BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010044
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...   170   1e-40
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   170   1e-40
ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   170   1e-40
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   170   1e-40
ref|NP_178208.1| pre-mRNA-splicing factor CWC22 [Arabidopsis tha...   167   6e-40

>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
           homolog, partial [Cucumis sativus]
          Length = 780

 Score =  170 bits (431), Expect = 1e-40
 Identities = 85/106 (80%), Positives = 95/106 (89%), Gaps = 4/106 (3%)
 Frame = -3

Query: 307 LQEGMTNLGKSGGVYVRPFKMAR----IEDKSSMEHQRMTWDALQKSINGLVNKVNATNI 140
           L    +NLGKSGGVY+ PFK+AR    ++DKSS+E+QR+TWDAL+KSINGLVNKVNATNI
Sbjct: 211 LNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNI 270

Query: 139 KNIIPELFAENLYRGRGLFCGSCMESQMASPGFTDVFAALVAVVNT 2
           KNIIPELFAENL RGRGLFC SCM+SQMASPGFTDVFAALVAVVNT
Sbjct: 271 KNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNT 316


>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
          Length = 797

 Score =  170 bits (431), Expect = 1e-40
 Identities = 85/106 (80%), Positives = 95/106 (89%), Gaps = 4/106 (3%)
 Frame = -3

Query: 307 LQEGMTNLGKSGGVYVRPFKMAR----IEDKSSMEHQRMTWDALQKSINGLVNKVNATNI 140
           L    +NLGKSGGVY+ PFK+AR    ++DKSS+E+QR+TWDAL+KSINGLVNKVNATNI
Sbjct: 211 LNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNI 270

Query: 139 KNIIPELFAENLYRGRGLFCGSCMESQMASPGFTDVFAALVAVVNT 2
           KNIIPELFAENL RGRGLFC SCM+SQMASPGFTDVFAALVAVVNT
Sbjct: 271 KNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNT 316


>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 860

 Score =  170 bits (431), Expect = 1e-40
 Identities = 90/131 (68%), Positives = 104/131 (79%), Gaps = 7/131 (5%)
 Frame = -3

Query: 373 GSHQTTKGRRLQEG-PRFQKL--AELQEGMTNLGKSGGVYVRPFKMA----RIEDKSSME 215
           G      GR +++  PR   +    L   ++NLGKSGGVY+ PFKMA     ++DKSS+E
Sbjct: 249 GKKNDRNGRMVEDANPRRGTIPGGNLNGDVSNLGKSGGVYIPPFKMAMMMKEVQDKSSVE 308

Query: 214 HQRMTWDALQKSINGLVNKVNATNIKNIIPELFAENLYRGRGLFCGSCMESQMASPGFTD 35
           +QR+TWDAL+KSINGLVNKVNATNIKNIIPELFAENL RGRGLFC SCM+SQMASPGFTD
Sbjct: 309 YQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTD 368

Query: 34  VFAALVAVVNT 2
           VFAALVAVVNT
Sbjct: 369 VFAALVAVVNT 379


>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 871

 Score =  170 bits (430), Expect = 1e-40
 Identities = 89/124 (71%), Positives = 102/124 (82%), Gaps = 9/124 (7%)
 Frame = -3

Query: 346 RLQEGPRFQKLAELQEG-----MTNLGKSGGVYVRPFKMA----RIEDKSSMEHQRMTWD 194
           R+ E  + Q+ A +  G      +NLGKSGGVY+ PFKMA     ++DKSS+E+QR+TWD
Sbjct: 272 RMVEDEKPQRQATIPGGNLNGDASNLGKSGGVYIPPFKMAMMMKEVQDKSSVEYQRLTWD 331

Query: 193 ALQKSINGLVNKVNATNIKNIIPELFAENLYRGRGLFCGSCMESQMASPGFTDVFAALVA 14
           AL+KSINGLVNKVNATNIKNIIPELFAENL RGRGLFC SCM+SQMASPGFTDVFAALVA
Sbjct: 332 ALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVA 391

Query: 13  VVNT 2
           VVNT
Sbjct: 392 VVNT 395


>ref|NP_178208.1| pre-mRNA-splicing factor CWC22 [Arabidopsis thaliana]
           gi|6503305|gb|AAF14681.1|AC011713_29 Contains similarity
           to gb|U19615 LET 858 gene from Caenorhabditis elegans.
           ESTs gb|AI995150, gb|H76674 and gb|R84035 come from this
           gene [Arabidopsis thaliana] gi|22654971|gb|AAM98078.1|
           At1g80930/F23A5_23 [Arabidopsis thaliana]
           gi|28416525|gb|AAO42793.1| At1g80930/F23A5_23
           [Arabidopsis thaliana] gi|332198347|gb|AEE36468.1|
           pre-mRNA-splicing factor CWC22 [Arabidopsis thaliana]
          Length = 900

 Score =  167 bits (424), Expect = 6e-40
 Identities = 86/112 (76%), Positives = 97/112 (86%), Gaps = 7/112 (6%)
 Frame = -3

Query: 319 KLAELQEGMTN---LGKSGGVYVRPFKMAR----IEDKSSMEHQRMTWDALQKSINGLVN 161
           KLAEL     N   LGK+GGVY+ PFK+AR    +EDKSS+E+QR+TWDAL+KSINGLVN
Sbjct: 312 KLAELNPSENNAMALGKTGGVYIPPFKLARMMKEVEDKSSVEYQRLTWDALRKSINGLVN 371

Query: 160 KVNATNIKNIIPELFAENLYRGRGLFCGSCMESQMASPGFTDVFAALVAVVN 5
           KVNA+NIKNIIPELFAENL RGRGLFC SCM+SQMASPGFTDVFAALVAV+N
Sbjct: 372 KVNASNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVIN 423