565

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
 Frame = -1

Query: 686 HASPISGDLEVQ*FMLGTK*YPIHSYGMVDPPKTLADIVESLIGAFFLDT-FSMDLTWRV 510
           H  P+ GD ++Q F  G   YP+HS G++D PK+LADIVES IGA F+D   S++  W+V
Sbjct: 320 HKKPLLGD-QIQEFTKGIAEYPLHSNGLIDVPKSLADIVESTIGAIFVDCGSSVETVWKV 378


>gb|ACG34313.1| endoribonuclease Dicer [Zea mays]
          Length = 329

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 25/40 (62%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
 Frame = -1

Query: 626 YPIHSYGMVDPPKTLADIVESLIGAFFLDT-FSMDLTWRV 510
           YP+HS G++DPPK L DIVESLIGA +LD+ F  +  WRV
Sbjct: 162 YPVHSNGLLDPPKVLCDIVESLIGAIYLDSNFDQEEVWRV 201


>ref|NP_001141713.1| uncharacterized protein LOC100273842 [Zea mays]
           gi|194705648|gb|ACF86908.1| unknown [Zea mays]
           gi|414870636|tpg|DAA49193.1| TPA: endoribonuclease Dicer
           [Zea mays]
          Length = 329

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 25/40 (62%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
 Frame = -1

Query: 626 YPIHSYGMVDPPKTLADIVESLIGAFFLDT-FSMDLTWRV 510
           YP+HS G++DPPK L DIVESLIGA +LD+ F  +  WRV
Sbjct: 162 YPVHSNGLLDPPKVLCDIVESLIGAIYLDSNFDQEEVWRV 201


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