BLASTX nr result

ID: Atractylodes22_contig00010043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010043
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...   160   8e-38
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   160   8e-38
ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   160   8e-38
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   160   8e-38
ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   159   2e-37

>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
           homolog, partial [Cucumis sativus]
          Length = 780

 Score =  160 bits (406), Expect = 8e-38
 Identities = 79/83 (95%), Positives = 82/83 (98%)
 Frame = -3

Query: 251 MMNEVQEKSSMEYQRMTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSC 72
           MM EVQ+KSS+EYQR+TWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSC
Sbjct: 234 MMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSC 293

Query: 71  MKSQMASPGFTDVFAALVAVVNT 3
           MKSQMASPGFTDVFAALVAVVNT
Sbjct: 294 MKSQMASPGFTDVFAALVAVVNT 316


>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
          Length = 797

 Score =  160 bits (406), Expect = 8e-38
 Identities = 79/83 (95%), Positives = 82/83 (98%)
 Frame = -3

Query: 251 MMNEVQEKSSMEYQRMTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSC 72
           MM EVQ+KSS+EYQR+TWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSC
Sbjct: 234 MMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSC 293

Query: 71  MKSQMASPGFTDVFAALVAVVNT 3
           MKSQMASPGFTDVFAALVAVVNT
Sbjct: 294 MKSQMASPGFTDVFAALVAVVNT 316


>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 860

 Score =  160 bits (406), Expect = 8e-38
 Identities = 79/83 (95%), Positives = 82/83 (98%)
 Frame = -3

Query: 251 MMNEVQEKSSMEYQRMTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSC 72
           MM EVQ+KSS+EYQR+TWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSC
Sbjct: 297 MMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSC 356

Query: 71  MKSQMASPGFTDVFAALVAVVNT 3
           MKSQMASPGFTDVFAALVAVVNT
Sbjct: 357 MKSQMASPGFTDVFAALVAVVNT 379


>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 871

 Score =  160 bits (406), Expect = 8e-38
 Identities = 79/83 (95%), Positives = 82/83 (98%)
 Frame = -3

Query: 251 MMNEVQEKSSMEYQRMTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSC 72
           MM EVQ+KSS+EYQR+TWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSC
Sbjct: 313 MMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSC 372

Query: 71  MKSQMASPGFTDVFAALVAVVNT 3
           MKSQMASPGFTDVFAALVAVVNT
Sbjct: 373 MKSQMASPGFTDVFAALVAVVNT 395


>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
          Length = 785

 Score =  159 bits (402), Expect = 2e-37
 Identities = 78/83 (93%), Positives = 81/83 (97%)
 Frame = -3

Query: 251 MMNEVQEKSSMEYQRMTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSC 72
           MM EVQ+KSS+EYQR+TWDALRKSINGLVNKVNATNIKNIIPELF ENLIRGRGLFCRSC
Sbjct: 217 MMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFGENLIRGRGLFCRSC 276

Query: 71  MKSQMASPGFTDVFAALVAVVNT 3
           MKSQMASPGFTDVFAALVAVVNT
Sbjct: 277 MKSQMASPGFTDVFAALVAVVNT 299


Top