BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010035
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antir...   231   3e-58
pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Syn...   221   3e-55
dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]     207   3e-51
ref|XP_002278023.1| PREDICTED: geranylgeranyl pyrophosphate synt...   206   6e-51
emb|CAN63418.1| hypothetical protein VITISV_007690 [Vitis vinifera]   206   6e-51

>gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus]
          Length = 297

 Score =  231 bits (588), Expect = 3e-58
 Identities = 135/284 (47%), Positives = 169/284 (59%), Gaps = 21/284 (7%)
 Frame = +3

Query: 3   GAHLSLSRINLTRPSTSPATSAYYRTTITARVAHNLSYWDSIQSDIDSHLKTAITIRQPI 182
           G   S+++   TRPST P   A  RT          +Y  +I+SDI+S+LK AI IR P 
Sbjct: 13  GLFPSITKSKTTRPSTRPVILAMTRTQ---------TYRATIESDIESYLKKAIPIRAPE 63

Query: 183 SVFEPMHHLTFAAPKTAASALCVAACELVGGNREDXXXXXXXXXXXXXXXYTHDHLRLTD 362
           SVFEPMHHLTFAAP+T+ASALCVAACELVGG+R D               YTH++L LTD
Sbjct: 64  SVFEPMHHLTFAAPRTSASALCVAACELVGGDRSDAMAAAAAVHLMHVAAYTHENLPLTD 123

Query: 363 KVESEPEIRHKFGPNIELLIGDGIMPFGFELLARSVDSAGRNSDKILRVIIEITRAVGAE 542
              S+ EI+HKF PNIELL GDGI+PFG EL+ARS+D    N D+ILR IIE+TR +G+E
Sbjct: 124 GPMSKSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPTRNNPDRILRAIIELTRVMGSE 183

Query: 543 GMVAG---------------------KPSRRLHXXXXXXXXXXXXXNEDEVERLKRYGVY 659
           G+V G                     K    LH             +ED++E+L+R+G+Y
Sbjct: 184 GIVEGQYHELGLNQLNDLELIEYVCKKKEGTLHACGAACGAILGGCDEDKIEKLRRFGLY 243

Query: 660 VGKVQGLLNEIGANGGGEMKLVENLRGLAMKELEYFDGRKIEYI 791
           VG VQGLL   G N  G    ++ L+ LA+KELE F G KIE I
Sbjct: 244 VGTVQGLL---GKNRSGFEGRIKELKELAVKELESFGGEKIELI 284


>pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small
           Subunit From Antirrhinum Majus gi|323463188|pdb|3QKC|A
           Chain A, Crystal Structure Of Geranyl Diphosphate
           Synthase Small Subunit From Antirrhinum Majus
          Length = 273

 Score =  221 bits (562), Expect = 3e-55
 Identities = 124/248 (50%), Positives = 155/248 (62%), Gaps = 21/248 (8%)
 Frame = +3

Query: 111 SYWDSIQSDIDSHLKTAITIRQPISVFEPMHHLTFAAPKTAASALCVAACELVGGNREDX 290
           +Y  +I+SDI+S+LK AI IR P SVFEPMHHLTFAAP+T+ASALCVAACELVGG+R D 
Sbjct: 8   TYRATIESDIESYLKKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDRSDA 67

Query: 291 XXXXXXXXXXXXXXYTHDHLRLTDKVESEPEIRHKFGPNIELLIGDGIMPFGFELLARSV 470
                         YTH++L LTD   S+ EI+HKF PNIELL GDGI+PFG EL+ARS+
Sbjct: 68  MAAAAAVHLMHVAAYTHENLPLTDGPMSKSEIQHKFDPNIELLTGDGIIPFGLELMARSM 127

Query: 471 DSAGRNSDKILRVIIEITRAVGAEGMVAG---------------------KPSRRLHXXX 587
           D    N D+ILR IIE+TR +G+EG+V G                     K    LH   
Sbjct: 128 DPTRNNPDRILRAIIELTRVMGSEGIVEGQYHELGLNQLNDLELIEYVCKKKEGTLHACG 187

Query: 588 XXXXXXXXXXNEDEVERLKRYGVYVGKVQGLLNEIGANGGGEMKLVENLRGLAMKELEYF 767
                     +ED++E+L+R+G+YVG VQGLL   G N  G    ++ L+ LA+KELE F
Sbjct: 188 AACGAILGGCDEDKIEKLRRFGLYVGTVQGLL---GKNRSGFEGRIKELKELAVKELESF 244

Query: 768 DGRKIEYI 791
            G KIE I
Sbjct: 245 GGEKIELI 252


>dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 306

 Score =  207 bits (528), Expect = 3e-51
 Identities = 113/280 (40%), Positives = 164/280 (58%), Gaps = 27/280 (9%)
 Frame = +3

Query: 45  STSPATSAYYRTTITARVAHNLSYWDSIQSDIDSHLKTAITIRQPISVFEPMHHLTFAAP 224
           S++P    +    +   ++ + SYW S+ +D+D+HLK AI IRQP++VFEPM HL  +AP
Sbjct: 20  SSNPKHPLFSHRPMVVAMSTDQSYWSSVNADLDTHLKQAIPIRQPLAVFEPMRHLILSAP 79

Query: 225 KTAASALCVAACELVGGNREDXXXXXXXXXXXXXXXYTHDHLRLTDKVESEPEIRHK-FG 401
           +T+A ALC+AACELVGG+R                  TH++L LTD+    P  R   +G
Sbjct: 80  QTSAPALCIAACELVGGHRNQAMAAASALRLVHASASTHENLPLTDRPRPMPRTRPTLYG 139

Query: 402 PNIELLIGDGIMPFGFELLARSVDSAGRNSDKILRVIIEITRAVGAEGMVAG-------- 557
           PNIELLI DGI+P+GFELLAR  D+A  NS+++LR IIEI+RA+G++G++ G        
Sbjct: 140 PNIELLIADGIIPYGFELLARDDDAAENNSNRVLRAIIEISRAMGSQGVIEGQYNESQYE 199

Query: 558 ------------------KPSRRLHXXXXXXXXXXXXXNEDEVERLKRYGVYVGKVQGLL 683
                             K    LH             +EDE+E+L+RYG+YVG VQG+L
Sbjct: 200 ESEGEEIFHVGWLQNVCRKKEGTLHACAGACGAILGGGSEDEIEKLRRYGLYVGMVQGIL 259

Query: 684 NEIGANGGGEMKLVENLRGLAMKELEYFDGRKIEYISTIL 803
           +++       +K V  LR LA+KEL+ F+  K++ IS ++
Sbjct: 260 SKVDERKEWPVKEVNKLRDLALKELKDFNQAKVKTISILV 299


>ref|XP_002278023.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
           chloroplastic [Vitis vinifera]
          Length = 298

 Score =  206 bits (525), Expect = 6e-51
 Identities = 123/294 (41%), Positives = 161/294 (54%), Gaps = 31/294 (10%)
 Frame = +3

Query: 15  SLSRINLTRPSTSPATSAYYRTTITARVAHNLSYWDSIQSDIDSHLKTAITIRQPISVFE 194
           +L R N  RPS  P         I   +A   SYW SI  DID+HL+  I IR+P SVF+
Sbjct: 16  TLHRSNHRRPSGGP---------IRVTMAQKSSYWTSINDDIDAHLRRVIAIREPFSVFK 66

Query: 195 PMHHLTFAAPKTAASALCVAACELVGGNREDXXXXXXXXXXXXXXXYTHDHLRLTD--KV 368
           PMHHLTFAAP+T A ALC+AACELVGG RE                Y H+H+ LTD  + 
Sbjct: 67  PMHHLTFAAPETTAPALCIAACELVGGRRELAIAAASALHLMHAASYFHEHIPLTDQPRA 126

Query: 369 ESEPEIRHKFGPNIELLIGDGIMPFGFELLARS--VDSAGRNSDKILRVIIEITRAVGAE 542
            S P     FGPNIELL GDG++PFG ELLA+S  +D    +SD+IL+VIIE+TR +G++
Sbjct: 127 NSPPRPGPTFGPNIELLTGDGMIPFGLELLAKSNNLDDDDEHSDRILQVIIELTRTIGSQ 186

Query: 543 GMVAG-------------------------KPSRRLHXXXXXXXXXXXXXNEDEVERLKR 647
           G+V G                         K    LH              E E+E+L++
Sbjct: 187 GVVNGQYIQAQCDESSPSVGKAGSTRIVTDKKGTELHACGAACGAILGGGKEKEIEKLRK 246

Query: 648 YGVYVGKVQGL--LNEIGANGGGEMKLVENLRGLAMKELEYFDGRKIEYISTIL 803
           YG Y G +Q +  L E+  N     +++E +R LA+KELEYFD  K+E IS+ +
Sbjct: 247 YGFYAGTIQKMSKLEEVEKN----REVIEEMRRLALKELEYFDEEKVEPISSFI 296


>emb|CAN63418.1| hypothetical protein VITISV_007690 [Vitis vinifera]
          Length = 298

 Score =  206 bits (525), Expect = 6e-51
 Identities = 123/294 (41%), Positives = 162/294 (55%), Gaps = 31/294 (10%)
 Frame = +3

Query: 15  SLSRINLTRPSTSPATSAYYRTTITARVAHNLSYWDSIQSDIDSHLKTAITIRQPISVFE 194
           +L R N  RPS  P         I   +A   SYW+SI  DID+HL+  ITIR+P SVF+
Sbjct: 16  TLHRSNHRRPSGGP---------IRVTMAQKSSYWNSINDDIDAHLRRVITIREPFSVFK 66

Query: 195 PMHHLTFAAPKTAASALCVAACELVGGNREDXXXXXXXXXXXXXXXYTHDHLRLTDKV-- 368
           PMHHLTFAAP+T A ALC+AACEL GG RE                Y H+H+ LTD+   
Sbjct: 67  PMHHLTFAAPETTAPALCIAACELFGGRRELAIAAASALHLMHAASYFHEHIPLTDQTRP 126

Query: 369 ESEPEIRHKFGPNIELLIGDGIMPFGFELLARS--VDSAGRNSDKILRVIIEITRAVGAE 542
            S P     FGPNIELL GDG++PFG ELLA+S  +D    +SD+IL+VIIE+TR +G++
Sbjct: 127 NSPPRPGPTFGPNIELLTGDGMIPFGLELLAKSNNLDDDDEHSDRILQVIIELTRXIGSQ 186

Query: 543 GMVAG-------------------------KPSRRLHXXXXXXXXXXXXXNEDEVERLKR 647
           G+V G                         K    LH              E E+E+L++
Sbjct: 187 GVVNGQYIQAQCDESSPSVGKAGSTRIVTDKKGTELHACGAACGAILGGGKEKEIEKLRK 246

Query: 648 YGVYVGKVQGL--LNEIGANGGGEMKLVENLRGLAMKELEYFDGRKIEYISTIL 803
           YG Y G +Q +  L E+  N     +++E +R LA+KELEYFD  K+E IS+ +
Sbjct: 247 YGFYAGTIQKMSKLEEVEKN----REVIEEMRRLALKELEYFDEEKVEPISSFI 296