BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009615
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi...   215   6e-54
ref|XP_002527978.1| pentatricopeptide repeat-containing protein,...   176   3e-42
ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|2...   157   2e-36
ref|NP_568460.1| pentatricopeptide repeat-containing protein [Ar...   151   9e-35
dbj|BAC41999.1| unknown protein [Arabidopsis thaliana]                151   9e-35

>ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  215 bits (547), Expect = 6e-54
 Identities = 120/220 (54%), Positives = 147/220 (66%), Gaps = 5/220 (2%)
 Frame = -3

Query: 645 EDSHLLFHRLCNNSFQTLDYIKDRISQIFTDTFCCKRSSTYLTDTRNSRNNELFPFSFQD 466
           ++SH+ F RL N   ++   IK  ++QIF + F  K  S    + R S +  L PF+ +D
Sbjct: 8   QESHVFF-RLFNACIES---IKHDVAQIFANVFSFKPYSP--ANNRPSGHGNLLPFALED 61

Query: 465 LIEESGSKYHQKTQGWSPQGGG-----DPKVVFNVLDAILKGSLERLKLMRESMSWEHIG 301
           LI   G++Y   TQ W  Q  G     DP+VVFNVLDAILK SLERLK+MRES+S   IG
Sbjct: 62  LIISVGNQYQVTTQDWFSQNKGHDEERDPRVVFNVLDAILKDSLERLKMMRESVSLTKIG 121

Query: 300 HYNCTLKASYIQHVDTIRNLSLEGRLGVALWLRNKMIHEGVVPDVVTHNYLVNGFCKVGA 121
              CTL+  Y   V  IRNL LEG+L  ALWLRNKMI +GV+PDV+THNYLVNG CK G 
Sbjct: 122 LNGCTLEMDYTGCVAMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGD 181

Query: 120 FEKAEWLVREMCCWGPSPNCATYNTLMKGYCDLNDIDKAL 1
            EKA+ LVREM   GPSPNCAT+NT +KGYC  N++DKAL
Sbjct: 182 LEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKAL 221



 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
 Frame = -3

Query: 408 GGGDPKVVFNVLDAIL--KGSLERLKLMRESMSWEHIGHYNCTLKASYIQHVDTIRNLSL 235
           G G  KV +N+L   L  KG L+  + + E +  +  G     +  S I     ++    
Sbjct: 231 GIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLK---- 286

Query: 234 EGRLGVALWLRNKMIHEGVVPDVVTHNYLVNGFCKVGAFEKAEWLVREMCCWGPSPNCAT 55
           +G +  AL   ++M+  G   DVV +N L++GFC +     A     EM   G  P+  T
Sbjct: 287 KGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFT 346

Query: 54  YNTLMKGYCDLNDIDKA 4
           YNTL+ G+C + ++D+A
Sbjct: 347 YNTLISGFCKIGNLDEA 363


>ref|XP_002527978.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532604|gb|EEF34390.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 621

 Score =  176 bits (447), Expect = 3e-42
 Identities = 95/215 (44%), Positives = 133/215 (61%), Gaps = 2/215 (0%)
 Frame = -3

Query: 639 SHLLFHRLCNNSFQTLDYIKDRISQIFTDTFCCKRSSTYLTDTRNSRNNELFPFSFQDLI 460
           SH+   RL + +   +D IK   +QIF + FC           R S  +    + F D++
Sbjct: 15  SHIFLLRLLDRA---MDTIKHHTAQIFANIFC-----------RESIIDPNASYFFDDMV 60

Query: 459 EESGSKYHQKTQGWSPQGGGDPKVVFNVLDAILKGSLERLKLMRESM--SWEHIGHYNCT 286
           +   ++   +    +     DP+VVFNVLDA+LKGSLERLK MRES+  S   +G    +
Sbjct: 61  KTLSNRCRLRRDNKNLNDEDDPQVVFNVLDAMLKGSLERLKSMRESIGISSVKVGLAGRS 120

Query: 285 LKASYIQHVDTIRNLSLEGRLGVALWLRNKMIHEGVVPDVVTHNYLVNGFCKVGAFEKAE 106
           +  SY  H   +R+L L G+LG ALWLR K++H+G VPD++THN+LVNG C  G  +KA+
Sbjct: 121 VDVSYAGHASLVRDLCLAGKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQKAD 180

Query: 105 WLVREMCCWGPSPNCATYNTLMKGYCDLNDIDKAL 1
            L++EM   GPSPNCAT+NT +KGYC LN++DKAL
Sbjct: 181 CLIKEMLEIGPSPNCATFNTFIKGYCLLNNVDKAL 215


>ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|222874911|gb|EEF12042.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score =  157 bits (396), Expect = 2e-36
 Identities = 84/152 (55%), Positives = 109/152 (71%), Gaps = 2/152 (1%)
 Frame = -3

Query: 450 GSKYHQKTQGWSPQGGGDPKVVFNVLDAILKGSLERLKLMR-ESMSWEH-IGHYNCTLKA 277
           G ++    QG    GGGDP +VFNVLD++LKGSL+RLK MR + +S+ +  G   C L  
Sbjct: 6   GDEFSNNKQG--DGGGGDP-LVFNVLDSMLKGSLDRLKSMRLQFVSFLYGKGITGCALDV 62

Query: 276 SYIQHVDTIRNLSLEGRLGVALWLRNKMIHEGVVPDVVTHNYLVNGFCKVGAFEKAEWLV 97
           +   +   I++L L G+LG ALWLR+KMI +G VPDV+THNY+VNG CK+   EKA+WL+
Sbjct: 63  NCAGNEAIIKDLCLGGKLGPALWLRSKMIQKGFVPDVLTHNYMVNGLCKMIELEKADWLI 122

Query: 96  REMCCWGPSPNCATYNTLMKGYCDLNDIDKAL 1
           REM   GPSPNCATYNT +KGYC L+ +DKAL
Sbjct: 123 REMLDKGPSPNCATYNTFIKGYCLLDKVDKAL 154


>ref|NP_568460.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75154065|sp|Q8L6Y3.1|PP396_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g24830 gi|22655280|gb|AAM98230.1| putative protein
           [Arabidopsis thaliana] gi|30725398|gb|AAP37721.1|
           At5g24830 [Arabidopsis thaliana]
           gi|332005984|gb|AED93367.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 593

 Score =  151 bits (382), Expect = 9e-35
 Identities = 89/218 (40%), Positives = 122/218 (55%), Gaps = 5/218 (2%)
 Frame = -3

Query: 639 SHLLFHRLCNNSFQTLDYIKDRISQIFTDTFCCKRSSTYLTDTRNSRNNELFPFSFQDLI 460
           S     RL N   Q+LD++ D +S++    F             N R+ E+     +   
Sbjct: 13  SQFTVFRLLN---QSLDFVSDNVSRLLAPIFT------------NLRDFEMRLSCIERPP 57

Query: 459 EESGSKYHQKTQGWSPQGGG-----DPKVVFNVLDAILKGSLERLKLMRESMSWEHIGHY 295
             SG+  H  T+ W           DP+ +FNVLD ILK SL+RL  +RES+       Y
Sbjct: 58  SISGNHSHLCTEKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQTKSFDY 117

Query: 294 NCTLKASYIQHVDTIRNLSLEGRLGVALWLRNKMIHEGVVPDVVTHNYLVNGFCKVGAFE 115
           +  L      H   +R+L L+G+L  ALWLR KMI+ GV+P ++THN+L+NG CK G  E
Sbjct: 118 DDCLSI----HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIE 173

Query: 114 KAEWLVREMCCWGPSPNCATYNTLMKGYCDLNDIDKAL 1
           KA+ LVREM   GPSPNC +YNTL+KG C +N++DKAL
Sbjct: 174 KADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKAL 211


>dbj|BAC41999.1| unknown protein [Arabidopsis thaliana]
          Length = 593

 Score =  151 bits (382), Expect = 9e-35
 Identities = 89/218 (40%), Positives = 122/218 (55%), Gaps = 5/218 (2%)
 Frame = -3

Query: 639 SHLLFHRLCNNSFQTLDYIKDRISQIFTDTFCCKRSSTYLTDTRNSRNNELFPFSFQDLI 460
           S     RL N   Q+LD++ D +S++    F             N R+ E+     +   
Sbjct: 13  SQFTVFRLLN---QSLDFVSDNVSRLLAPIFT------------NLRDLEMRLSCIERPP 57

Query: 459 EESGSKYHQKTQGWSPQGGG-----DPKVVFNVLDAILKGSLERLKLMRESMSWEHIGHY 295
             SG+  H  T+ W           DP+ +FNVLD ILK SL+RL  +RES+       Y
Sbjct: 58  SISGNHSHLCTEKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQAKSFDY 117

Query: 294 NCTLKASYIQHVDTIRNLSLEGRLGVALWLRNKMIHEGVVPDVVTHNYLVNGFCKVGAFE 115
           +  L      H   +R+L L+G+L  ALWLR KMI+ GV+P ++THN+L+NG CK G  E
Sbjct: 118 DDCLSI----HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIE 173

Query: 114 KAEWLVREMCCWGPSPNCATYNTLMKGYCDLNDIDKAL 1
           KA+ LVREM   GPSPNC +YNTL+KG C +N++DKAL
Sbjct: 174 KADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKAL 211