BLASTX nr result
ID: Atractylodes22_contig00009845
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00009845
(1843 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chlorop... 575 e-161
ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa... 570 e-160
gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo] 560 e-157
ref|NP_173754.2| CRS2-associated factor 2 [Arabidopsis thaliana]... 556 e-156
ref|XP_002893285.1| hypothetical protein ARALYDRAFT_335585 [Arab... 556 e-156
>ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
gi|297739063|emb|CBI28552.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 575 bits (1481), Expect = e-161
Identities = 293/440 (66%), Positives = 338/440 (76%), Gaps = 9/440 (2%)
Frame = +2
Query: 206 PAFKTFHRRSKYYKPXXXXXXXXXXXXXXXXXXXXXXXYQLPGAPFEFQYSYSEIPRVKP 385
PAFKT H RSKYYKP Y LPGAPFEFQ+SYSE P+ KP
Sbjct: 60 PAFKTVHHRSKYYKPVSDGVIASDGDRSVVIGESGVS-YLLPGAPFEFQFSYSETPKAKP 118
Query: 386 IAIREPAFLPFAPPTMPRPWTGKAPLKKSTRKIKLFEPLNPGNNGTQ----LEMLKPYEL 553
+AIREPAFLPFAPPTMPRPWTGKAPLKKS +KI LF+ NP GT+ +EM P+ L
Sbjct: 119 LAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRVEMPGPFPL 178
Query: 554 GNFEV--RPREEVLGKPLSRAERQELVKRHISSNRQVNLGRDGLTHNMLELIHSHWRRDP 727
G F V R REE+LG+PLS+AE + LVK ++S NRQVNLGRDGLTHNMLELIHSHW+R
Sbjct: 179 GKFPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKRQR 238
Query: 728 VCKVRCLGVPTVDMKNLYRVLQEKTGGKIILRTGGVLYLFRGRHYDPHNRPQYPVMLWKP 907
VCKVRC GVPT+DM N+ L+EKTGGKII R GGV+YLFRGR+Y+ RPQYPVMLWKP
Sbjct: 239 VCKVRCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLWKP 298
Query: 908 AAPVYPKLIQEVPEGLTKEEADELRMKGKNLPPICKLAKNGVYITLVKDVRQAFEESSLV 1087
AAPVYPKLIQE PEGLTK EADELRMKGKNL PIC+L KNGVYI+LVKDVR AFE S LV
Sbjct: 299 AAPVYPKLIQEAPEGLTKFEADELRMKGKNLIPICRLVKNGVYISLVKDVRDAFEGSPLV 358
Query: 1088 KIDCRGMHASDYKKLGAKLKELVPCVLLSFDDEQILIWRGRDWKSMYHGAPISLTHTFDN 1267
KIDC+GMHASDYKK+GAKLKELVPCVLLSFDDEQIL WRG WKSMY GAP L +
Sbjct: 359 KIDCKGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGHGWKSMYQGAPSFLIPVVAD 418
Query: 1268 IANDPSCS---KNTEVGSETRTLVSSPRMMSLWRRAIESNKAMLLEDIGVGPDDLLKVVE 1438
+A+ S K+ +T+ + +SP+MMSLW+ AIES+KA+LL++ G+GPD LLKVVE
Sbjct: 419 VASGLEGSGIPKSNHHRLDTKAVSASPKMMSLWKSAIESSKALLLDETGLGPDALLKVVE 478
Query: 1439 EFETVSLVTEHSYHAVIVSN 1498
EFE +S TEHSY A+++S+
Sbjct: 479 EFEGISQATEHSYPALVMSS 498
>ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Vitis vinifera]
Length = 560
Score = 570 bits (1469), Expect = e-160
Identities = 306/514 (59%), Positives = 354/514 (68%), Gaps = 27/514 (5%)
Frame = +2
Query: 182 SQKQPQ-----SNPAFKTFHRRSKYYKPXXXXXXXXXXXXXXXXXXXXXXXYQLPGAPFE 346
SQK P+ S PAFKT H RSKYYKP Y L GAPFE
Sbjct: 47 SQKSPRPPTKPSTPAFKTVHHRSKYYKPVSDGVIASDGDRSVVIGESGVS-YLLAGAPFE 105
Query: 347 FQYSYSEIPRVKPIAIREPAFLPFAPPTMPRPWTGKAPLKKSTRKIKLFEPLNPGNNGTQ 526
FQ+SYSE P+ KP+AIREPAFLPFAPPTMPRPWTGKAPLKKS +KI LF+ NP GT+
Sbjct: 106 FQFSYSETPKAKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTK 165
Query: 527 ----LEMLKPYELGNFEV--RPREEVLGKPLSRAERQELVKRHISSNRQVNLGRDGLTHN 688
+EM P+ LG F V R REE+LG+PLS+AE + LVK ++S NRQVNLGRDGLTHN
Sbjct: 166 GVKRVEMPGPFPLGKFPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVNLGRDGLTHN 225
Query: 689 MLELIHSHWRRDPVCKVRCLGVPTVDMKNLYRVLQEKTGGKIILRTGGVLYLFRGRHYDP 868
MLELIHSHW+R VCKV C GVPT+DM N+ L+EKTGGKII R GGV+YLFRGR+Y+
Sbjct: 226 MLELIHSHWKRQRVCKVWCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNYNY 285
Query: 869 HNRPQYPVMLWKPAAPVYPKLIQEVPEGLTKEEADELRMKGKNLPPICKLAKNGVYITLV 1048
RPQYPVMLWKPAAPVYPKLIQE PEGLTK EADELRMKG NL PIC+L KNGVYI+LV
Sbjct: 286 RTRPQYPVMLWKPAAPVYPKLIQEAPEGLTKFEADELRMKGXNLIPICRLVKNGVYISLV 345
Query: 1049 KDVRQAFEESSLVKIDCRGMHASDYKKLGAKLKELVPCVLLSFDDEQILIWRGRDWKSMY 1228
KDVR AFE S LVKIDC+GMHASDYKK+GAKLKE VPCVLLSFDDEQIL WRG WKSMY
Sbjct: 346 KDVRDAFEGSPLVKIDCKGMHASDYKKIGAKLKESVPCVLLSFDDEQILTWRGHGWKSMY 405
Query: 1229 HGAPISLTHTFDNIANDPSCS---KNTEVGSETRTLVSSPRMMSLWRRAIESNKAMLLED 1399
GAP L ++A+ S K+ +T+ + +SP+MMSLW+ AIES+KA+LL++
Sbjct: 406 QGAPSFLIPVVADVASGLEGSGVPKSNHHRLDTKAVSASPKMMSLWKSAIESSKALLLDE 465
Query: 1400 IGVGPDDLLKVVEEFETVSLVTEHSYHAVIVSN-------------XXXXXXXXXXXXXX 1540
IG+GPD LLKVVEEFE +S TEHSY A+++S+
Sbjct: 466 IGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEHEGYNSEDYSEDEMYND 525
Query: 1541 XXXXXXXXXXXXXXXKSAPPGSLPVDFLAEQLSD 1642
P GSLPVD LA+QL +
Sbjct: 526 DDDEYLVNESLEEMESPVPLGSLPVDLLAKQLGE 559
>gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
Length = 603
Score = 560 bits (1444), Expect = e-157
Identities = 298/498 (59%), Positives = 348/498 (69%), Gaps = 19/498 (3%)
Frame = +2
Query: 203 NPAFKTFHRRSKYYKPXXXXXXXXXXXXXXXXXXXXXXXYQLPGAPFEFQYSYSEIPRVK 382
NPA KTFHRRSKYYKP Y LPGAPFEFQYSYSE P VK
Sbjct: 105 NPALKTFHRRSKYYKPVKDGVISSNGERAVVIGDSGVS-YLLPGAPFEFQYSYSETPNVK 163
Query: 383 PIAIREPAFLPFAPPTMPRPWTGKAPLKKSTRKIKLFEPLNPGNNGT----QLEMLKPYE 550
PIAIREPAFLPFAPPTMPRPWTGKAPLK S +KI LF+ NP GT Q+++ P+
Sbjct: 164 PIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQLPGPFP 223
Query: 551 LGNF--EVRPREEVLGKPLSRAERQELVKRHISSNRQVNLGRDGLTHNMLELIHSHWRRD 724
LG + E + REE+LG+PL E + LVK H+S NRQVNLGRDGLTHNMLELIHSHW+R
Sbjct: 224 LGQYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQ 283
Query: 725 PVCKVRCLGVPTVDMKNLYRVLQEKTGGKIILRTGGVLYLFRGRHYDPHNRPQYPVMLWK 904
VCKVRC GVPTVDM N+ ++EKTGGKII R GGVLYLFRGR+Y+ RPQYPVMLWK
Sbjct: 284 RVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWK 343
Query: 905 PAAPVYPKLIQEVPEGLTKEEADELRMKGKNLPPICKLAKNGVYITLVKDVRQAFEESSL 1084
PAAPVYPKLIQE PEGLTKEEA+ELRMKGKNL PICKLAKNGVYI+LV DVR AFE S L
Sbjct: 344 PAAPVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVRHAFEGSIL 403
Query: 1085 VKIDCRGMHASDYKKLGAKLKELVPCVLLSFDDEQILIWRGRDWKSMY---HGAPI-SLT 1252
VKIDC GMH SDYKKLGAKLKELVPCVLLSFD+EQIL+WRG+DWKS+ AP+ S
Sbjct: 404 VKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDRSAPLPSRA 463
Query: 1253 HTFDNIANDPSCSKNTE-VGSETRTLVSSPRMMSLWRRAIESNKAMLLEDIGVGPDDLLK 1429
+ D++ + +N++ + T+ +SP+M LW RAI+SNKA++L++IG+ PD+LL+
Sbjct: 464 SSNDSLGSSGESVENSDLLNGNHHTIKTSPKMKLLWERAIDSNKALMLDEIGLAPDELLE 523
Query: 1430 VVEEFETVSLVTEHSYHAVIVSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKS------ 1591
VEEFE +S TEHSY A I S+ +
Sbjct: 524 RVEEFERISQATEHSYPAFITSSEEVSSPADSPESQDHSEANYNSDDDVGREEDLFDNVD 583
Query: 1592 --APPGSLPVDFLAEQLS 1639
P GSLPVD +A++LS
Sbjct: 584 PLVPLGSLPVDIIAKKLS 601
>ref|NP_173754.2| CRS2-associated factor 2 [Arabidopsis thaliana]
gi|75173812|sp|Q9LDA9.1|CAF2P_ARATH RecName:
Full=CRS2-associated factor 2, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 2; Flags: Precursor
gi|8778588|gb|AAF79596.1|AC007945_16 F28C11.4
[Arabidopsis thaliana]
gi|9295699|gb|AAF87005.1|AC005292_14 F26F24.27
[Arabidopsis thaliana] gi|17065312|gb|AAL32810.1| Unknown
protein [Arabidopsis thaliana] gi|21387129|gb|AAM47968.1|
unknown protein [Arabidopsis thaliana]
gi|332192262|gb|AEE30383.1| CRS2-associated factor 2
[Arabidopsis thaliana]
Length = 564
Score = 556 bits (1433), Expect = e-156
Identities = 283/446 (63%), Positives = 338/446 (75%), Gaps = 9/446 (2%)
Frame = +2
Query: 188 KQPQSNPAFKTFHRRSKYYKPXXXXXXXXXXXXXXXXXXXXXXXYQLPGAPFEFQYSYSE 367
K+PQSNPA K H R++YYKP YQLPGAPFEFQ+SYSE
Sbjct: 61 KKPQSNPALKLPHHRTRYYKPVKEGVISSDGDRTILIGDSGVS-YQLPGAPFEFQFSYSE 119
Query: 368 IPRVKPIAIREPAFLPFAPPTMPRPWTGKAPLKKSTRKIKLFEPLNP---GNNGTQ-LEM 535
P+VKP+ IREPAF+PFAPPTMPRPWTGKAPLKKS +KI LF+ NP G +G + +EM
Sbjct: 120 TPKVKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEM 179
Query: 536 LKPYELGNF--EVRPREEVLGKPLSRAERQELVKRHISSNRQVNLGRDGLTHNMLELIHS 709
P G + E REEVLG+PL R E+ L+K H+ NRQVNLGRDG THNMLELIHS
Sbjct: 180 PGPLPFGRYPKEGMNREEVLGEPLKRWEKGMLIKPHMHDNRQVNLGRDGFTHNMLELIHS 239
Query: 710 HWRRDPVCKVRCLGVPTVDMKNLYRVLQEKTGGKIILRTGGVLYLFRGRHYDPHNRPQYP 889
HW+R VCKVRC GVPTVDM N+ RVL+EKTGG+II R GGV+YLFRGR+Y+ RPQYP
Sbjct: 240 HWKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYP 299
Query: 890 VMLWKPAAPVYPKLIQEVPEGLTKEEADELRMKGKNLPPICKLAKNGVYITLVKDVRQAF 1069
+MLWKPAAPVYPKLIQEVPEGLTKEEA E R+KGK+L PICKL+KNGVY++LVKDVR AF
Sbjct: 300 LMLWKPAAPVYPKLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKNGVYVSLVKDVRDAF 359
Query: 1070 EESSLVKIDCRGMHASDYKKLGAKLKELVPCVLLSFDDEQILIWRGRDWKSMYHGAPI-- 1243
E SSLVK+DC G+ SDYKK+GAKLKELVPCVLLSFDDEQIL+WRGR+WKS + P+
Sbjct: 360 ELSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGREWKSRFVDNPLIP 419
Query: 1244 SLTHTFDNIANDPSCSKNTE-VGSETRTLVSSPRMMSLWRRAIESNKAMLLEDIGVGPDD 1420
SL+ T DPS + E + T +SSP+M+SLW+RA+ES+KA++LE++ +GPDD
Sbjct: 420 SLSETNTTNELDPSDKPSEEQTVANPSTTISSPKMISLWQRALESSKAVILEELDLGPDD 479
Query: 1421 LLKVVEEFETVSLVTEHSYHAVIVSN 1498
LLK VEE E SL EH+Y A+++SN
Sbjct: 480 LLKKVEELEGTSLAAEHTYTAMVLSN 505
>ref|XP_002893285.1| hypothetical protein ARALYDRAFT_335585 [Arabidopsis lyrata subsp.
lyrata] gi|297339127|gb|EFH69544.1| hypothetical protein
ARALYDRAFT_335585 [Arabidopsis lyrata subsp. lyrata]
Length = 565
Score = 556 bits (1432), Expect = e-156
Identities = 282/446 (63%), Positives = 339/446 (76%), Gaps = 9/446 (2%)
Frame = +2
Query: 188 KQPQSNPAFKTFHRRSKYYKPXXXXXXXXXXXXXXXXXXXXXXXYQLPGAPFEFQYSYSE 367
K+PQSNPA K H R++YYKP YQLPGAPFEFQ+SYSE
Sbjct: 63 KKPQSNPALKLPHHRTRYYKPVKEGVISSDGDRTIVIGESGVS-YQLPGAPFEFQFSYSE 121
Query: 368 IPRVKPIAIREPAFLPFAPPTMPRPWTGKAPLKKSTRKIKLFEPLNP---GNNGTQ-LEM 535
P+ KP+ IREPAF+PFAPPTMPRPWTGKAPLKKS +KI LF+ NP G +G + +EM
Sbjct: 122 TPKAKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEM 181
Query: 536 LKPYELGNF--EVRPREEVLGKPLSRAERQELVKRHISSNRQVNLGRDGLTHNMLELIHS 709
P G + E REE+LG+PL + E+ L+K H+ NRQVNLGRDG THNMLELIHS
Sbjct: 182 PGPLPFGRYPKEGMNREEILGEPLKKWEKGMLIKPHMHDNRQVNLGRDGFTHNMLELIHS 241
Query: 710 HWRRDPVCKVRCLGVPTVDMKNLYRVLQEKTGGKIILRTGGVLYLFRGRHYDPHNRPQYP 889
HW+R VCKVRC GVPTVDM N+ RVL+EKTGG+II R GGV+YLFRGR+Y+ RPQYP
Sbjct: 242 HWKRRRVCKVRCKGVPTVDMDNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYP 301
Query: 890 VMLWKPAAPVYPKLIQEVPEGLTKEEADELRMKGKNLPPICKLAKNGVYITLVKDVRQAF 1069
+MLWKPAAPVYPKLIQEVPEGLTKEEA E R+KGK+L PICKL+KNGVY++LVKDVR AF
Sbjct: 302 LMLWKPAAPVYPKLIQEVPEGLTKEEALEFRVKGKSLRPICKLSKNGVYVSLVKDVRDAF 361
Query: 1070 EESSLVKIDCRGMHASDYKKLGAKLKELVPCVLLSFDDEQILIWRGRDWKSMYHGAPISL 1249
E S LVK+DC G+ SDYKK+GAKLKELVPCVLLSFDDEQIL+WRGRDWKS + P+
Sbjct: 362 ELSPLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGRDWKSRFVDNPLIP 421
Query: 1250 THTFDNIAN--DPSCSKNTE-VGSETRTLVSSPRMMSLWRRAIESNKAMLLEDIGVGPDD 1420
+ + NIAN DPS + E S+ + +SSP+M+SLW+RA+ES+KA++LE++ +GPDD
Sbjct: 422 SLSETNIANELDPSDKPSDEQTVSDPSSTISSPKMISLWKRALESSKAVILEELDLGPDD 481
Query: 1421 LLKVVEEFETVSLVTEHSYHAVIVSN 1498
LLK VEE E SL EHSY A+++SN
Sbjct: 482 LLKKVEELEGTSLAAEHSYTAMVLSN 507