BLASTX nr result

ID: Atractylodes22_contig00009960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009960
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK65758.1| GIGANTEA, partial [Chrysanthemum x morifolium]         127   2e-27
dbj|BAM67030.1| gigantea-like [Chrysanthemum seticuspe f. boreale]    122   4e-26
ref|XP_002524341.1| Protein GIGANTEA, putative [Ricinus communis...   112   5e-23
gb|AEK05861.1| gigantea-5 [Populus balsamifera] gi|339778013|gb|...   110   2e-22
ref|XP_002307516.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22

>gb|AFK65758.1| GIGANTEA, partial [Chrysanthemum x morifolium]
          Length = 1151

 Score =  127 bits (318), Expect = 2e-27
 Identities = 60/89 (67%), Positives = 73/89 (82%), Gaps = 7/89 (7%)
 Frame = -3

Query: 563  SHPSAHVRTLSISVLRAILHVGSIKPSSEQVNVSSNLG-------ANIIDWDSDLGKCLT 405
            SHPSAHVRT+SISVLRAILHVG ++ S E+ N+ +  G        ++ DW+SD+GKCLT
Sbjct: 1063 SHPSAHVRTVSISVLRAILHVGVLRTSGEEANIPAACGPAYQYLNVDVTDWESDVGKCLT 1122

Query: 404  WEAHSRLATGMPIEYLDTAAKELGCPISI 318
            WEAHSR+ATGMPI+YL+TAAKELGCPISI
Sbjct: 1123 WEAHSRIATGMPIQYLNTAAKELGCPISI 1151


>dbj|BAM67030.1| gigantea-like [Chrysanthemum seticuspe f. boreale]
          Length = 1145

 Score =  122 bits (306), Expect = 4e-26
 Identities = 59/89 (66%), Positives = 69/89 (77%), Gaps = 7/89 (7%)
 Frame = -3

Query: 563  SHPSAHVRTLSISVLRAILHVGSIKPSSEQVNVSSNLG-------ANIIDWDSDLGKCLT 405
            SHPSAHVRTLS SVLRAILHVG + P     N+ +  G        ++ DW+SD+GKCLT
Sbjct: 1057 SHPSAHVRTLSTSVLRAILHVGLVNPIGAPPNIPAACGPAYQYLNVDVTDWESDVGKCLT 1116

Query: 404  WEAHSRLATGMPIEYLDTAAKELGCPISI 318
            WEAHSR+ATGMPI+YL+TAAKELGCPISI
Sbjct: 1117 WEAHSRIATGMPIQYLNTAAKELGCPISI 1145


>ref|XP_002524341.1| Protein GIGANTEA, putative [Ricinus communis]
            gi|223536432|gb|EEF38081.1| Protein GIGANTEA, putative
            [Ricinus communis]
          Length = 1161

 Score =  112 bits (279), Expect = 5e-23
 Identities = 55/89 (61%), Positives = 68/89 (76%), Gaps = 7/89 (7%)
 Frame = -3

Query: 563  SHPSAHVRTLSISVLRAILHVGSIKPSSEQVNVSSNLGAN-------IIDWDSDLGKCLT 405
            SHPSAHVR +S SVLR IL+ GSIK +S +V+++   G +       + DW +D+ KCLT
Sbjct: 1073 SHPSAHVRAVSTSVLRGILYTGSIKRTSNRVDINGIRGPSYQYFNIDVTDWQTDIEKCLT 1132

Query: 404  WEAHSRLATGMPIEYLDTAAKELGCPISI 318
            WEAHSRLATGMPI++LDTAAKELGC ISI
Sbjct: 1133 WEAHSRLATGMPIQFLDTAAKELGCTISI 1161


>gb|AEK05861.1| gigantea-5 [Populus balsamifera] gi|339778013|gb|AEK05866.1|
           gigantea-5 [Populus balsamifera]
           gi|339778019|gb|AEK05871.1| gigantea-5 [Populus
           balsamifera] gi|339778025|gb|AEK05876.1| gigantea-5
           [Populus balsamifera]
          Length = 173

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/89 (61%), Positives = 67/89 (75%), Gaps = 7/89 (7%)
 Frame = -3

Query: 563 SHPSAHVRTLSISVLRAILHVGSIKPSSEQVNVSSNLG-------ANIIDWDSDLGKCLT 405
           SHPSAHVR LS SVLR I H GSIKP+S+  + +   G       +++I+W +D+ KCLT
Sbjct: 85  SHPSAHVRALSTSVLRDIQHTGSIKPASKLTHRNGIHGPSYQYLRSDVINWQADIEKCLT 144

Query: 404 WEAHSRLATGMPIEYLDTAAKELGCPISI 318
           WEAHSRLATGMP+ +LDTAAKELGC ISI
Sbjct: 145 WEAHSRLATGMPVHHLDTAAKELGCTISI 173


>ref|XP_002307516.1| predicted protein [Populus trichocarpa] gi|222856965|gb|EEE94512.1|
            predicted protein [Populus trichocarpa]
          Length = 1171

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/89 (61%), Positives = 67/89 (75%), Gaps = 7/89 (7%)
 Frame = -3

Query: 563  SHPSAHVRTLSISVLRAILHVGSIKPSSEQVNVSSNLG-------ANIIDWDSDLGKCLT 405
            SHPSAHVR LS SVLR I H GSIKP+S+  + +   G       +++I+W +D+ KCLT
Sbjct: 1083 SHPSAHVRALSTSVLRDIQHTGSIKPASKLTHRNGIHGPSYQYLRSDVINWQADIEKCLT 1142

Query: 404  WEAHSRLATGMPIEYLDTAAKELGCPISI 318
            WEAHSRLATGMP+ +LDTAAKELGC ISI
Sbjct: 1143 WEAHSRLATGMPVHHLDTAAKELGCTISI 1171


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