BLASTX nr result

ID: Atractylodes22_contig00010131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010131
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267092.1| PREDICTED: dof zinc finger protein DOF5.4-li...   209   6e-52
ref|NP_001236806.1| Dof22 [Glycine max] gi|112363400|gb|ABI16024...   173   5e-41
ref|XP_002322044.1| f-box family protein [Populus trichocarpa] g...   170   6e-40
ref|XP_002317948.1| f-box family protein [Populus trichocarpa] g...   167   5e-39
ref|XP_003524495.1| PREDICTED: dof zinc finger protein DOF5.4-li...   166   1e-38

>ref|XP_002267092.1| PREDICTED: dof zinc finger protein DOF5.4-like [Vitis vinifera]
          Length = 291

 Score =  209 bits (533), Expect = 6e-52
 Identities = 131/280 (46%), Positives = 155/280 (55%), Gaps = 12/280 (4%)
 Frame = -3

Query: 950 DRRLRPHPHHQDLNCPRCDSSNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGG 771
           DRRLRPH  +Q L CPRC+S NTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGG
Sbjct: 18  DRRLRPH-QNQALKCPRCESLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGG 76

Query: 770 GVRKPKRSTKPKPNTPSHRKXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPMLLSFNQPST 591
           G RK KRS K K ++ + R+                                 S N  ST
Sbjct: 77  GCRKTKRS-KAKSSSDAPRERKSNSHSSSESSSLTATTTAAATTATTEAVSAPSSNAAST 135

Query: 590 -------RFFNIPQSSTP----VTTFDQSAAGNMSPEIRTFTSLMTSSTDQLPLAFDSAV 444
                  RFF  PQS  P     T  D S+ GN+ PEI +FTSLMT S D   L F+ + 
Sbjct: 136 LVGFRESRFF-APQSPNPNFEMPTLLDHSSDGNIFPEIGSFTSLMTGSNDPAALGFNISD 194

Query: 443 QLHHHNTEHVVENQNPNQLQWMHTDE-KMPEIGSSGFMDQTAEMEXXXXXXXXXXXXXXG 267
                  E V +NQ   Q Q   +DE KM EI ++GF+DQT ++E               
Sbjct: 195 ISPFKYQEQVDQNQQWQQQQQKMSDELKMQEI-TAGFLDQTVQVE-LSALQNRSNHGGFP 252

Query: 266 TEDWQDGVDEGLFDLTGTVDQSDWSQSQWNHDHHPLNYFP 147
           + DWQ   D+G+FDL G VDQ  W+QSQW+ + HPL Y P
Sbjct: 253 SLDWQTSGDQGIFDLPGNVDQGYWTQSQWSDNDHPL-YLP 291


>ref|NP_001236806.1| Dof22 [Glycine max] gi|112363400|gb|ABI16024.1| Dof22 [Glycine max]
          Length = 341

 Score =  173 bits (439), Expect = 5e-41
 Identities = 109/321 (33%), Positives = 143/321 (44%), Gaps = 54/321 (16%)
 Frame = -3

Query: 950 DRRLRPHP--HHQD--LNCPRCDSSNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNV 783
           DRRLRPH   HHQ   + CPRCDS NTKFCYYNNYNLSQPRHFCK+CRRYWTKGGVLRNV
Sbjct: 18  DRRLRPHHQNHHQQPPIKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNV 77

Query: 782 PVGGGVRKPKRSTKPKPNTPSHRKXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPML---- 615
           PVGGG RK KRS KPK  T +                               PP L    
Sbjct: 78  PVGGGCRKSKRSNKPKTTTSAAATTSSNNNNNNPSSSSETAAATAPTPPQQPPPPLELEH 137

Query: 614 ----------LSFNQPSTRFFNIPQS-------------------STPVTTFDQSAAGNM 522
                      ++   +T   + P +                   + P    +QS +G +
Sbjct: 138 NSHSHSSSESSTYTVAATEAMSAPTTNAVSNNNLLLDNNRESKVFANPNPYLEQSRSGGL 197

Query: 521 SPEIRTFTSLMTSSTDQLPLAF---DSAVQL-------------HHHNTEHVVENQNPNQ 390
             +I +F+SL+  +   L   F   +S + +             + H  + V+       
Sbjct: 198 FSDIESFSSLVNLNNQALGFGFGNNNSNISILDATSFRFGVSVTNPHGNDQVLAAPGGGH 257

Query: 389 LQWMHTDEKMPEIGSSGFMDQTAEMEXXXXXXXXXXXXXXGTEDWQDGVDEGLFDLTGTV 210
            QW    +   E G++ F+D T  +E              G  DWQ G D+GLFDL  TV
Sbjct: 258 GQWQQQQQNHHEFGTASFLDHTVPLEFSSLQHKAGHQGGFGPLDWQPGGDQGLFDLPNTV 317

Query: 209 DQSDWS-QSQWNHDHHPLNYF 150
           DQ  W+  + W+   +P + F
Sbjct: 318 DQPYWTHHTHWSDQDNPSSLF 338


>ref|XP_002322044.1| f-box family protein [Populus trichocarpa]
           gi|118488417|gb|ABK96024.1| unknown [Populus
           trichocarpa] gi|222869040|gb|EEF06171.1| f-box family
           protein [Populus trichocarpa]
          Length = 321

 Score =  170 bits (430), Expect = 6e-40
 Identities = 119/299 (39%), Positives = 139/299 (46%), Gaps = 41/299 (13%)
 Frame = -3

Query: 950 DRRLRPHPH--HQDLNCPRCDSSNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPV 777
           DRRLRPH H  HQ L CPRCDS NTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPV
Sbjct: 21  DRRLRPHHHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPV 80

Query: 776 GGGVRKPKRS------------------TKPKPNTPSHRKXXXXXXXXXXXXXXXXXXXX 651
           GGG RK KRS                  T+P+     H++                    
Sbjct: 81  GGGCRKTKRSKLKQNTPSTTSDAITTSSTRPQELQEQHQRRDHMSSNSHSSSESSSLTAT 140

Query: 650 XXXXXXXTPPML--LSFNQPSTRFFN-------IPQS----STPVTTFDQSAAGNMSPEI 510
                      +  LS N  S    N        P+     S      +Q +   +  EI
Sbjct: 141 NNTNANTAVEAVSALSVNSVSNNLLNGIVESKIFPRGDMNPSFEPALLEQGSDCGIFSEI 200

Query: 509 RTFTSLMTSSTDQLPLAFDSAV-QLHHHNTEHVVENQNPNQLQWMHTDEKMPEIGSSGFM 333
            +FTSL+TS+ D L   F +   Q      EH V+N N NQ QW +  ++M      G +
Sbjct: 201 GSFTSLITSTND-LSFGFSNTTNQQQQQGLEHHVQN-NQNQQQWQNQHQEMT---GGGLI 255

Query: 332 DQTAEMEXXXXXXXXXXXXXXG----TEDWQDGVDE---GLFDLTGTVDQSDWSQSQWN 177
           DQT   E              G      DWQ G  +   G F L  TVDQ+ WSQSQWN
Sbjct: 256 DQTIHAELSALPSSSRSTENTGGGFGALDWQLGSGDQAGGFFYLPNTVDQAYWSQSQWN 314


>ref|XP_002317948.1| f-box family protein [Populus trichocarpa]
           gi|222858621|gb|EEE96168.1| f-box family protein
           [Populus trichocarpa]
          Length = 329

 Score =  167 bits (422), Expect = 5e-39
 Identities = 120/315 (38%), Positives = 148/315 (46%), Gaps = 47/315 (14%)
 Frame = -3

Query: 950 DRRLRPHPHH--QDLNCPRCDSSNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPV 777
           DR+LRPH H   Q L CPRCDS NTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPV
Sbjct: 21  DRKLRPHHHQNQQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPV 80

Query: 776 GGGVRK-----PKR-------------STKPKPNTPSHRKXXXXXXXXXXXXXXXXXXXX 651
           GGG RK     PK+             ST P+     H++                    
Sbjct: 81  GGGCRKTKRSRPKQNTPITTCDTITASSTTPQELQEQHQQRDHKSSDSHSSSESSSLTAT 140

Query: 650 XXXXXXXTPPMLLSFNQPS------------TRFF---NIPQSSTPVTTFDQSAAGNMSP 516
                  T   + + +  S            ++ F   N+  S  P +  +Q +   +  
Sbjct: 141 NNTNANTTAEAVSALSVSSVVSNNLLNGIVESKIFPHGNVNPSFEP-SLLEQGSDCGIFS 199

Query: 515 EIRTFTSLMTSSTDQLPLAFDSAVQLHH-----HNTEHVVENQNPNQLQWM-HTDEKMPE 354
           EI +FTSL+TS+ D     F + +  H         EH V++ N NQ QW  H  ++M  
Sbjct: 200 EIGSFTSLITSTNDLF--GFSNMMSQHQPPHQQQGLEHHVQH-NQNQQQWQNHQQQEMT- 255

Query: 353 IGSSGFMDQTAEMEXXXXXXXXXXXXXXG---TEDWQDGVDE---GLFDLTGTVDQSDWS 192
            G  G +DQT  +E              G     DWQ G  +    LFDL   VDQ+ WS
Sbjct: 256 -GGGGLIDQTVHVELSALPSSRSTKNDDGEFGALDWQLGSGDQATSLFDLPNAVDQAYWS 314

Query: 191 QSQWNHDHHPLNYFP 147
           QSQWN   HP  Y P
Sbjct: 315 QSQWNDQDHPSLYIP 329


>ref|XP_003524495.1| PREDICTED: dof zinc finger protein DOF5.4-like [Glycine max]
          Length = 292

 Score =  166 bits (419), Expect = 1e-38
 Identities = 112/295 (37%), Positives = 134/295 (45%), Gaps = 27/295 (9%)
 Frame = -3

Query: 950 DRRLRPHPHHQD-LNCPRCDSSNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVG 774
           DRRLRPH   Q  L CPRCDS NTKFCYYNNYNLSQPRHFCK+CRRYWTKGGVLRNVPVG
Sbjct: 16  DRRLRPHHQSQQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVG 75

Query: 773 GGVRKPKRSTKP--------KPNTPSHRKXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPM 618
           GG RK KRS+KP         P+   H                                 
Sbjct: 76  GGCRKSKRSSKPTKTSSQTASPDPDHHNNNTNSHSSSGSSSLTAAAATATTTTTTEAVSA 135

Query: 617 LLSFNQPSTRFFN--------IPQSSTPVTTFDQSAAGNMSPEIRTFTSLMTSSTD-QLP 465
             + N  S    N        IP   T          G +  EI  FTSL+T++T    P
Sbjct: 136 PETLNLDSNNNNNNMQESKLLIPALETNPLEHGTGDCGGIFSEIGPFTSLITTTTSTNEP 195

Query: 464 LAFDSAVQLHHHNTEHVVENQNPNQLQWMH--------TDEKMPEIGSSGFMDQTAEMEX 309
           LAF                  + +  QW+H         + K+PE   S  +D T +   
Sbjct: 196 LAFGFGNS----------TLPDASSFQWLHQKVSSSSNEELKLPE---SSLLDHTVDFH- 241

Query: 308 XXXXXXXXXXXXXGTEDWQDGVDEGLFDLTGTVDQSDWSQSQW-NHDHHPLNYFP 147
                        G+ DWQ G D+GLFDL  TVD + WS + W +HD+  L + P
Sbjct: 242 ----SKISHGGGFGSLDWQGGADQGLFDLPNTVDHAYWSHTHWSDHDNSTLFHLP 292


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