BLASTX nr result

ID: Atractylodes22_contig00009800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009800
         (1039 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...   439   e-121
ref|XP_003537656.1| PREDICTED: DNA-directed RNA polymerase II su...   427   e-117
ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II su...   422   e-116
ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su...   421   e-115
ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   421   e-115

>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
            vinifera]
          Length = 1848

 Score =  439 bits (1129), Expect = e-121
 Identities = 211/232 (90%), Positives = 223/232 (96%)
 Frame = +1

Query: 343  MDIRFPYSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKVAGLSDPRLGTI 522
            MD+RFPYSPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK  GLSDPRLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 523  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 702
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEE+HK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 703  FKQAQKIRNPKNRLKKILDACKSKSKCEGGDEIDSQNQDSDEPVKKSRGGCGAQQPKITI 882
            FKQAQKIRNPKNRLKKILDACK+KSKCEGGDEI++Q  DSDEPVKKSRGGCGAQQPK+TI
Sbjct: 121  FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180

Query: 883  EGMKMVAEYKLQKKKNDDAEQLPEPAERKQQLSAERVLSVLKRISDEDCMLL 1038
            EGMKM+AEYK+Q+KKNDD EQLPEP ERKQQLSAERVL+VLKRISDEDC+LL
Sbjct: 181  EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILL 232


>ref|XP_003537656.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Glycine
            max]
          Length = 1827

 Score =  427 bits (1098), Expect = e-117
 Identities = 205/232 (88%), Positives = 218/232 (93%)
 Frame = +1

Query: 343  MDIRFPYSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKVAGLSDPRLGTI 522
            MDIRFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEHGETTERGKPKV GLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 523  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 702
            DRK+KCETC A+MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE +HK
Sbjct: 61   DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120

Query: 703  FKQAQKIRNPKNRLKKILDACKSKSKCEGGDEIDSQNQDSDEPVKKSRGGCGAQQPKITI 882
            FKQA +IRNPKNRLKKILDACK+KSKCEGGDEID   QD+DEPVKKSRGGCGAQQPKITI
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180

Query: 883  EGMKMVAEYKLQKKKNDDAEQLPEPAERKQQLSAERVLSVLKRISDEDCMLL 1038
            EGMKM+AEYK Q+KK+DD EQLPEP ERKQ LSAERVL VLKRISDEDC LL
Sbjct: 181  EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLL 232


>ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Glycine
            max]
          Length = 1827

 Score =  422 bits (1086), Expect = e-116
 Identities = 203/232 (87%), Positives = 217/232 (93%)
 Frame = +1

Query: 343  MDIRFPYSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKVAGLSDPRLGTI 522
            MDIRFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEHGETTERGKPKV GLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 523  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 702
            DRK+KCETC A+MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE +HK
Sbjct: 61   DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120

Query: 703  FKQAQKIRNPKNRLKKILDACKSKSKCEGGDEIDSQNQDSDEPVKKSRGGCGAQQPKITI 882
            FKQA +IRNPKNRLKKILDACK+KSKCEGGDEID   QD++E VKKSRGGCGAQQPKITI
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTEESVKKSRGGCGAQQPKITI 180

Query: 883  EGMKMVAEYKLQKKKNDDAEQLPEPAERKQQLSAERVLSVLKRISDEDCMLL 1038
            EGMKM+AEYK Q+KK+DD EQLPEP ERKQ LSAERVL VLKRISDEDC LL
Sbjct: 181  EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLL 232


>ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis
            sativus]
          Length = 1853

 Score =  421 bits (1083), Expect = e-115
 Identities = 202/232 (87%), Positives = 217/232 (93%)
 Frame = +1

Query: 343  MDIRFPYSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKVAGLSDPRLGTI 522
            MD+RFPYSPAEVAKVR+VQFGILSPDEIRQMSVV IEHGETTERGKPKVAGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 523  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 702
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+IMR VCFNCSKIL DEE+ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 703  FKQAQKIRNPKNRLKKILDACKSKSKCEGGDEIDSQNQDSDEPVKKSRGGCGAQQPKITI 882
            FKQA +I+NPKNRL+KILDACK+K+KCEGGDEID Q QDSD+PVKKSRGGCGAQQPKI+I
Sbjct: 121  FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180

Query: 883  EGMKMVAEYKLQKKKNDDAEQLPEPAERKQQLSAERVLSVLKRISDEDCMLL 1038
            EGMKM AEYK Q+KKNDD EQLPEP ERKQ L+AERVL +LKRI+DEDC LL
Sbjct: 181  EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLL 232


>ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
            subunit RPB1-like [Cucumis sativus]
          Length = 1832

 Score =  421 bits (1083), Expect = e-115
 Identities = 202/232 (87%), Positives = 217/232 (93%)
 Frame = +1

Query: 343  MDIRFPYSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKVAGLSDPRLGTI 522
            MD+RFPYSPAEVAKVR+VQFGILSPDEIRQMSVV IEHGETTERGKPKVAGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 523  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 702
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+IMR VCFNCSKIL DEE+ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 703  FKQAQKIRNPKNRLKKILDACKSKSKCEGGDEIDSQNQDSDEPVKKSRGGCGAQQPKITI 882
            FKQA +I+NPKNRL+KILDACK+K+KCEGGDEID Q QDSD+PVKKSRGGCGAQQPKI+I
Sbjct: 121  FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180

Query: 883  EGMKMVAEYKLQKKKNDDAEQLPEPAERKQQLSAERVLSVLKRISDEDCMLL 1038
            EGMKM AEYK Q+KKNDD EQLPEP ERKQ L+AERVL +LKRI+DEDC LL
Sbjct: 181  EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLL 232


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