BLASTX nr result

ID: Atractylodes22_contig00009558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009558
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327905.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
dbj|BAM28758.1| ROX1 homologue [Nicotiana benthamiana]                 62   6e-08
dbj|BAM28759.1| ROX1 homologue [Nicotiana tabacum]                     61   8e-08
ref|XP_002275180.1| PREDICTED: protein E6-like [Vitis vinifera]        61   8e-08
dbj|BAA06461.1| TED3 [Zinnia elegans]                                  61   8e-08

>ref|XP_002327905.1| predicted protein [Populus trichocarpa] gi|222837314|gb|EEE75693.1|
           predicted protein [Populus trichocarpa]
          Length = 373

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 50/145 (34%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
 Frame = -3

Query: 435 YLPENYNPVAYTTPIHSSTQDLPDEFKDPQPYHYNDDSSMYNSQNQEQFVGTNGGNMYNS 256
           Y   N N   YT   +++   L  E  + +    N +S    ++N      TN  N  N+
Sbjct: 185 YETGNQNNNGYTNNYYNNGYKLAGESYETE----NQNSENGYTKNYNNNGNTNNNNYNNN 240

Query: 255 QKQQFVGTNGGNMYNTQKQGMSDTRFLENGRYYHAGDNAYNSQKQGMDEASLMETEDGGN 76
                   NG   Y T++QGMSDTRF+E G+YY+   +  N+++QGM +   ME   GG 
Sbjct: 241 GYTTNYNNNG---YETERQGMSDTRFMEGGKYYY---HVKNTERQGMSDTRSME---GGK 291

Query: 75  MY----NSQKQDMGDARFMENGRYY 13
            Y    N+++Q M D RFME G+YY
Sbjct: 292 YYSNVKNTERQGMSDTRFMEGGKYY 316


>dbj|BAM28758.1| ROX1 homologue [Nicotiana benthamiana]
          Length = 346

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 25/144 (17%)
 Frame = -3

Query: 357 KDPQPYHYNDDSSMYNSQNQEQFV--------------GTNGGNMYNSQKQQFVGTNGGN 220
           ++ + Y+ N+  + YN+ N EQ                 TN GN YN+  Q+   +   N
Sbjct: 201 EEEEEYYNNNGGNTYNNNNNEQQEFSETRLSARTYSTNPTNYGNNYNNNNQEQSYSTNYN 260

Query: 219 MYNT--------QKQGMSDTRFLENGRYYH---AGDNAYNSQKQGMDEASLMETEDGGNM 73
            YNT        Q+QGMSDTRFL NG++Y+   A  +A +  +   + A++ +  +  N 
Sbjct: 261 NYNTGKSNYRVHQQQGMSDTRFLGNGKFYYDINAEKHARDPYENAREFAAMNQQYNNRNT 320

Query: 72  YNSQKQDMGDARFMENGRYYQGED 1
           Y + +  + + RF EN   +Q ED
Sbjct: 321 YGNNEYSINNNRF-ENEEEFQVED 343



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 53/209 (25%), Positives = 76/209 (36%), Gaps = 68/209 (32%)
 Frame = -3

Query: 435 YLPENYNPVAYTTPIHSSTQ--DLPDE-------------------FKDPQPYHYNDDSS 319
           YLP+NYNPV+Y T    +T   DL +                    +  P  Y  N++++
Sbjct: 87  YLPKNYNPVSYVTVPEDNTNENDLNNNEFTTKHTTTTTTASNNNQFYSGPTAYGNNNNNN 146

Query: 318 MY--------------NSQNQEQFVGTNGGNMYNSQKQQFVGTNGGNMYNTQKQGMSDTR 181
                           N Q Q+QF   +G N Y++ +QQ    NGGN YN       +  
Sbjct: 147 QQQYYNGVSDYSTTSNNQQKQQQFY--SGDNFYSNNQQQQQDYNGGNTYNNNDNNNEE-- 202

Query: 180 FLENGRYYHAGDNAYNSQKQGMDEAS---------LMETEDGGNMYNS------------ 64
             E   Y + G N YN+      E S              + GN YN+            
Sbjct: 203 --EEEYYNNNGGNTYNNNNNEQQEFSETRLSARTYSTNPTNYGNNYNNNNQEQSYSTNYN 260

Query: 63  ------------QKQDMGDARFMENGRYY 13
                       Q+Q M D RF+ NG++Y
Sbjct: 261 NYNTGKSNYRVHQQQGMSDTRFLGNGKFY 289


>dbj|BAM28759.1| ROX1 homologue [Nicotiana tabacum]
          Length = 346

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 55/204 (26%), Positives = 80/204 (39%), Gaps = 63/204 (30%)
 Frame = -3

Query: 435 YLPENYNPVAYTTPIHSSTQ--DLPDE------------------FKDPQPYHYNDDSSM 316
           YLP+NYNPV+Y T    +T   DL +                   +  P  Y  N++   
Sbjct: 90  YLPKNYNPVSYVTVPEDNTNENDLNNNEFTTKHTTTTTASNNNQFYSGPTTYGNNNNQQY 149

Query: 315 YNS-----------QNQEQFVGTNGGNMYNSQKQQFVGTNGGNMYNTQKQGMSDTRFLEN 169
           YN            Q Q+QF   +G N Y++ +QQ    NGGN YN      ++    E 
Sbjct: 150 YNGVSDYSTKRNNQQQQQQFY--SGDNFYSNNQQQQQYYNGGNSYNNNNDNNNNEE--EE 205

Query: 168 GRYYHAGDNAY--NSQKQGMDEASL------METEDGGNMYNS----------------- 64
             Y + G N Y  N+++Q + E  L          + GN YN+                 
Sbjct: 206 EYYNNNGGNTYYNNNEQQELSETRLSARTYSTNPTNYGNNYNNNNQEQSYSTNYNNYNTG 265

Query: 63  -------QKQDMGDARFMENGRYY 13
                  Q+Q M D RF+ NG++Y
Sbjct: 266 KSNYRVHQQQGMSDTRFLGNGKFY 289



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 24/143 (16%)
 Frame = -3

Query: 357 KDPQPYHYNDDSSMYNSQNQEQFVG-------------TNGGNMYNSQKQQFVGTNGGNM 217
           ++ + Y+ N+  + Y + N++Q +              TN GN YN+  Q+   +   N 
Sbjct: 202 EEEEEYYNNNGGNTYYNNNEQQELSETRLSARTYSTNPTNYGNNYNNNNQEQSYSTNYNN 261

Query: 216 YNT--------QKQGMSDTRFLENGRYYH---AGDNAYNSQKQGMDEASLMETEDGGNMY 70
           YNT        Q+QGMSDTRFL NG++Y+   A  +A +  +   + A++ +  +  N Y
Sbjct: 262 YNTGKSNYRVHQQQGMSDTRFLGNGKFYYDINAEKHARDPYENAREFAAMNQQYNSRNTY 321

Query: 69  NSQKQDMGDARFMENGRYYQGED 1
            + + +  +  F EN   +Q ED
Sbjct: 322 GNNEYNSNNNSF-ENEEEFQVED 343


>ref|XP_002275180.1| PREDICTED: protein E6-like [Vitis vinifera]
          Length = 282

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
 Frame = -3

Query: 306 QNQEQFVGTNGGNMYNSQKQQFVGTNGGNMYNTQKQGMSDTRFLENGRYYHAGDN-AYNS 130
           ++ ++   T+  N  N    ++   NG   + T++QGMSDTRFLENG+Y +  D  + NS
Sbjct: 106 ESYKELAETSYSNNNNRYSTEYYKNNG---HTTEQQGMSDTRFLENGKYSYKPDTYSPNS 162

Query: 129 QKQGMDEA------SLMETEDGG------------------NMYNSQKQDMGDARFMENG 22
            K G   +      S   + + G                  N Y+++KQ M D RF+ENG
Sbjct: 163 NKNGYSSSYRNNGYSTSSSHNNGYSTSSSHNNGYSTSSSYNNGYSTEKQGMSDTRFLENG 222

Query: 21  RYY 13
           +YY
Sbjct: 223 KYY 225



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 12/129 (9%)
 Frame = -3

Query: 351 PQPYHYNDDSSMYNSQNQEQFVGT----NGGNMYNSQKQQFVGTNGG--NMYNTQKQGMS 190
           P  Y  N + + Y+S  +     T    N G   +S       T+    N Y+T+KQGMS
Sbjct: 155 PDTYSPNSNKNGYSSSYRNNGYSTSSSHNNGYSTSSSHNNGYSTSSSYNNGYSTEKQGMS 214

Query: 189 DTRFLENGRYYHAGDN------AYNSQKQGMDEASLMETEDGGNMYNSQKQDMGDARFME 28
           DTRFLENG+YYH  +N       YN++K            +  N +NS ++        +
Sbjct: 215 DTRFLENGKYYHDLNNENHYVDGYNTEKGSTSNEFYYSNTENSNEFNSMEEYQ-----RQ 269

Query: 27  NGRYYQGED 1
              Y QG++
Sbjct: 270 QEEYQQGQE 278


>dbj|BAA06461.1| TED3 [Zinnia elegans]
          Length = 319

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
 Frame = -3

Query: 342 YHYNDDSSMYNSQNQEQFVGTN-----GGNMYNSQKQQFVGTNGGNMYNTQKQGMSDTRF 178
           Y  N   +  N +N      TN      GN Y S K++  G N  N Y  ++QGMSDTRF
Sbjct: 203 YESNGYKTENNGENNNYMTFTNENSGYNGNRYTSPKEENNGYNNNNGYMAEQQGMSDTRF 262

Query: 177 LENGRYYHAGDNAYNSQKQGMDEASLMETEDGGNMYNSQKQD 52
           LENG+Y +  +N  N+ +   +E    E  D G  Y    ++
Sbjct: 263 LENGKYSYDANNNGNNHESSYEE----EVSDNGEGYYRNNEE 300


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