BLASTX nr result

ID: Atractylodes22_contig00009917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009917
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...    79   1e-12
ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g...    79   1e-12
ref|XP_002331319.1| f-box family protein [Populus trichocarpa] g...    77   3e-12
ref|XP_003602885.1| hypothetical protein MTR_3g100020 [Medicago ...    60   5e-07
ref|XP_002321943.1| f-box family protein [Populus trichocarpa] g...    60   5e-07

>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 22/166 (13%)
 Frame = +1

Query: 4   FNVSAPRLENLSIKNCFLH------KLFISAPNLSSFVYNGDYPLSLSTNGLQYLEKVDL 165
           FN+ A  L++L I N          K+ + AP L+SF ++G+ PL  S   L  L+ V++
Sbjct: 211 FNIHALNLKSLEILNWRYSRIMRGCKVMLFAPKLTSFKFDGNTPLFWSEVNLTSLDDVNV 270

Query: 166 HLR-----------IPSPHSTFKEEDARQ-----LVKLLKDFRNAKFLNLYSDVIESLSL 297
            L+           +        E++ +Q     L+K+L  F +AK L L  ++IE LS 
Sbjct: 271 VLQRYYYRHDYQFYVDEDEYISGEDETKQGFCLDLLKMLHQFCSAKSLTLSMNIIEVLSK 330

Query: 298 YPDLLSSQPSPFHNMKHLNIHEVFHKEEHTKLTLPNHVRNYFLHSS 435
            P  L+  PSPF N+K+L +     K +H  +TLP HV NYFL SS
Sbjct: 331 VPAALNKHPSPFSNLKYLKL-----KTDHKDVTLPAHVLNYFLSSS 371


>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
           gi|222873903|gb|EEF11034.1| f-box family protein
           [Populus trichocarpa]
          Length = 453

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 59/166 (35%), Positives = 85/166 (51%), Gaps = 22/166 (13%)
 Frame = +1

Query: 4   FNVSAPRLENLSIKNCFLH------KLFISAPNLSSFVYNGDYPLSLSTNGLQYLEKVDL 165
           FN+ A  L++L I N   +      K+ + AP L+SF ++G+ PL  S   L  L+ V++
Sbjct: 230 FNIHALSLKSLEILNWRYNRIKQGCKVMLVAPKLTSFKFDGNTPLFWSDVNLTSLDDVNV 289

Query: 166 HL-RIPSPHST---------FKEEDARQ------LVKLLKDFRNAKFLNLYSDVIESLSL 297
            L R    H+            EED  +      L+K+L  F +AK L L  ++IE LS 
Sbjct: 290 VLQRYHHSHNYPFYVVEDEYISEEDETEQGLGLNLIKMLHQFCSAKSLTLSMNIIEILSE 349

Query: 298 YPDLLSSQPSPFHNMKHLNIHEVFHKEEHTKLTLPNHVRNYFLHSS 435
            P  L   PSPF N+K+L +     K +H  +TLP HV NYFL S+
Sbjct: 350 VPAALDKHPSPFSNLKYLKL-----KTDHKDVTLPAHVLNYFLRSA 390


>ref|XP_002331319.1| f-box family protein [Populus trichocarpa]
           gi|222873902|gb|EEF11033.1| f-box family protein
           [Populus trichocarpa]
          Length = 453

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 59/166 (35%), Positives = 83/166 (50%), Gaps = 22/166 (13%)
 Frame = +1

Query: 4   FNVSAPRLENLSIKNCFLH------KLFISAPNLSSFVYNGDYPLSLSTNGLQYLEKVDL 165
           FN+ A  L++L I N          K+ + AP L+SF + G+ PL  S   L  L+ V++
Sbjct: 230 FNIHALNLKSLEILNWRYGRIMRGCKVMLFAPKLTSFKFYGNTPLFWSEVNLTSLDDVNV 289

Query: 166 HL-RIPSPHST---------FKEEDARQ------LVKLLKDFRNAKFLNLYSDVIESLSL 297
            L R    H+            EED  +      L+K+L  F +AK L L  ++IE LS 
Sbjct: 290 VLQRYQHSHNYPFYVVEDEYISEEDETEQGLGLNLIKMLHQFCSAKSLTLSMNIIEILSE 349

Query: 298 YPDLLSSQPSPFHNMKHLNIHEVFHKEEHTKLTLPNHVRNYFLHSS 435
            P  L   PSPF N+K+L +     K +H  +TLP HV NYFL S+
Sbjct: 350 VPAALDKHPSPFSNLKYLKL-----KTDHKDVTLPAHVLNYFLRSA 390


>ref|XP_003602885.1| hypothetical protein MTR_3g100020 [Medicago truncatula]
           gi|355491933|gb|AES73136.1| hypothetical protein
           MTR_3g100020 [Medicago truncatula]
          Length = 378

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
 Frame = +1

Query: 10  VSAPRLENLSIKNCFL--HKLFISAPNLSSFVYNGDYPLSLSTNGLQYLEKVDLHLRIPS 183
           VS+  L NL++ N F   +K  +  P+L +FV++G     LS N +  L+ V++H  I S
Sbjct: 226 VSSTTLVNLTVYNHFYSYYKFDLCTPSLCTFVFSGTPFQKLSANNVSSLKHVEIHAEIIS 285

Query: 184 PHSTFKEEDARQLVKLLKDFRNAKFLNLYSDVIESLSLYPDLLSSQPSPFHNMKHLNI 357
               F E+ +R L   L++F N K L + ++ ++ LSL P LL+       N+K L +
Sbjct: 286 ----FSEDPSRFLFNWLQEFANMKSLKVSTNTLQVLSLSPSLLNYNLLSLGNLKSLKV 339


>ref|XP_002321943.1| f-box family protein [Populus trichocarpa]
           gi|222868939|gb|EEF06070.1| f-box family protein
           [Populus trichocarpa]
          Length = 360

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 7/155 (4%)
 Frame = +1

Query: 1   VFNVSAPRLENLSIKNC-------FLHKLFISAPNLSSFVYNGDYPLSLSTNGLQYLEKV 159
           V  +S  +L NL I           L+++ I AP L SFVY   + +  S   L  L   
Sbjct: 207 VLKISGLQLLNLEIVGLGYMNLAGLLYRIDIFAPKLISFVYKLSHVVDFSGLHLPSLNIA 266

Query: 160 DLHLRIPSPHSTFKEEDARQLVKLLKDFRNAKFLNLYSDVIESLSLYPDLLSSQPSPFHN 339
            +H+         K+E    L+ + K   NA+ + L+S  IE L  +P LL  +PSPF  
Sbjct: 267 RVHVCTKQDK---KKEAYLGLINMFKGLGNAQSVMLHSQTIEVLGSFPGLLEQEPSPFKR 323

Query: 340 MKHLNIHEVFHKEEHTKLTLPNHVRNYFLHSSPSA 444
           +K L +        + K  +P HV  Y L  +P A
Sbjct: 324 LKSLQV------APNNKPFVPPHVMTYLLGGTPLA 352


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