BLASTX nr result

ID: Atractylodes22_contig00009974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009974
         (923 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332583.1| f-box family protein [Populus trichocarpa] g...   181   2e-43
emb|CAB89831.1| Dof zinc finger protein [Solanum tuberosum]           171   2e-40
ref|XP_002311164.1| f-box family protein [Populus trichocarpa] g...   165   2e-38
ref|XP_004142752.1| PREDICTED: dof zinc finger protein DOF3.6-li...   157   3e-36
gb|AAO65880.1| putative DNA-binding protein [Oryza sativa Japoni...   147   4e-33

>ref|XP_002332583.1| f-box family protein [Populus trichocarpa]
           gi|222832921|gb|EEE71398.1| f-box family protein
           [Populus trichocarpa]
          Length = 337

 Score =  181 bits (459), Expect = 2e-43
 Identities = 117/294 (39%), Positives = 146/294 (49%), Gaps = 19/294 (6%)
 Frame = -3

Query: 921 PGSMVDRARLAKLPLPEPGLNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGAL 742
           PGSM DRARLAK+PLPE  L CPRC+STNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGAL
Sbjct: 57  PGSMTDRARLAKIPLPEMALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGAL 116

Query: 741 RNVPVGGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSENMTSTQLPHPPSLHL-PF 565
           RNVPVGGGC                               + ++T      PP L + P 
Sbjct: 117 RNVPVGGGCRRNKRSKGSGRSKSPVKAGSSSSGGLSSNGGTTDITGNMTTPPPLLPIFPP 176

Query: 564 MSSLGQY---------GGVGGNLSSSIGG-----FQPQNEXXXXXXXXXXXXXXXXXXXX 427
           +  LG Y         GG+  ++ ++ GG     FQ +N                     
Sbjct: 177 LHHLGDYNSPDIGLNFGGILPSVGATAGGGGGVEFQMENS---------TSSNSVGGSVL 227

Query: 426 XXXXGENWR---VPFQLPGFEVPNNTTNLFNYQNHDQGVIEAPSVGGDMRLKSTSGFDNS 256
                E WR   V  Q+  +   +N        + + G I   +  G +R +       S
Sbjct: 228 SSGLVEQWRLQQVQHQVQQYPFLSNLEPSSGLYSFEGGGIGPSNYAGQIRSRPLDSTGVS 287

Query: 255 QIDPPVKVEDNRGLNLSRQFLGMLESTNQQPWAG-NSWAEFPGVSTSTPTTHFL 97
           Q+   VK+E N+GLNLSR FLG+  S N Q W G N+W + PG  TS+ T+H L
Sbjct: 288 QL-ASVKMEGNQGLNLSRNFLGI--SGNDQYWGGNNAWTDLPGF-TSSSTSHLL 337


>emb|CAB89831.1| Dof zinc finger protein [Solanum tuberosum]
          Length = 324

 Score =  171 bits (434), Expect = 2e-40
 Identities = 111/300 (37%), Positives = 144/300 (48%), Gaps = 25/300 (8%)
 Frame = -3

Query: 921 PGSMVDRARLAKLPLPEPGLNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGAL 742
           PGSMVDRARLAK+PLPE GL CPRCDSTNTKFCYFNNY+L+QPRHFCKTCRRYWTRGGAL
Sbjct: 52  PGSMVDRARLAKIPLPEAGLKCPRCDSTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGAL 111

Query: 741 RNVPVGGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSENMT----STQL------- 595
           R+VPVGGGC                               S + +    ST++       
Sbjct: 112 RSVPVGGGCRRNKRSKSNNNNNSSKTAGSNVNTNTIASGTSTSASPSSCSTEIMNGRHHF 171

Query: 594 --PHPPSLHLPFMSSLGQYGGVGGNLSSSIGGFQPQ---NEXXXXXXXXXXXXXXXXXXX 430
               PP L  P M++         NL+   GGFQP    +                    
Sbjct: 172 SHEQPPQL-TPLMAAF-------QNLNHHYGGFQPPPLVSTHHGNGTGALGHHHEMGFQI 223

Query: 429 XXXXXGENWRVP--------FQLPGFEVPNNTTNLFNYQN-HDQGVIEAPSVGGDMRLKS 277
                  N  VP        ++LP      N   L+ +Q+  DQG+ E+ SV  +     
Sbjct: 224 GSSTNTNNLPVPPGGGSDHQWRLPSLAANTN---LYPFQHGTDQGIHESSSVNNN----- 275

Query: 276 TSGFDNSQIDPPVKVEDNRGLNLSRQFLGMLESTNQQPWAGNSWAEFPGVSTSTPTTHFL 97
                       +   D++GLN ++QFLG +E+   Q W GN+W  F G+++S+  +H L
Sbjct: 276 -----------NINAHDDQGLNSTKQFLGTMENNTNQYWGGNAWTGFSGLNSSSSASHLL 324


>ref|XP_002311164.1| f-box family protein [Populus trichocarpa]
           gi|222850984|gb|EEE88531.1| f-box family protein
           [Populus trichocarpa]
          Length = 334

 Score =  165 bits (417), Expect = 2e-38
 Identities = 108/284 (38%), Positives = 135/284 (47%), Gaps = 15/284 (5%)
 Frame = -3

Query: 921 PGSMVDRARLAKLPLPEPGLNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGAL 742
           PGSM DRARLAK+ LPE  L CPRC S NTKFCYFNNYSL+QPRHFCKTCRRYWT GGAL
Sbjct: 55  PGSMTDRARLAKVQLPETALKCPRCQSPNTKFCYFNNYSLSQPRHFCKTCRRYWTSGGAL 114

Query: 741 RNVPVGGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSENMTSTQLPHPPSLH-LPF 565
           RNVPVGGGC                               + ++     P PP L  LP 
Sbjct: 115 RNVPVGGGCRRNKRSKGSGRSKFPIKAVSSSSGGLASNCCTADILGHMPPPPPQLPILPP 174

Query: 564 MSSLGQYGGVG-----GNLSSSIGGFQPQNEXXXXXXXXXXXXXXXXXXXXXXXXGENWR 400
           +  LG Y         G +  SIG      +                         E WR
Sbjct: 175 LHHLGDYNSADIGLDFGGIQHSIGVTAGGGDGVEFQIGSSTSSNGVAGSLLSSGLVEQWR 234

Query: 399 VP------FQLPGFEVPNNTTNLFNYQNHDQGVIEAPSVGGDMRLK--STSGFDNSQIDP 244
           +        Q P F      + LF+++    G IE+ +  G +R K   T+G  +     
Sbjct: 235 LQQVQQQVQQFPFFSNMEPPSGLFSFEG---GGIESSNYAGQIRSKPLDTTGVTHL---A 288

Query: 243 PVKVEDNRGLNLSRQFLGMLESTNQQPWAG-NSWAEFPGVSTST 115
            VK E+N+ LNLS++ LG+  S   Q W G N+W + PG ++ST
Sbjct: 289 TVKTEENQRLNLSKKVLGI--SGIDQHWGGNNAWTDLPGFTSST 330


>ref|XP_004142752.1| PREDICTED: dof zinc finger protein DOF3.6-like [Cucumis sativus]
           gi|449483850|ref|XP_004156711.1| PREDICTED: dof zinc
           finger protein DOF3.6-like [Cucumis sativus]
          Length = 361

 Score =  157 bits (398), Expect = 3e-36
 Identities = 114/310 (36%), Positives = 146/310 (47%), Gaps = 35/310 (11%)
 Frame = -3

Query: 921 PGSMVDRARLAKLPLPEPGLNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGAL 742
           PGSM DRARLAK+P PE GL CPRC+STNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGA+
Sbjct: 64  PGSMTDRARLAKIPQPEAGLKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGAM 123

Query: 741 RNVPVGGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSE---NMTSTQLPH----PP 583
           RNVPVGGGC                               +    ++ S QL H    PP
Sbjct: 124 RNVPVGGGCRRSSKRSSKGGSNNRSKSPGGSSTSTSTVSSNSCTTDIISPQLAHHHHPPP 183

Query: 582 SLHLPFMSSLGQYGGVGGNLSSSIGGFQPQNEXXXXXXXXXXXXXXXXXXXXXXXXGENW 403
           + HLPF S    +    GNL  +    Q  N                            W
Sbjct: 184 TTHLPFFSQNLHHLSEFGNLGLNFEALQIPNS------LPSSAESSSVLSSGIISDHHPW 237

Query: 402 RVPF-----QLPGF----------EVPNNTTNLFNYQNHDQGVIEAPSVGGDMRLKSTSG 268
           ++PF     Q  G                T +  NYQ   + ++E+   G + +L++ + 
Sbjct: 238 KIPFFGNLHQQNGIYSNFIGDQDHHHQQQTADFTNYQRLSKPLLES---GFNHQLENINI 294

Query: 267 FDNSQIDPPVKV-EDNRGL-NLSRQFLGM-------LESTNQQPWAGN-SWAEFP---GV 127
            +N+     +K+ ED +G+ NLSR FLG+         ST     AGN  W+  P     
Sbjct: 295 NNNNN---SMKILEDTQGINNLSRNFLGIQPNEDQFWNSTTTTTTAGNIGWSSDPISDHF 351

Query: 126 STSTPTTHFL 97
           +T++ TTH L
Sbjct: 352 NTTSSTTHLL 361


>gb|AAO65880.1| putative DNA-binding protein [Oryza sativa Japonica Group]
           gi|108711798|gb|ABF99593.1| Dof domain, zinc finger
           family protein, expressed [Oryza sativa Japonica Group]
          Length = 355

 Score =  147 bits (370), Expect = 4e-33
 Identities = 62/69 (89%), Positives = 66/69 (95%)
 Frame = -3

Query: 921 PGSMVDRARLAKLPLPEPGLNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGAL 742
           PGSM +RARLAK+P PEPGL CPRC+STNTKFCYFNNYSL+QPRHFCKTCRRYWTRGGAL
Sbjct: 40  PGSMTERARLAKIPQPEPGLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGAL 99

Query: 741 RNVPVGGGC 715
           RNVPVGGGC
Sbjct: 100 RNVPVGGGC 108


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