BLASTX nr result
ID: Atractylodes22_contig00009937
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00009937
(342 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 141 6e-32
ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containi... 140 8e-32
ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containi... 138 5e-31
emb|CBI18516.3| unnamed protein product [Vitis vinifera] 138 5e-31
emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera] 138 5e-31
>ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g55840-like [Cucumis sativus]
Length = 1079
Score = 141 bits (355), Expect = 6e-32
Identities = 63/112 (56%), Positives = 85/112 (75%)
Frame = +2
Query: 5 TFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSSYTYGSLLKALCYGGNFEEAMKFLNKI 184
TFDCIIN Y ++G+G A S F++M++ GH PS +TYGSLLK LC G NF EA K L K+
Sbjct: 527 TFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKL 586
Query: 185 RCIPHALDVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLLA 340
CIP A+D ++YN L+ EI KSGN+ AV L ++M+ NN++PDS+TYTC+L+
Sbjct: 587 HCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILS 638
Score = 55.5 bits (132), Expect = 4e-06
Identities = 29/112 (25%), Positives = 54/112 (48%)
Frame = +2
Query: 2 STFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSSYTYGSLLKALCYGGNFEEAMKFLNK 181
S+F+ +I+ G KA++ M G+ P+ +Y +LL C G F+ A+ ++
Sbjct: 176 SSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHH 235
Query: 182 IRCIPHALDVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLL 337
+ C DV YNM + +C++ +LK M + + P+ +Y L+
Sbjct: 236 MECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLI 287
>ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 140 bits (354), Expect = 8e-32
Identities = 63/112 (56%), Positives = 84/112 (75%)
Frame = +2
Query: 5 TFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSSYTYGSLLKALCYGGNFEEAMKFLNKI 184
TFDCIIN Y ++G+G A S F+ M++ GH PS +TYGSLLK LC G NF EA K L K+
Sbjct: 527 TFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKL 586
Query: 185 RCIPHALDVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLLA 340
CIP A+D ++YN L+ EI KSGN+ AV L ++M+ NN++PDS+TYTC+L+
Sbjct: 587 HCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILS 638
Score = 55.5 bits (132), Expect = 4e-06
Identities = 29/112 (25%), Positives = 54/112 (48%)
Frame = +2
Query: 2 STFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSSYTYGSLLKALCYGGNFEEAMKFLNK 181
S+F+ +I+ G KA++ M G+ P+ +Y +LL C G F+ A+ ++
Sbjct: 176 SSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHH 235
Query: 182 IRCIPHALDVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLL 337
+ C DV YNM + +C++ +LK M + + P+ +Y L+
Sbjct: 236 MECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLI 287
Score = 55.5 bits (132), Expect = 4e-06
Identities = 31/111 (27%), Positives = 54/111 (48%)
Frame = +2
Query: 5 TFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSSYTYGSLLKALCYGGNFEEAMKFLNKI 184
TF +IN + +GN KA ++ G P++ + +L+ C GN EAMKF +
Sbjct: 422 TFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAM 481
Query: 185 RCIPHALDVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLL 337
D N L+A +C++G + A L + ++P+S T+ C++
Sbjct: 482 NLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCII 532
>ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 138 bits (347), Expect = 5e-31
Identities = 67/111 (60%), Positives = 81/111 (72%)
Frame = +2
Query: 5 TFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSSYTYGSLLKALCYGGNFEEAMKFLNKI 184
T+DCIIN Y S+G+ L A SFF++M+ G PS +TYGSLLK LC GGN EA KFLN++
Sbjct: 1336 TYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRL 1395
Query: 185 RCIPHALDVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLL 337
IP A+D V YN LLAE CKSGN+ AV L MV NNV+PDS+TY+ LL
Sbjct: 1396 HYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLL 1446
Score = 63.2 bits (152), Expect = 2e-08
Identities = 35/111 (31%), Positives = 61/111 (54%)
Frame = +2
Query: 5 TFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSSYTYGSLLKALCYGGNFEEAMKFLNKI 184
T++ +I + +G+ +AL + M G + + TYG+LL LC FE A + L ++
Sbjct: 1126 TYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERM 1185
Query: 185 RCIPHALDVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLL 337
R + +AY +L+ +CK+G + AV L+ +M + V PD TY+ L+
Sbjct: 1186 RVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLI 1236
Score = 59.7 bits (143), Expect = 2e-07
Identities = 35/111 (31%), Positives = 56/111 (50%)
Frame = +2
Query: 5 TFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSSYTYGSLLKALCYGGNFEEAMKFLNKI 184
T++ +IN +V G A F EM P+ TY +L+ C+ G+FEEA++ L+ +
Sbjct: 1091 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 1150
Query: 185 RCIPHALDVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLL 337
L+ V Y LL +CK + A LL+ M N+++ YT L+
Sbjct: 1151 EAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLI 1201
Score = 57.8 bits (138), Expect = 9e-07
Identities = 32/111 (28%), Positives = 51/111 (45%)
Frame = +2
Query: 5 TFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSSYTYGSLLKALCYGGNFEEAMKFLNKI 184
T+ +IN + +GN A M G + Y +L+ C GN EAMK +
Sbjct: 1231 TYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVM 1290
Query: 185 RCIPHALDVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLL 337
C H D N+L++ +C+ G + A L M ++P+S TY C++
Sbjct: 1291 NCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCII 1341
Score = 57.4 bits (137), Expect = 1e-06
Identities = 33/111 (29%), Positives = 54/111 (48%)
Frame = +2
Query: 5 TFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSSYTYGSLLKALCYGGNFEEAMKFLNKI 184
TF+ +IN GN KA + ++M G P+ TY +LL C G ++ A++ ++ +
Sbjct: 986 TFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM 1045
Query: 185 RCIPHALDVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLL 337
C DV YN+ + +C + A LLK M + P+ TY L+
Sbjct: 1046 ICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 1096
>emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 138 bits (347), Expect = 5e-31
Identities = 67/111 (60%), Positives = 81/111 (72%)
Frame = +2
Query: 5 TFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSSYTYGSLLKALCYGGNFEEAMKFLNKI 184
T+DCIIN Y S+G+ L A SFF++M+ G PS +TYGSLLK LC GGN EA KFLN++
Sbjct: 468 TYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRL 527
Query: 185 RCIPHALDVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLL 337
IP A+D V YN LLAE CKSGN+ AV L MV NNV+PDS+TY+ LL
Sbjct: 528 HYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLL 578
Score = 57.4 bits (137), Expect = 1e-06
Identities = 33/111 (29%), Positives = 54/111 (48%)
Frame = +2
Query: 5 TFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSSYTYGSLLKALCYGGNFEEAMKFLNKI 184
TF+ +IN GN KA + ++M G P+ TY +LL C G ++ A++ ++ +
Sbjct: 235 TFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM 294
Query: 185 RCIPHALDVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLL 337
C DV YN+ + +C + A LLK M + P+ TY L+
Sbjct: 295 ICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 345
Score = 57.4 bits (137), Expect = 1e-06
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 23/134 (17%)
Frame = +2
Query: 5 TFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSSYTYGSLLKALCYGGNFEEAMKFLNKI 184
T++ +IN +V G A F EM P+ TY +L+ C+ G+FEEA++ L+ +
Sbjct: 340 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 399
Query: 185 R-----------------------CIPHALDVVAYNMLLAEICKSGNVQAAVFLLKDMVH 295
C H D N+L++ +C+ G + A L M
Sbjct: 400 EAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSR 459
Query: 296 NNVIPDSHTYTCLL 337
++P+S TY C++
Sbjct: 460 IGLVPNSITYDCII 473
>emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 138 bits (347), Expect = 5e-31
Identities = 67/111 (60%), Positives = 81/111 (72%)
Frame = +2
Query: 5 TFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSSYTYGSLLKALCYGGNFEEAMKFLNKI 184
T+DCIIN Y S+G+ L A SFF++M+ G PS +TYGSLLK LC GGN EA KFLN++
Sbjct: 585 TYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRL 644
Query: 185 RCIPHALDVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLL 337
IP A+D V YN LLAE CKSGN+ AV L MV NNV+PDS+TY+ LL
Sbjct: 645 HYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLL 695
Score = 63.2 bits (152), Expect = 2e-08
Identities = 35/111 (31%), Positives = 61/111 (54%)
Frame = +2
Query: 5 TFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSSYTYGSLLKALCYGGNFEEAMKFLNKI 184
T++ +I + +G+ +AL + M G + + TYG+LL LC FE A + L ++
Sbjct: 375 TYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERM 434
Query: 185 RCIPHALDVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLL 337
R + +AY +L+ +CK+G + AV L+ +M + V PD TY+ L+
Sbjct: 435 RVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLI 485
Score = 59.7 bits (143), Expect = 2e-07
Identities = 35/111 (31%), Positives = 56/111 (50%)
Frame = +2
Query: 5 TFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSSYTYGSLLKALCYGGNFEEAMKFLNKI 184
T++ +IN +V G A F EM P+ TY +L+ C+ G+FEEA++ L+ +
Sbjct: 340 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 399
Query: 185 RCIPHALDVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLL 337
L+ V Y LL +CK + A LL+ M N+++ YT L+
Sbjct: 400 EAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLI 450
Score = 57.8 bits (138), Expect = 9e-07
Identities = 32/111 (28%), Positives = 51/111 (45%)
Frame = +2
Query: 5 TFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSSYTYGSLLKALCYGGNFEEAMKFLNKI 184
T+ +IN + +GN A M G + Y +L+ C GN EAMK +
Sbjct: 480 TYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVM 539
Query: 185 RCIPHALDVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLL 337
C H D N+L++ +C+ G + A L M ++P+S TY C++
Sbjct: 540 NCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCII 590
Score = 57.4 bits (137), Expect = 1e-06
Identities = 33/111 (29%), Positives = 54/111 (48%)
Frame = +2
Query: 5 TFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSSYTYGSLLKALCYGGNFEEAMKFLNKI 184
TF+ +IN GN KA + ++M G P+ TY +LL C G ++ A++ ++ +
Sbjct: 235 TFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM 294
Query: 185 RCIPHALDVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLL 337
C DV YN+ + +C + A LLK M + P+ TY L+
Sbjct: 295 ICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 345