BLASTX nr result

ID: Atractylodes22_contig00010001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010001
         (1557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-...   375   e-101
ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotei...   372   e-100
ref|XP_002525006.1| RNA-binding protein with multiple splicing, ...   361   3e-97
emb|CAD33925.1| proline rich protein 3 [Cicer arietinum]              353   7e-95
gb|AFK46375.1| unknown [Medicago truncatula]                          348   2e-93

>ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-like [Vitis vinifera]
          Length = 328

 Score =  375 bits (963), Expect = e-101
 Identities = 195/292 (66%), Positives = 212/292 (72%)
 Frame = +2

Query: 182  NRLAGDEVRTIFISGLPEDVKERELQNLLRWLPGYEASQVNFKGEVPMGFALFSAPHFAI 361
            NR   DEVRTIFISGLPEDVKERELQNLLRWLPGYEASQVNFKGE PMGFALFS P  A+
Sbjct: 42   NRPNSDEVRTIFISGLPEDVKERELQNLLRWLPGYEASQVNFKGEHPMGFALFSTPQLAV 101

Query: 362  AARDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADPNSFDQSKRMRTGGDYTHTGXXX 541
            AA+DALQ+MVFDAESKSVLHTEMAKKNLFVKRGIVAD +++DQSKR+RTGGDYTHTG   
Sbjct: 102  AAKDALQEMVFDAESKSVLHTEMAKKNLFVKRGIVADSSAYDQSKRLRTGGDYTHTGYSS 161

Query: 542  XXXXXXXXXXVWXXXXXXXXXXXXXXXXXXXXVSQVXXXXXXXXXXXXXXXXSSYMPVQN 721
                      VW                    V  V                SSY+PVQN
Sbjct: 162  PSPFHPPPAPVWGPHGYMAPAPPPYDPYGAYPVPPV-----PMPAPAPVPAPSSYVPVQN 216

Query: 722  TKDNPPCNTLFXXXXXXXXXXXXXXXXFSVQPGFKQMKVLRQERHTVCFIEFEDVNSATN 901
            TKDNPPCNTLF                FSVQPGFKQMK+LRQERHTVCFIEFED+N+ATN
Sbjct: 217  TKDNPPCNTLFIGNLGENINEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDMNTATN 276

Query: 902  VHHSLQGAVIPSSGSVGMRIQYSKNPFGKRKDAGYPVVASGSNGSLAAISYQ 1057
            VHHSLQGAVIPSSGSVGMRIQYSKNPFGKRKD+G+PV  +G+NG+ A  +YQ
Sbjct: 277  VHHSLQGAVIPSSGSVGMRIQYSKNPFGKRKDSGHPVAVAGANGAPAPPTYQ 328


>ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
            sativus] gi|449515829|ref|XP_004164950.1| PREDICTED: U1
            small nuclear ribonucleoprotein A-like [Cucumis sativus]
          Length = 335

 Score =  372 bits (955), Expect = e-100
 Identities = 196/291 (67%), Positives = 209/291 (71%)
 Frame = +2

Query: 185  RLAGDEVRTIFISGLPEDVKERELQNLLRWLPGYEASQVNFKGEVPMGFALFSAPHFAIA 364
            R A DEVRTIFI+GLPEDVKERELQNLLRWLPGYEASQVNFKGE PMGFALFS   FAIA
Sbjct: 50   RHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIA 109

Query: 365  ARDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADPNSFDQSKRMRTGGDYTHTGXXXX 544
            A+DALQDMVFDAESKSVLHTEMAKKNLFVKRGIVAD + +DQSKR+RTGGDY HTG    
Sbjct: 110  AKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSP 169

Query: 545  XXXXXXXXXVWXXXXXXXXXXXXXXXXXXXXVSQVXXXXXXXXXXXXXXXXSSYMPVQNT 724
                     +W                    V  V                SSY+PVQNT
Sbjct: 170  SPFHAPPPPIWGPHGYMAPPPPPYDPYGGYPVPPV-----PMPAPAPVPAPSSYVPVQNT 224

Query: 725  KDNPPCNTLFXXXXXXXXXXXXXXXXFSVQPGFKQMKVLRQERHTVCFIEFEDVNSATNV 904
            KDNPPCNTLF                FSVQPGFKQMK+LRQERHTVCFIEFEDVN+ATNV
Sbjct: 225  KDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNV 284

Query: 905  HHSLQGAVIPSSGSVGMRIQYSKNPFGKRKDAGYPVVASGSNGSLAAISYQ 1057
            HHSLQGAVIPSSGSVGMRIQ+SKNPFGKRKDA YPV A G NG+  A++YQ
Sbjct: 285  HHSLQGAVIPSSGSVGMRIQFSKNPFGKRKDAAYPVSAPGVNGTPQAMAYQ 335


>ref|XP_002525006.1| RNA-binding protein with multiple splicing, putative [Ricinus
            communis] gi|223535714|gb|EEF37378.1| RNA-binding protein
            with multiple splicing, putative [Ricinus communis]
          Length = 337

 Score =  361 bits (926), Expect = 3e-97
 Identities = 188/287 (65%), Positives = 206/287 (71%)
 Frame = +2

Query: 197  DEVRTIFISGLPEDVKERELQNLLRWLPGYEASQVNFKGEVPMGFALFSAPHFAIAARDA 376
            DEVRTIFI+GLPEDVKERELQNLLRWLPGYEASQVN+KGE PMGFALFS   FAIAA++A
Sbjct: 56   DEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTSQFAIAAKEA 115

Query: 377  LQDMVFDAESKSVLHTEMAKKNLFVKRGIVADPNSFDQSKRMRTGGDYTHTGXXXXXXXX 556
            LQDM+FDAESKS+LHTEMAKKNLFVKRGIVAD N++DQSKR+RTGGDY+HT         
Sbjct: 116  LQDMLFDAESKSILHTEMAKKNLFVKRGIVADSNAYDQSKRLRTGGDYSHTAYTTPSPFH 175

Query: 557  XXXXXVWXXXXXXXXXXXXXXXXXXXXVSQVXXXXXXXXXXXXXXXXSSYMPVQNTKDNP 736
                 VW                    V QV                SSY+PVQNTKDNP
Sbjct: 176  PPPAPVWGPHGYMAPAPPPYDPYAGYPVPQV-----PMPAPAPMPAPSSYLPVQNTKDNP 230

Query: 737  PCNTLFXXXXXXXXXXXXXXXXFSVQPGFKQMKVLRQERHTVCFIEFEDVNSATNVHHSL 916
            PCNTLF                FSVQPGFKQMKVLRQERHTVCFIEFEDVNSA+NVH SL
Sbjct: 231  PCNTLFIGNLGENINEDELRGLFSVQPGFKQMKVLRQERHTVCFIEFEDVNSASNVHRSL 290

Query: 917  QGAVIPSSGSVGMRIQYSKNPFGKRKDAGYPVVASGSNGSLAAISYQ 1057
            QGAVIPSSGSVGMRIQYSKNPFGKRKD  + V +  +NG+  A++YQ
Sbjct: 291  QGAVIPSSGSVGMRIQYSKNPFGKRKDGSHSVASPSANGAPPAMTYQ 337


>emb|CAD33925.1| proline rich protein 3 [Cicer arietinum]
          Length = 284

 Score =  353 bits (906), Expect = 7e-95
 Identities = 182/287 (63%), Positives = 203/287 (70%)
 Frame = +2

Query: 197  DEVRTIFISGLPEDVKERELQNLLRWLPGYEASQVNFKGEVPMGFALFSAPHFAIAARDA 376
            +EVRTIFI+GLPEDVKERE+QNLLRWLPG+EASQ+NFK E PMGFALFS+PH AIAA+D 
Sbjct: 2    EEVRTIFITGLPEDVKEREIQNLLRWLPGFEASQLNFKAEKPMGFALFSSPHQAIAAKDI 61

Query: 377  LQDMVFDAESKSVLHTEMAKKNLFVKRGIVADPNSFDQSKRMRTGGDYTHTGXXXXXXXX 556
            LQDM+FD +SKSVLHTEMAKKNLFVKRGI AD  +FDQSKR+RT GDYTHTG        
Sbjct: 62   LQDMLFDPDSKSVLHTEMAKKNLFVKRGIGADAVAFDQSKRLRTAGDYTHTGYVTPSPFH 121

Query: 557  XXXXXVWXXXXXXXXXXXXXXXXXXXXVSQVXXXXXXXXXXXXXXXXSSYMPVQNTKDNP 736
                 VW                     +                  SSY+PVQNTKDNP
Sbjct: 122  PPPPPVW----GPHGYMAPPPPPPYDPYAGYPVAPVPMPAPVSIAAPSSYVPVQNTKDNP 177

Query: 737  PCNTLFXXXXXXXXXXXXXXXXFSVQPGFKQMKVLRQERHTVCFIEFEDVNSATNVHHSL 916
            PCNTLF                FSVQPGFKQMK+LRQERHTVCFIEFEDVNSATNVHH+L
Sbjct: 178  PCNTLFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNL 237

Query: 917  QGAVIPSSGSVGMRIQYSKNPFGKRKDAGYPVVASGSNGSLAAISYQ 1057
            QGAVIPSSGSVGMRIQYSKNPFGKRKD  +P+   G+NG+  A++YQ
Sbjct: 238  QGAVIPSSGSVGMRIQYSKNPFGKRKDGNFPMAVPGANGAPVALTYQ 284


>gb|AFK46375.1| unknown [Medicago truncatula]
          Length = 314

 Score =  348 bits (894), Expect = 2e-93
 Identities = 180/290 (62%), Positives = 205/290 (70%), Gaps = 1/290 (0%)
 Frame = +2

Query: 191  AGDEVRTIFISGLPEDVKERELQNLLRWLPGYEASQVNFKGEVPMGFALFSAPHFAIAAR 370
            + +EVRTIFI+GLPEDVKERELQNL RWLPG+EASQ+NFK E PMGFALF++PH AIAA+
Sbjct: 31   SSEEVRTIFITGLPEDVKERELQNLCRWLPGFEASQLNFKAEKPMGFALFNSPHQAIAAK 90

Query: 371  DALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADPNSFDQSKRMRTGGDYTHTGXXXXXX 550
            D LQDM+FD E+KSVLHTEMAKKNLFVKRGI AD  +FDQSKR+RT GDY HTG      
Sbjct: 91   DILQDMLFDPEAKSVLHTEMAKKNLFVKRGIGADAVAFDQSKRLRTAGDYNHTGYVTPSP 150

Query: 551  XXXXXXXVW-XXXXXXXXXXXXXXXXXXXXVSQVXXXXXXXXXXXXXXXXSSYMPVQNTK 727
                   VW                     V+QV                SSY+P+QNTK
Sbjct: 151  FHPPPPPVWGPHGYMAPPPPPPYDPYAGYPVAQV------PMPAPVSIAPSSYVPIQNTK 204

Query: 728  DNPPCNTLFXXXXXXXXXXXXXXXXFSVQPGFKQMKVLRQERHTVCFIEFEDVNSATNVH 907
            DNPPCNTLF                FSVQPGFKQMK++RQERHTVCFIEFEDVNSATNVH
Sbjct: 205  DNPPCNTLFIGNLGENINEEEVRGLFSVQPGFKQMKIIRQERHTVCFIEFEDVNSATNVH 264

Query: 908  HSLQGAVIPSSGSVGMRIQYSKNPFGKRKDAGYPVVASGSNGSLAAISYQ 1057
            H+LQGAVIPSSGS+GMRIQYSKNPFGKR+D  YP+   G+NG+  A++YQ
Sbjct: 265  HNLQGAVIPSSGSIGMRIQYSKNPFGKREDGTYPMAVPGANGAPVAMTYQ 314


Top