BLASTX nr result

ID: Atractylodes22_contig00009907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009907
         (1310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632552.1| PREDICTED: probable ADP-ribosylation factor ...   231   2e-58
emb|CBI31191.3| unnamed protein product [Vitis vinifera]              224   3e-56
emb|CAN66445.1| hypothetical protein VITISV_003574 [Vitis vinifera]   201   3e-49
ref|XP_002530953.1| HIV-1 rev binding protein, hrbl, putative [R...   175   2e-41
ref|XP_002319204.1| predicted protein [Populus trichocarpa] gi|2...   164   4e-38

>ref|XP_003632552.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein
            AGD14-like [Vitis vinifera]
          Length = 677

 Score =  231 bits (590), Expect = 2e-58
 Identities = 144/363 (39%), Positives = 184/363 (50%), Gaps = 32/363 (8%)
 Frame = -1

Query: 1295 NKDSTLPSLSHSLESVKFDGLDLFSAPYAPQSTTSVPSATDLFESSATSSALSINTLQPP 1116
            +K S L +L  S  S     LDLF AP+AP++ TS  S+ DLF+   TSS  S++  Q  
Sbjct: 314  DKISELHALPRSSVSGYPVSLDLFDAPFAPETVTSSASSIDLFQLPVTSSVPSVDLFQQS 373

Query: 1115 HNSEASTLGVNQQFQAFEPSSLDLFAAVPQQQSAETLKDKSPDMFTQKNEGWARFDMPWH 936
              S  S++  +Q  Q   PS+ D FA + QQQSA TL  K P++   KNEGWA FD P  
Sbjct: 374  SVSSVSSMNPHQASQTSPPSAFDFFAEINQQQSAATLHQKLPELSVPKNEGWATFDTPTP 433

Query: 935  VEPSQGIKSSIDVSE-TSTGAEFLGKFDQALPLDESSHWSFNQDFSANGPSSLMHNPWHG 759
            +    G   +   ++  ST     GK D  L +D S  W   QD +A+GPSS M NPW  
Sbjct: 434  MTSIAGTTENCTPAKIPSTDGGPPGKLDSVLSIDASMQWPLFQDSNAHGPSSSMSNPWDQ 493

Query: 758  GLHDLGDPLNAKNN--XXXXXXXXXXXXXXSIHTKSSEQVPVQDPSVADAYLTWGISED- 588
            GLH++    N  +                 SI   S   V V  PS AD +L   + ED 
Sbjct: 494  GLHNVQASANVTSTPLWNAFEDAIGHLSLGSIQQSSEPHVAVSKPSTADQFLGSRVLEDP 553

Query: 587  -------------------GAQSHGLDTKSRNPFDLPSGADLESSNIFLDMNSLQSALPN 465
                               G QS G D KS NPFDLP  +DLE S++FLDM+SLQ+ALP+
Sbjct: 554  DNDGIQRAASAGGPSLPSGGTQSQGTDKKSSNPFDLPYDSDLEQSSMFLDMSSLQAALPS 613

Query: 464  H---------SMSTPWFPESAAIPYAPGKSQDALVYMAGQAPSMQIPNIQAQGHVASISG 312
            +          ++ PWFP+    PY P   Q  L Y+AG  PS Q+PN Q QG VASI G
Sbjct: 614  NPQLPSVFLGGVTQPWFPQKPVTPYIPAAPQGGLAYVAGSTPSSQLPNGQTQGPVASIGG 673

Query: 311  NPF 303
            NPF
Sbjct: 674  NPF 676


>emb|CBI31191.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  224 bits (572), Expect = 3e-56
 Identities = 144/381 (37%), Positives = 184/381 (48%), Gaps = 50/381 (13%)
 Frame = -1

Query: 1295 NKDSTLPSLSHSLESVKFDGLDLFSAPYAPQSTTSVPSATDLFESSATSSALSINTLQPP 1116
            +K S L +L  S  S     LDLF AP+AP++ TS  S+ DLF+   TSS  S++  Q  
Sbjct: 314  DKISELHALPRSSVSGYPVSLDLFDAPFAPETVTSSASSIDLFQLPVTSSVPSVDLFQQS 373

Query: 1115 HNSEASTLGVNQQFQAFEPSSLDLFAAVPQQQSAETLKDKSPDMFTQKNEGWARFDMPWH 936
              S  S++  +Q  Q   PS+ D FA + QQQSA TL  K P++   KNEGWA FD P  
Sbjct: 374  SVSSVSSMNPHQASQTSPPSAFDFFAEINQQQSAATLHQKLPELSVPKNEGWATFDTPTP 433

Query: 935  VEPSQGIKSSIDVSE-TSTGAEFLGKFDQALPLDESSHWSFNQDFSANGPSSLMHNPWHG 759
            +    G   +   ++  ST     GK D  L +D S  W   QD +A+GPSS M NPW  
Sbjct: 434  MTSIAGTTENCTPAKIPSTDGGPPGKLDSVLSIDASMQWPLFQDSNAHGPSSSMSNPWDQ 493

Query: 758  GLHDLGDPLNAKNN--XXXXXXXXXXXXXXSIHTKSSEQVPVQDPSVADAYLTWGISED- 588
            GLH++    N  +                 SI   S   V V  PS AD +L   + ED 
Sbjct: 494  GLHNVQASANVTSTPLWNAFEDAIGHLSLGSIQQSSEPHVAVSKPSTADQFLGSRVLEDP 553

Query: 587  -------------------------------------GAQSHGLDTKSRNPFDLPSGADL 519
                                                 G QS G D KS NPFDLP  +DL
Sbjct: 554  DNDGIQRAASAGGPSLPSVPTHVTGPPDAPSELALMGGTQSQGTDKKSSNPFDLPYDSDL 613

Query: 518  ESSNIFLDMNSLQSALPNH---------SMSTPWFPESAAIPYAPGKSQDALVYMAGQAP 366
            E S++FLDM+SLQ+ALP++          ++ PWFP+    PY P   Q  L Y+AG  P
Sbjct: 614  EQSSMFLDMSSLQAALPSNPQLPSVFLGGVTQPWFPQKPVTPYIPAAPQGGLAYVAGSTP 673

Query: 365  SMQIPNIQAQGHVASISGNPF 303
            S Q+PN Q QG VASI GNPF
Sbjct: 674  SSQLPNGQTQGPVASIGGNPF 694


>emb|CAN66445.1| hypothetical protein VITISV_003574 [Vitis vinifera]
          Length = 1290

 Score =  201 bits (511), Expect = 3e-49
 Identities = 134/380 (35%), Positives = 176/380 (46%), Gaps = 50/380 (13%)
 Frame = -1

Query: 1295 NKDSTLPSLSHSLESVKFDGLDLFSAPYAPQSTTSVPSATDLFESSATSSALSINTLQPP 1116
            +K S L +L  S  S     LDLF AP+AP++ TS  S+ DLF+   TSS  S++  Q  
Sbjct: 819  DKISELHALPRSSVSGYPVSLDLFDAPFAPETVTSSASSIDLFQLPVTSSVPSVDLFQQS 878

Query: 1115 HNSEASTLGVNQQFQAFEPSSLDLFAAVPQQQSAETLKDKSPDMFTQKNEGWARFDMPWH 936
              S  S++  +Q  Q   P + D FA + QQQSA TL  K P++   KNEGWA FD P  
Sbjct: 879  SVSSVSSMNPHQASQTSPPXAFDFFAEINQQQSAATLHQKLPELSVPKNEGWATFDTPTP 938

Query: 935  VEPSQGIKSSIDVSE-TSTGAEFLGKFDQALPLDESSHWSFNQDFSANGPSSLMHNPWHG 759
            +    G   +   ++  ST     GK D  L +D S  W   QD +A+GPSS M NPW  
Sbjct: 939  MTSIAGTTENCTPAKIPSTDGGPPGKLDSVLSIDASMQWPLFQDSNAHGPSSSMSNPWDQ 998

Query: 758  GLHDLGDPLNAKNN--XXXXXXXXXXXXXXSIHTKSSEQVPVQDPSVADAYLTWGISED- 588
            GLH++    N  +                 SI   S   V V  PS AD +L   + ED 
Sbjct: 999  GLHNVQASANVTSTPLWNAFEDAIGHLSLGSIQQSSEPHVAVSKPSTADQFLGSRVLEDP 1058

Query: 587  -------------------------------------GAQSHGLDTKSRNPFDLPSGADL 519
                                                 G QS G D KS NPFDLP  +DL
Sbjct: 1059 DNDGIQRAASAGGPPLPSVPTHVTGPPDAPSELALVGGTQSQGTDKKSSNPFDLPYDSDL 1118

Query: 518  ESSNIFLDMNSLQSALPNH---------SMSTPWFPESAAIPYAPGKSQDALVYMAGQAP 366
            E S++ LDM+SLQ+ALP++          ++ PWFP+    PY P   Q  L Y+AG  P
Sbjct: 1119 EQSSMXLDMSSLQAALPSNPQLPSAFLGGVTQPWFPQKPVTPYIPAAPQGGLAYVAGSTP 1178

Query: 365  SMQIPNIQAQGHVASISGNP 306
            S Q+P     GH A ++  P
Sbjct: 1179 SSQLP-----GHYALVTQQP 1193


>ref|XP_002530953.1| HIV-1 rev binding protein, hrbl, putative [Ricinus communis]
            gi|223529468|gb|EEF31425.1| HIV-1 rev binding protein,
            hrbl, putative [Ricinus communis]
          Length = 692

 Score =  175 bits (444), Expect = 2e-41
 Identities = 124/379 (32%), Positives = 168/379 (44%), Gaps = 53/379 (13%)
 Frame = -1

Query: 1280 LPSLSHSLESVKFDGLDLFSAPYAPQSTTSVPSATDLFESSATSSALSINTLQPPHNSEA 1101
            +P+      S  +D LD F AP  P++  SV S  DLF+ SATS A  +N  +      A
Sbjct: 321  MPTFQRMAGSGSYDSLDHFKAPVVPKADASVGSPIDLFQLSATSPAPPVNLFEISPLDPA 380

Query: 1100 STLGVNQQFQAFEPSSLDLFAAVPQQQSAETLKDKSPDMFTQKNEGWARFDMPWHVEPSQ 921
              +   Q  Q   PSS+DLF  + QQQS  ++   SP++   KNEGWA FD    ++P+ 
Sbjct: 381  PAMNAYQTPQTSLPSSIDLFGGITQQQSINSVDQNSPELSIPKNEGWATFD----IQPTT 436

Query: 920  GIKSSIDVSE--TSTGAEFLGKFDQALPLDESSHWSFNQDFSANGPSSLMHNPWHGGLHD 747
              + + +++    ST      +FDQ    D+   W   Q+ S    S+    PW+ GLH+
Sbjct: 437  STQGNGNLTPFVISTSMYSSAQFDQVSSSDKGMQWPPFQNSSVE-ESASGSAPWNNGLHN 495

Query: 746  LGDPLNAKNNXXXXXXXXXXXXXXSIHTKSS-EQVPVQDPSVADAYLTWGISED------ 588
            +  P N                     T+SS +QV    PS  D       SED      
Sbjct: 496  VEVPDNTSAQTWNAFEDSVTHLSLEGTTQSSIQQVAASMPSTGDQSSGLKASEDPSRDGI 555

Query: 587  -----------------------------------GAQSHGLDTKSRNPFDLPSGADLES 513
                                                AQSH  + KS NPFDLP  ++LE 
Sbjct: 556  KRVAPHGQGELSGLDGQSDILLEPSYTPPANPIMEPAQSHANNHKSNNPFDLPYDSELEP 615

Query: 512  SNIFLDMNSLQSALPN---------HSMSTPWFPESAAIPYAPGKSQDALVYMAGQAPSM 360
             N+FLDM+SLQ+ALP+           M+ PWFP+     Y P   Q  L YM GQAP+ 
Sbjct: 616  GNMFLDMSSLQAALPDAHLQSAFLGSGMTEPWFPQDPVTTYVPAAPQGGLAYMGGQAPN- 674

Query: 359  QIPNIQAQGHVASISGNPF 303
              PN+Q QG VA + GNPF
Sbjct: 675  --PNVQTQGPVAFVGGNPF 691


>ref|XP_002319204.1| predicted protein [Populus trichocarpa] gi|222857580|gb|EEE95127.1|
            predicted protein [Populus trichocarpa]
          Length = 672

 Score =  164 bits (416), Expect = 4e-38
 Identities = 124/359 (34%), Positives = 170/359 (47%), Gaps = 48/359 (13%)
 Frame = -1

Query: 1235 LDLFSAPYAPQSTTSVPSATDLFESSATSSALSINTLQPPHNSEASTLGVNQQFQAFEPS 1056
            LDLF  P AP+  + +    DLF+  ATS A S++  Q P    AS++ + Q  Q   PS
Sbjct: 327  LDLFKEPVAPEPASPMAPPIDLFQLPATSPAPSVDLFQVP---PASSINLYQPSQTSLPS 383

Query: 1055 SLDLFAAVPQQQSAETLKDKSPDMFTQKNEGWARFDMPWHVEPSQG---IKSSIDVSETS 885
            +L  +    QQQS  +L +KSP     KNEGWA FD P  +  + G   + SS+  S   
Sbjct: 384  TLGSY----QQQSVTSLDEKSPHSSLPKNEGWATFDGPQPIASTPGPENLTSSVGPSNAG 439

Query: 884  TGAEFLGKFDQALPLDESSHWSFNQDFSANGPSSLMHNPWHGGLHDLGDPLNAKNNXXXX 705
            +       FDQ   L  S  W   Q+ S +  SS + +PW G +H +    N  +     
Sbjct: 440  S-----SNFDQVPSLHTSMQWPPFQN-SVDHSSSSVPDPWLGDVHSVQATGNTSSQNWSA 493

Query: 704  XXXXXXXXXXSIH--TKSSEQVPVQDPS-VADAYLT---WGISEDGAQ------------ 579
                       +    +SSE   + +PS  AD  +       ++DG Q            
Sbjct: 494  FEFDDSVAGIPLEGIKQSSEPQTLYNPSPTADQLINCVLQDFNKDGIQRTAYNGVLPGPS 553

Query: 578  -------------------SHGLDTKSRNPFDLPSGADLESSNIFLDMNSLQSALPNHS- 459
                               SH  D KS NPFDLP  +DLE SN+F+DM+SL++ALPN + 
Sbjct: 554  EPSDIVAGPSYTPSGHPLVSHA-DHKSINPFDLPYESDLEPSNMFVDMSSLEAALPNANS 612

Query: 458  -------MSTPWFPESAAIPYAPGKSQDALVYMAGQAPSMQIPNIQAQGHVASISGNPF 303
                   ++ PWFP+  A+ Y P   Q  L YMAGQAPS Q+ N+Q QG VAS+ GNPF
Sbjct: 613  PSSFLGGVTQPWFPQDLAMTYIPAAPQGGLAYMAGQAPSPQLGNVQTQGPVASVGGNPF 671


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