BLASTX nr result

ID: Atractylodes22_contig00009483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009483
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541805.1| PREDICTED: FBD-associated F-box protein At3g...    77   3e-12
ref|NP_191483.1| putative F-box/LRR-repeat protein [Arabidopsis ...    74   2e-11
ref|NP_191478.2| F-box/LRR-repeat protein [Arabidopsis thaliana]...    74   3e-11
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    74   3e-11
gb|ABK28610.1| unknown [Arabidopsis thaliana]                          74   3e-11

>ref|XP_003541805.1| PREDICTED: FBD-associated F-box protein At3g52670-like [Glycine
           max]
          Length = 639

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 47/117 (40%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
 Frame = +2

Query: 272 GEDIISRLPAVLLIHILSLLPEADANRTRILSNTWKNLWMFLPKLRFVMPFCWSIEDIKK 451
           G+DI S LP V++  ILS+LP  +A RT ILS  W+NLW F+ KL F     +    I K
Sbjct: 271 GQDIFSDLPDVIIGRILSILPTKEAVRTSILSKRWRNLWKFVTKLHFQDIEPYRRNKIDK 330

Query: 452 FH--DAVDQALAFRGGMDIERFSLYCSKNCDYNRVYDWVCTVVKCKVRELELRFPAD 616
           FH  D V   L       I+ FSLY S+  D N V  W+  ++   V EL +    D
Sbjct: 331 FHFLDFVYGVLFHLNNSRIQSFSLYLSEKYDPNHVNRWLANILNRGVTELSINSEKD 387


>ref|NP_191483.1| putative F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75264305|sp|Q9LX47.1|FDL46_ARATH RecName:
           Full=Putative F-box/FBD/LRR-repeat protein At3g59240
           gi|7801674|emb|CAB91594.1| putative protein [Arabidopsis
           thaliana] gi|332646374|gb|AEE79895.1| putative
           F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 504

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
 Frame = +2

Query: 275 EDIISRLPAVLLIHILSLLPEADANRTRILSNTWKNLWMFLPKLRF------VMPFCWSI 436
           +DIIS LP  L+ H+LS +P  +A  T +LS  W+ L+ F P L F        P  +  
Sbjct: 7   KDIISDLPEALICHLLSFVPTKEAALTSLLSEKWRYLFAFAPILDFDDSVWMQSPLVYMN 66

Query: 437 EDIKKFHDAVDQALAFRGGMDIERFSLYCSKNCDYNRVYDWVCTVVKCKVRELEL 601
           E  +KF D VD+ L  +G   + RFSL C    D   ++ W+  V++  V +L+L
Sbjct: 67  EVHRKFMDFVDRVLGLQGNSTLVRFSLNCRNGIDRECIFRWISNVIERGVSDLDL 121


>ref|NP_191478.2| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|122180148|sp|Q1PED9.1|FBL63_ARATH RecName:
           Full=F-box/LRR-repeat protein At3g59190
           gi|91806606|gb|ABE66030.1| F-box family protein
           [Arabidopsis thaliana] gi|332646366|gb|AEE79887.1|
           F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 388

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 49/130 (37%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
 Frame = +2

Query: 236 LSSARSDEIRDGGEDIISRLPAVLLIHILSLLPEADANRTRILSNTWKNLWMFLPKL--- 406
           +SS R D    G +DIIS LP  LL H+LS LP  +A  T +L+  W+ L  F+P L   
Sbjct: 1   MSSKRMDS---GSKDIISNLPDALLCHVLSFLPTTEAASTSVLAKRWRFLLAFVPNLDLD 57

Query: 407 -----RFVMPFCWSIEDIKKFHDAVDQALAFRGGMDIERFSLYCSKNCDYNRVYDWVCTV 571
                R  M     +E  K F   VD+ +A +G   +++FSL C    D +RV  WV  V
Sbjct: 58  NMIYDRPKMGRRKRLELRKSFKLFVDRVMALQGNAPLKKFSLRCKIGSDPSRVNGWVLKV 117

Query: 572 VKCKVRELEL 601
           +   V EL+L
Sbjct: 118 LDRGVEELDL 127


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 59/155 (38%), Positives = 77/155 (49%), Gaps = 2/155 (1%)
 Frame = +2

Query: 218 QSKRQRLSSARSDEIRDGGEDIISRLPAVLLIHILSLLPEADANRTRILSNTWKNLWMFL 397
           ++KR++L   ++++  D GE  I  LP  LL HILS L    A RT ILS  W +LW   
Sbjct: 9   KTKRKKL---KAEKETDSGEKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKST 65

Query: 398 PKLRFVMPFCWSIEDIKKFHDAVDQALAFRGGMDIERFSLYCSKNCDYNRVYDWVCTVVK 577
             L F   F       K F D VD+ LA RG  +I +F L C    D +RV  W+   V 
Sbjct: 66  TNLTF---FGLKSPKRKLFMDFVDRVLALRGPSNIVQFYLSCEVKDDPSRVGTWISAAVN 122

Query: 578 CKVRE--LELRFPADRFRVCFCWDLFRSCNTLVGL 676
             V++  LELR     F +  C  LF +C TL  L
Sbjct: 123 RNVKDLYLELRDFEASFVLPHC--LF-NCETLTEL 154


>gb|ABK28610.1| unknown [Arabidopsis thaliana]
          Length = 389

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 49/130 (37%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
 Frame = +2

Query: 236 LSSARSDEIRDGGEDIISRLPAVLLIHILSLLPEADANRTRILSNTWKNLWMFLPKL--- 406
           +SS R D    G +DIIS LP  LL H+LS LP  +A  T +L+  W+ L  F+P L   
Sbjct: 1   MSSKRMDS---GSKDIISNLPDALLCHVLSFLPTTEAASTSVLAKRWRFLLAFVPNLDLD 57

Query: 407 -----RFVMPFCWSIEDIKKFHDAVDQALAFRGGMDIERFSLYCSKNCDYNRVYDWVCTV 571
                R  M     +E  K F   VD+ +A +G   +++FSL C    D +RV  WV  V
Sbjct: 58  NMIYDRPKMGRRKRLELRKSFKLFVDRVMALQGNAPLKKFSLRCKIGSDPSRVNGWVLKV 117

Query: 572 VKCKVRELEL 601
           +   V EL+L
Sbjct: 118 LDRGVEELDL 127


Top