BLASTX nr result

ID: Atractylodes22_contig00009435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009435
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264648.1| PREDICTED: ribosome biogenesis regulatory pr...   171   1e-40
ref|XP_003542686.1| PREDICTED: ribosome biogenesis regulatory pr...   168   8e-40
ref|XP_003542685.1| PREDICTED: ribosome biogenesis regulatory pr...   168   8e-40
emb|CBI40495.3| unnamed protein product [Vitis vinifera]              168   8e-40
gb|ACU24351.1| unknown [Glycine max]                                  168   8e-40

>ref|XP_002264648.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Vitis
           vinifera] gi|296088996|emb|CBI38699.3| unnamed protein
           product [Vitis vinifera]
          Length = 327

 Score =  171 bits (432), Expect = 1e-40
 Identities = 84/119 (70%), Positives = 101/119 (84%)
 Frame = -3

Query: 619 PSHVQLAATALPITGTQAAPRKVSKDELQNVXXXXXXXXXXXGKFDKKLAGEKPPKHEKK 440
           PSH+QLAATALPITGTQ AP+KVSK+EL++V           GKFDKKL GEKP KH+ K
Sbjct: 178 PSHIQLAATALPITGTQTAPKKVSKNELEDVASMAATATASGGKFDKKLPGEKPEKHKGK 237

Query: 439 CRKFLPVVEGSGMGSLEKQQSDKILNKLMAKNSHEIFNVSKAVDMYNVKKDKKRRNQQG 263
            RKFLPVVEG+G+GSLEKQQ++KILNKL++KNSHEI NV KA++MYNVKK+KKR+N+QG
Sbjct: 238 YRKFLPVVEGTGIGSLEKQQTEKILNKLISKNSHEILNVDKAINMYNVKKEKKRKNRQG 296


>ref|XP_003542686.1| PREDICTED: ribosome biogenesis regulatory protein homolog isoform 2
           [Glycine max]
          Length = 286

 Score =  168 bits (425), Expect = 8e-40
 Identities = 84/119 (70%), Positives = 100/119 (84%)
 Frame = -3

Query: 619 PSHVQLAATALPITGTQAAPRKVSKDELQNVXXXXXXXXXXXGKFDKKLAGEKPPKHEKK 440
           PSHVQLAATALPITGTQAAP+KV+KDEL NV           GKFDKKLAGEKP KHE K
Sbjct: 138 PSHVQLAATALPITGTQAAPKKVTKDELGNVAGIAATATASGGKFDKKLAGEKPQKHEGK 197

Query: 439 CRKFLPVVEGSGMGSLEKQQSDKILNKLMAKNSHEIFNVSKAVDMYNVKKDKKRRNQQG 263
            RKFLPVVEG+G+GSLE++Q++KILNK+++KNSH I NV KAV M+NVKK+KKRR+++G
Sbjct: 198 YRKFLPVVEGTGIGSLEREQTEKILNKIISKNSHNILNVEKAVTMHNVKKEKKRRSEKG 256


>ref|XP_003542685.1| PREDICTED: ribosome biogenesis regulatory protein homolog isoform 1
           [Glycine max]
          Length = 332

 Score =  168 bits (425), Expect = 8e-40
 Identities = 84/119 (70%), Positives = 100/119 (84%)
 Frame = -3

Query: 619 PSHVQLAATALPITGTQAAPRKVSKDELQNVXXXXXXXXXXXGKFDKKLAGEKPPKHEKK 440
           PSHVQLAATALPITGTQAAP+KV+KDEL NV           GKFDKKLAGEKP KHE K
Sbjct: 184 PSHVQLAATALPITGTQAAPKKVTKDELGNVAGIAATATASGGKFDKKLAGEKPQKHEGK 243

Query: 439 CRKFLPVVEGSGMGSLEKQQSDKILNKLMAKNSHEIFNVSKAVDMYNVKKDKKRRNQQG 263
            RKFLPVVEG+G+GSLE++Q++KILNK+++KNSH I NV KAV M+NVKK+KKRR+++G
Sbjct: 244 YRKFLPVVEGTGIGSLEREQTEKILNKIISKNSHNILNVEKAVTMHNVKKEKKRRSEKG 302


>emb|CBI40495.3| unnamed protein product [Vitis vinifera]
          Length = 328

 Score =  168 bits (425), Expect = 8e-40
 Identities = 81/119 (68%), Positives = 100/119 (84%)
 Frame = -3

Query: 619 PSHVQLAATALPITGTQAAPRKVSKDELQNVXXXXXXXXXXXGKFDKKLAGEKPPKHEKK 440
           PSH+QLAATALPITGTQAAP+K SK+ELQ++           GKFDKKL GEKP KH+ K
Sbjct: 178 PSHIQLAATALPITGTQAAPKKASKNELQDIASMAAAATASGGKFDKKLVGEKPEKHKGK 237

Query: 439 CRKFLPVVEGSGMGSLEKQQSDKILNKLMAKNSHEIFNVSKAVDMYNVKKDKKRRNQQG 263
            RKFLPVVEG+G+GS EKQQ++K+LN+L++KNSHEI NV KA++MYNVKK+KKR+NQ+G
Sbjct: 238 YRKFLPVVEGTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMYNVKKEKKRKNQRG 296


>gb|ACU24351.1| unknown [Glycine max]
          Length = 286

 Score =  168 bits (425), Expect = 8e-40
 Identities = 84/119 (70%), Positives = 100/119 (84%)
 Frame = -3

Query: 619 PSHVQLAATALPITGTQAAPRKVSKDELQNVXXXXXXXXXXXGKFDKKLAGEKPPKHEKK 440
           PSHVQLAATALPITGTQAAP+KV+KDEL NV           GKFDKKLAGEKP KHE K
Sbjct: 138 PSHVQLAATALPITGTQAAPKKVTKDELGNVAGIAATATASGGKFDKKLAGEKPQKHEGK 197

Query: 439 CRKFLPVVEGSGMGSLEKQQSDKILNKLMAKNSHEIFNVSKAVDMYNVKKDKKRRNQQG 263
            RKFLPVVEG+G+GSLE++Q++KILNK+++KNSH I NV KAV M+NVKK+KKRR+++G
Sbjct: 198 YRKFLPVVEGTGIGSLEREQTEKILNKIVSKNSHNILNVEKAVTMHNVKKEKKRRSEKG 256


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