BLASTX nr result

ID: Atractylodes22_contig00009871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009871
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323932.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus ...   107   1e-21
ref|XP_003532599.1| PREDICTED: KH domain-containing protein At4g...   106   2e-21
ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g...   105   4e-21
ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [...   103   2e-20

>ref|XP_002323932.1| predicted protein [Populus trichocarpa] gi|222866934|gb|EEF04065.1|
           predicted protein [Populus trichocarpa]
          Length = 722

 Score =  108 bits (271), Expect = 3e-22
 Identities = 66/128 (51%), Positives = 71/128 (55%)
 Frame = -3

Query: 487 GGRSAIVTNTTVEILVPANVIGSVYGENGSNLTRLRQPNNIFLHSLQSGE*WLAVAY*RR 308
           GG+SA VTNTTVEI+VP N  GSVYGENGSN                             
Sbjct: 641 GGKSAFVTNTTVEIVVPENAFGSVYGENGSN----------------------------- 671

Query: 307 TWXXXXXXXXXXXVK*XNLTRLRQISGAKVVVHEPGPGTTDHIVVISGTPDETQSAQSLL 128
                             L RLRQISGAKV+VHEP  GT+D IVVISGTPDETQ+AQSLL
Sbjct: 672 ------------------LARLRQISGAKVIVHEPRLGTSDRIVVISGTPDETQAAQSLL 713

Query: 127 QAFILADQ 104
           QAFIL  Q
Sbjct: 714 QAFILTGQ 721


>ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223538165|gb|EEF39776.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 698

 Score =  107 bits (267), Expect = 1e-21
 Identities = 66/128 (51%), Positives = 72/128 (56%)
 Frame = -3

Query: 487 GGRSAIVTNTTVEILVPANVIGSVYGENGSNLTRLRQPNNIFLHSLQSGE*WLAVAY*RR 308
           G +SAIVTNTTVEI VP NVIGSVYGEN SN                             
Sbjct: 616 GSKSAIVTNTTVEIRVPENVIGSVYGENDSN----------------------------- 646

Query: 307 TWXXXXXXXXXXXVK*XNLTRLRQISGAKVVVHEPGPGTTDHIVVISGTPDETQSAQSLL 128
                             LTRLRQISGAKV+VHEP  G++D I+VISGTPDETQ+AQSLL
Sbjct: 647 ------------------LTRLRQISGAKVIVHEPRLGSSDRIIVISGTPDETQAAQSLL 688

Query: 127 QAFILADQ 104
           QAFIL  Q
Sbjct: 689 QAFILTGQ 696


>ref|XP_003532599.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 433

 Score =  106 bits (264), Expect = 2e-21
 Identities = 62/126 (49%), Positives = 73/126 (57%)
 Frame = -3

Query: 487 GGRSAIVTNTTVEILVPANVIGSVYGENGSNLTRLRQPNNIFLHSLQSGE*WLAVAY*RR 308
           G ++AIVTNTTV+I+VP +VIGSVYGENGSN                             
Sbjct: 352 GSKTAIVTNTTVQIVVPDDVIGSVYGENGSN----------------------------- 382

Query: 307 TWXXXXXXXXXXXVK*XNLTRLRQISGAKVVVHEPGPGTTDHIVVISGTPDETQSAQSLL 128
                             L RLRQISGAKV+VHEP PGT+D  ++ISGTPDET++AQSLL
Sbjct: 383 ------------------LARLRQISGAKVIVHEPRPGTSDRTIIISGTPDETRAAQSLL 424

Query: 127 QAFILA 110
           QAFILA
Sbjct: 425 QAFILA 430


>ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 591

 Score =  105 bits (262), Expect = 4e-21
 Identities = 62/126 (49%), Positives = 72/126 (57%)
 Frame = -3

Query: 487 GGRSAIVTNTTVEILVPANVIGSVYGENGSNLTRLRQPNNIFLHSLQSGE*WLAVAY*RR 308
           G ++AIVTNTTV+I VP +VIGSVYGENGSN                             
Sbjct: 510 GSKTAIVTNTTVQIAVPDDVIGSVYGENGSN----------------------------- 540

Query: 307 TWXXXXXXXXXXXVK*XNLTRLRQISGAKVVVHEPGPGTTDHIVVISGTPDETQSAQSLL 128
                             L RLRQISGAKV+VHEP PGT+D  ++ISGTPDET++AQSLL
Sbjct: 541 ------------------LARLRQISGAKVIVHEPRPGTSDRTIIISGTPDETRAAQSLL 582

Query: 127 QAFILA 110
           QAFILA
Sbjct: 583 QAFILA 588


>ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 663

 Score =  103 bits (256), Expect = 2e-20
 Identities = 62/126 (49%), Positives = 70/126 (55%)
 Frame = -3

Query: 487 GGRSAIVTNTTVEILVPANVIGSVYGENGSNLTRLRQPNNIFLHSLQSGE*WLAVAY*RR 308
           G +SAIVTNTTVEI+VP + I  VYGENG N                             
Sbjct: 583 GSKSAIVTNTTVEIVVPDDTIDCVYGENGRN----------------------------- 613

Query: 307 TWXXXXXXXXXXXVK*XNLTRLRQISGAKVVVHEPGPGTTDHIVVISGTPDETQSAQSLL 128
                             L RLRQISGAKVV+HEP PGT+D I+VISGTPDETQ+AQSLL
Sbjct: 614 ------------------LVRLRQISGAKVVIHEPRPGTSDRIIVISGTPDETQAAQSLL 655

Query: 127 QAFILA 110
           QAFIL+
Sbjct: 656 QAFILS 661


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