BLASTX nr result

ID: Atractylodes22_contig00009535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009535
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFY03628.1| beta-tubulin, partial [Eucalyptus globulus]            159   2e-37
ref|XP_002509801.1| tubulin beta chain, putative [Ricinus commun...   159   2e-37
ref|XP_002304492.1| tubulin, beta chain [Populus trichocarpa] gi...   159   2e-37
ref|XP_002273514.1| PREDICTED: tubulin beta-1 chain [Vitis vinif...   159   2e-37
gb|ABS50665.1| beta-tubulin [Eucalyptus grandis] gi|383081782|db...   159   2e-37

>gb|AFY03628.1| beta-tubulin, partial [Eucalyptus globulus]
          Length = 405

 Score =  159 bits (403), Expect = 2e-37
 Identities = 77/82 (93%), Positives = 79/82 (96%)
 Frame = +3

Query: 270 LILNAVGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR 449
           LI  + GDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR
Sbjct: 217 LINPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR 276

Query: 450 GSQQYRALTIPELTQQMWDAKN 515
           GSQQYR+LTIPELTQQMWDAKN
Sbjct: 277 GSQQYRSLTIPELTQQMWDAKN 298


>ref|XP_002509801.1| tubulin beta chain, putative [Ricinus communis]
           gi|223549700|gb|EEF51188.1| tubulin beta chain, putative
           [Ricinus communis]
          Length = 445

 Score =  159 bits (403), Expect = 2e-37
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = +3

Query: 288 GDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR 467
           GDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR
Sbjct: 223 GDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR 282

Query: 468 ALTIPELTQQMWDAKN 515
           ALTIPELTQQMWDAKN
Sbjct: 283 ALTIPELTQQMWDAKN 298


>ref|XP_002304492.1| tubulin, beta chain [Populus trichocarpa]
           gi|222841924|gb|EEE79471.1| tubulin, beta chain [Populus
           trichocarpa]
          Length = 444

 Score =  159 bits (403), Expect = 2e-37
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = +3

Query: 288 GDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR 467
           GDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR
Sbjct: 223 GDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR 282

Query: 468 ALTIPELTQQMWDAKN 515
           ALTIPELTQQMWDAKN
Sbjct: 283 ALTIPELTQQMWDAKN 298


>ref|XP_002273514.1| PREDICTED: tubulin beta-1 chain [Vitis vinifera]
          Length = 444

 Score =  159 bits (403), Expect = 2e-37
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = +3

Query: 288 GDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR 467
           GDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR
Sbjct: 223 GDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR 282

Query: 468 ALTIPELTQQMWDAKN 515
           ALTIPELTQQMWDAKN
Sbjct: 283 ALTIPELTQQMWDAKN 298


>gb|ABS50665.1| beta-tubulin [Eucalyptus grandis] gi|383081782|dbj|BAM05543.1|
           beta-tubulin 1 [Eucalyptus pilularis]
          Length = 444

 Score =  159 bits (403), Expect = 2e-37
 Identities = 77/82 (93%), Positives = 79/82 (96%)
 Frame = +3

Query: 270 LILNAVGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR 449
           LI  + GDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR
Sbjct: 217 LINPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR 276

Query: 450 GSQQYRALTIPELTQQMWDAKN 515
           GSQQYR+LTIPELTQQMWDAKN
Sbjct: 277 GSQQYRSLTIPELTQQMWDAKN 298


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