BLASTX nr result

ID: Atractylodes22_contig00009702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009702
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17870.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like...    98   1e-18
ref|XP_002511366.1| ring finger protein, putative [Ricinus commu...    91   2e-16
gb|ADK92879.1| ring H2 finger protein [Hypericum perforatum]           80   4e-13
ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thali...    71   2e-10

>emb|CBI17870.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score =  100 bits (249), Expect = 2e-19
 Identities = 59/109 (54%), Positives = 72/109 (66%), Gaps = 11/109 (10%)
 Frame = -3

Query: 553 GSSGPH-RWSDVQPSDLLYLRSEMILSNVRRLKRSRPSVLHEGNNGWWQSGRGVINSRSV 377
           GS G H RWSDVQPSDLLYLRSEMI+S+ RRL     ++      G W SGR VINSRSV
Sbjct: 298 GSGGFHQRWSDVQPSDLLYLRSEMIISDNRRLSSCHGTI----EGGSW-SGRSVINSRSV 352

Query: 376 SEMSGLSRFGSN----------EEAGVLSRWLAWLSEPKSQPAALHSGR 260
           SE++GLSR GSN           +AGV+SRWLAW+S+ +    +  +GR
Sbjct: 353 SEITGLSRLGSNYHHLDRHHQQRQAGVVSRWLAWISQSRPSVRSERAGR 401


>ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like [Vitis vinifera]
          Length = 404

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 57/99 (57%), Positives = 68/99 (68%), Gaps = 11/99 (11%)
 Frame = -3

Query: 553 GSSGPH-RWSDVQPSDLLYLRSEMILSNVRRLKRSRPSVLHEGNNGWWQSGRGVINSRSV 377
           GS G H RWSDVQPSDLLYLRSEMI+S+ RRL     ++      G W SGR VINSRSV
Sbjct: 298 GSGGFHQRWSDVQPSDLLYLRSEMIISDNRRLSSCHGTI----EGGSW-SGRSVINSRSV 352

Query: 376 SEMSGLSRFGSN----------EEAGVLSRWLAWLSEPK 290
           SE++GLSR GSN           +AGV+SRWLAW+S+ +
Sbjct: 353 SEITGLSRLGSNYHHLDRHHQQRQAGVVSRWLAWISQSR 391


>ref|XP_002511366.1| ring finger protein, putative [Ricinus communis]
           gi|223550481|gb|EEF51968.1| ring finger protein,
           putative [Ricinus communis]
          Length = 493

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 58/117 (49%), Positives = 70/117 (59%), Gaps = 22/117 (18%)
 Frame = -3

Query: 562 IVVGSSGPHRWSDVQPSDLLYLRSEMILSNVRRLKR---SRPSVLHEGNN---------G 419
           IV G++   RWSDV PSDLLYLRSEMILS+ RR      SRPSV    ++         G
Sbjct: 363 IVSGNASDERWSDVHPSDLLYLRSEMILSDNRRFSMTSGSRPSVGRRQHHQKQQNAVVKG 422

Query: 418 WWQSGRGVINSRSVSEMSGLSRFGSNE----------EAGVLSRWLAWLSEPKSQPA 278
               GR VIN RSVSE++GL+RF   E          +AGV+SRWLAW+S  +S PA
Sbjct: 423 PSSDGRSVINGRSVSEITGLNRFSDRESNNSRHHRERQAGVVSRWLAWISS-QSHPA 478


>gb|ADK92879.1| ring H2 finger protein [Hypericum perforatum]
          Length = 485

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 50/119 (42%), Positives = 64/119 (53%), Gaps = 22/119 (18%)
 Frame = -3

Query: 553 GSSGPHRWSDVQPSDLLYLRSEMILSNVRRLKRSRPSVLHEGNNGWWQSGRGVINSRSVS 374
           G+ G  RWSDVQPSDLLYLRSEM++  +   +R  PS           +GR VIN+RSVS
Sbjct: 354 GAHGGERWSDVQPSDLLYLRSEMLM--MMSSRRCSPSS---------SNGRSVINTRSVS 402

Query: 373 EMSGLSRFGSN----------------------EEAGVLSRWLAWLSEPKSQPAALHSG 263
           E++GLSRF  +                       +AG+LSRWL W+S   S PA   +G
Sbjct: 403 EITGLSRFHPSFASGRDVREGTRSVNYDGRHRERQAGLLSRWLGWVSSSHSVPAVRSAG 461


>ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thaliana]
           gi|58743300|gb|AAW81728.1| At5g05810 [Arabidopsis
           thaliana] gi|61656157|gb|AAX49381.1| At5g05810
           [Arabidopsis thaliana] gi|332003545|gb|AED90928.1|
           RING-H2 finger protein ATL43 [Arabidopsis thaliana]
          Length = 353

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 7/90 (7%)
 Frame = -3

Query: 553 GSSGPHRWSDVQPSDLLYLRSEMILSNVRRLKRSRPSVLHEGNNGWWQSGRGVINSRSVS 374
           G+    RWS+V+PSDLLYLRSEMILS+ R+L  +             + GR VIN RSVS
Sbjct: 267 GNRDDQRWSEVRPSDLLYLRSEMILSDCRKLAAA-------------EGGRDVINGRSVS 313

Query: 373 EMSGLS---RFG----SNEEAGVLSRWLAW 305
           E++G+    R+G      +   V+SRWLAW
Sbjct: 314 ELTGIERRRRWGGEPRQRQATAVISRWLAW 343


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