BLASTX nr result

ID: Atractylodes22_contig00009499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009499
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615969.1| Pseudouridylate synthase [Medicago truncatul...    69   5e-10
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]    60   7e-10
ref|XP_003518334.1| PREDICTED: putative tRNA pseudouridine synth...    66   3e-09
ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatul...    66   3e-09
ref|XP_003557058.1| PREDICTED: putative tRNA pseudouridine synth...    64   1e-08

>ref|XP_003615969.1| Pseudouridylate synthase [Medicago truncatula]
           gi|355517304|gb|AES98927.1| Pseudouridylate synthase
           [Medicago truncatula]
          Length = 483

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = +3

Query: 6   SIMLPQLLEFLDPLKSPWQEWVALLDANTRIPDTQLDEVRNAWIAWKDNSPHKDAS 173
           S+MLP+L +FLD  KSPW +WV  LD  + IP+ QL+EVR AW  WK+N   K AS
Sbjct: 426 SVMLPELSKFLDSSKSPWADWVEKLDKYSSIPNDQLEEVREAWRTWKENFRAKPAS 481


>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score = 60.5 bits (145), Expect(3) = 7e-10
 Identities = 25/49 (51%), Positives = 37/49 (75%)
 Frame = +3

Query: 6   SIMLPQLLEFLDPLKSPWQEWVALLDANTRIPDTQLDEVRNAWIAWKDN 152
           S++LPQ+ +FLDP KSPW +W+  L  ++ IP+ +LD+VR AW  WK+N
Sbjct: 459 SVILPQVSKFLDPSKSPWHDWLENLTLSS-IPEAELDDVRTAWKLWKEN 506



 Score = 26.6 bits (57), Expect(3) = 7e-10
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 157 HIRMHHNNLAKLEKKIVLNDFHCGRWKSGLADY 255
           H   H+NNL  L    VL DF  G W+ G  +Y
Sbjct: 520 HSPGHNNNLYSL----VLEDFGGGNWELGTVNY 548



 Score = 20.4 bits (41), Expect(3) = 7e-10
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 264 KQQSC*WSSCPHC 302
           K+++    SCPHC
Sbjct: 587 KEEAAYTDSCPHC 599


>ref|XP_003518334.1| PREDICTED: putative tRNA pseudouridine synthase-like [Glycine max]
          Length = 516

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/56 (51%), Positives = 38/56 (67%)
 Frame = +3

Query: 6   SIMLPQLLEFLDPLKSPWQEWVALLDANTRIPDTQLDEVRNAWIAWKDNSPHKDAS 173
           S++LP++ +FLD   SPW +WV  LD  + IPD +LDEVR AW  WK+N   K AS
Sbjct: 459 SVVLPEVSKFLDSSNSPWAKWVENLDKYSSIPDAELDEVRKAWKTWKENFRLKSAS 514


>ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatula]
           gi|355517306|gb|AES98929.1| Pseudouridylate synthase
           [Medicago truncatula]
          Length = 501

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/50 (56%), Positives = 37/50 (74%)
 Frame = +3

Query: 3   KSIMLPQLLEFLDPLKSPWQEWVALLDANTRIPDTQLDEVRNAWIAWKDN 152
           +S+MLPQ+ +FLDP + PW EW+   DA+T IP+ QLDEVR A   WK+N
Sbjct: 443 RSVMLPQVSKFLDPSRVPWVEWIEKFDAHTSIPNDQLDEVRKARNLWKEN 492


>ref|XP_003557058.1| PREDICTED: putative tRNA pseudouridine synthase-like [Glycine max]
          Length = 518

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/56 (50%), Positives = 37/56 (66%)
 Frame = +3

Query: 6   SIMLPQLLEFLDPLKSPWQEWVALLDANTRIPDTQLDEVRNAWIAWKDNSPHKDAS 173
           S++LP++ +FLD   SPW +WV  LD  + IPD +LDEVR AW  WK+N   K  S
Sbjct: 461 SVVLPEVSKFLDSSSSPWAKWVENLDKYSSIPDVELDEVRKAWKTWKENFRVKSES 516


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