BLASTX nr result

ID: Atractylodes22_contig00010025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010025
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK78691.1| putative elongation factor 1-beta [Brassica rapa]      137   7e-31
ref|XP_002890860.1| elongation factor 1-beta [Arabidopsis lyrata...   135   4e-30
gb|AFC01201.1| translation elongation factor [Ammopiptanthus mon...   134   6e-30
ref|NP_001077627.1| elongation factor 1-delta 1 [Arabidopsis tha...   134   1e-29
pir||E86426 probable elongation factor 1-beta [imported] - Arabi...   134   1e-29

>gb|ABK78691.1| putative elongation factor 1-beta [Brassica rapa]
          Length = 230

 Score =  137 bits (346), Expect = 7e-31
 Identities = 76/159 (47%), Positives = 84/159 (52%)
 Frame = +3

Query: 3   KKLDEYLLSRSYITGYQASKDDLTVHAAFTKPPSPQYVNVSRWYNHIEALLRIXXXXXXX 182
           KKLDE+LL+RSYITGYQASKDD+TV  A  KPPS QYVN SRWYNHI+ALLRI       
Sbjct: 14  KKLDEHLLTRSYITGYQASKDDITVFTALAKPPSSQYVNASRWYNHIDALLRISGVTAEG 73

Query: 183 XXXXXXXXXXFPEEATATPPXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXX 362
                       EEA ATPP                 LFG                    
Sbjct: 74  SGVVVEGSAPVAEEAVATPPAADSKDAADEEDDDDVDLFGEETEEEKKAAEERAASVKAS 133

Query: 363 XXXXXXXXXXXLLDVKPWDDETDMQKLEEAVRNVQMEGL 479
                      L+D+KPWDDETDM+KLEEAVR+ QMEGL
Sbjct: 134 TKKKESGKSSVLIDIKPWDDETDMKKLEEAVRSTQMEGL 172


>ref|XP_002890860.1| elongation factor 1-beta [Arabidopsis lyrata subsp. lyrata]
           gi|297336702|gb|EFH67119.1| elongation factor 1-beta
           [Arabidopsis lyrata subsp. lyrata]
          Length = 259

 Score =  135 bits (339), Expect = 4e-30
 Identities = 76/160 (47%), Positives = 86/160 (53%), Gaps = 1/160 (0%)
 Frame = +3

Query: 3   KKLDEYLLSRSYITGYQASKDDLTVHAAFTKPPSPQYVNVSRWYNHIEALLRIXXXXXXX 182
           KKLDE+LL+RSYITGYQASKDD+TV AA  KPP+ QYVN SRWYNHI+ALLRI       
Sbjct: 14  KKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRISGVSAEG 73

Query: 183 XXXXXXXXXXFPEEATATPPXXXXXXXXXXXXXXXXX-LFGXXXXXXXXXXXXXXXXXXX 359
                       EEA ATPP                  LFG                   
Sbjct: 74  SGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEEKKAAEERAASVKA 133

Query: 360 XXXXXXXXXXXXLLDVKPWDDETDMQKLEEAVRNVQMEGL 479
                       L+D+KPWDDETDM+KLEEAVR++QMEGL
Sbjct: 134 STKKKESGKSSVLIDIKPWDDETDMKKLEEAVRSIQMEGL 173


>gb|AFC01201.1| translation elongation factor [Ammopiptanthus mongolicus]
          Length = 231

 Score =  134 bits (338), Expect = 6e-30
 Identities = 77/159 (48%), Positives = 85/159 (53%)
 Frame = +3

Query: 3   KKLDEYLLSRSYITGYQASKDDLTVHAAFTKPPSPQYVNVSRWYNHIEALLRIXXXXXXX 182
           KKLDEYLLSRSYITGYQASKDDLTV+AA  + PS +YVNVSRW+NHI+ALLRI       
Sbjct: 15  KKLDEYLLSRSYITGYQASKDDLTVYAALPEVPSDKYVNVSRWFNHIDALLRISGVSGEG 74

Query: 183 XXXXXXXXXXFPEEATATPPXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXX 362
                       EE  ATPP                 LFG                    
Sbjct: 75  SGVTVEGSAPVAEETIATPPAADTKATAAEDDDDDVDLFGEETEEEKKAAEERAASVKAS 134

Query: 363 XXXXXXXXXXXLLDVKPWDDETDMQKLEEAVRNVQMEGL 479
                      LLDVKPWDDETDM+KL+EAVR+V MEGL
Sbjct: 135 VKKKESGKSSVLLDVKPWDDETDMKKLKEAVRSVSMEGL 173


>ref|NP_001077627.1| elongation factor 1-delta 1 [Arabidopsis thaliana]
           gi|332193075|gb|AEE31196.1| elongation factor 1-delta 1
           [Arabidopsis thaliana]
          Length = 260

 Score =  134 bits (336), Expect = 1e-29
 Identities = 75/160 (46%), Positives = 86/160 (53%), Gaps = 1/160 (0%)
 Frame = +3

Query: 3   KKLDEYLLSRSYITGYQASKDDLTVHAAFTKPPSPQYVNVSRWYNHIEALLRIXXXXXXX 182
           KKLDE+LL+RSYITGYQASKDD+TV AA  KPP+ QYVN SRWYNHI+ALLRI       
Sbjct: 14  KKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRISGVSAEG 73

Query: 183 XXXXXXXXXXFPEEATATPPXXXXXXXXXXXXXXXXX-LFGXXXXXXXXXXXXXXXXXXX 359
                       EEA ATPP                  LFG                   
Sbjct: 74  SGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEEKKAAEERAASVKA 133

Query: 360 XXXXXXXXXXXXLLDVKPWDDETDMQKLEEAVRNVQMEGL 479
                       L+D+KPWDDETDM+KLEEAV+++QMEGL
Sbjct: 134 STKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQMEGL 173


>pir||E86426 probable elongation factor 1-beta [imported] - Arabidopsis thaliana
           gi|12320854|gb|AAG50564.1|AC073506_6 elongation factor
           1-beta, putative [Arabidopsis thaliana]
          Length = 242

 Score =  134 bits (336), Expect = 1e-29
 Identities = 75/160 (46%), Positives = 86/160 (53%), Gaps = 1/160 (0%)
 Frame = +3

Query: 3   KKLDEYLLSRSYITGYQASKDDLTVHAAFTKPPSPQYVNVSRWYNHIEALLRIXXXXXXX 182
           KKLDE+LL+RSYITGYQASKDD+TV AA  KPP+ QYVN SRWYNHI+ALLRI       
Sbjct: 14  KKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRISGVSAEG 73

Query: 183 XXXXXXXXXXFPEEATATPPXXXXXXXXXXXXXXXXX-LFGXXXXXXXXXXXXXXXXXXX 359
                       EEA ATPP                  LFG                   
Sbjct: 74  SGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEEKKAAEERAASVKA 133

Query: 360 XXXXXXXXXXXXLLDVKPWDDETDMQKLEEAVRNVQMEGL 479
                       L+D+KPWDDETDM+KLEEAV+++QMEGL
Sbjct: 134 STKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQMEGL 173


Top