BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009420
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX99503.1| RNA polymerase beta subunit-2 (chloroplast) [Chry...   185   4e-45
ref|YP_007474718.1| RNA polymerase beta subunit-2 (chloroplast) ...   185   4e-45
ref|YP_007353755.1| RNA polymerase beta subunit-2 (chloroplast) ...   185   4e-45
ref|YP_398318.1| RNA polymerase beta'' subunit [Lactuca sativa] ...   185   4e-45
ref|YP_004564361.1| RNA polymerase beta' subunit (chloroplast) [...   185   4e-45

>gb|AEX99503.1| RNA polymerase beta subunit-2 (chloroplast) [Chrysanthemum indicum]
          Length = 1383

 Score =  185 bits (469), Expect = 4e-45
 Identities = 90/92 (97%), Positives = 91/92 (98%)
 Frame = +1

Query: 1   GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFICSRDLYVTIESEDIIHNVYIP 180
           GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAF+CSRDLYVTIESEDIIHNV IP
Sbjct: 346 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSRDLYVTIESEDIIHNVCIP 405

Query: 181 PKSFLLVQNDQYVESEQVIAEIRARTSTLNLK 276
           PKSFLLVQNDQYVESEQVIAEIRARTSTLNLK
Sbjct: 406 PKSFLLVQNDQYVESEQVIAEIRARTSTLNLK 437


>ref|YP_007474718.1| RNA polymerase beta subunit-2 (chloroplast) [Chrysanthemum indicum]
           gi|372863195|gb|AEX99267.1| RNA polymerase beta
           subunit-2 (chloroplast) [Chrysanthemum indicum]
          Length = 1383

 Score =  185 bits (469), Expect = 4e-45
 Identities = 90/92 (97%), Positives = 91/92 (98%)
 Frame = +1

Query: 1   GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFICSRDLYVTIESEDIIHNVYIP 180
           GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAF+CSRDLYVTIESEDIIHNV IP
Sbjct: 346 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSRDLYVTIESEDIIHNVCIP 405

Query: 181 PKSFLLVQNDQYVESEQVIAEIRARTSTLNLK 276
           PKSFLLVQNDQYVESEQVIAEIRARTSTLNLK
Sbjct: 406 PKSFLLVQNDQYVESEQVIAEIRARTSTLNLK 437


>ref|YP_007353755.1| RNA polymerase beta subunit-2 (chloroplast) [Chrysanthemum x
           morifolium] gi|375298824|gb|AFA45263.1| RNA polymerase
           beta subunit-2 (chloroplast) [Chrysanthemum x
           morifolium]
          Length = 1383

 Score =  185 bits (469), Expect = 4e-45
 Identities = 90/92 (97%), Positives = 91/92 (98%)
 Frame = +1

Query: 1   GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFICSRDLYVTIESEDIIHNVYIP 180
           GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAF+CSRDLYVTIESEDIIHNV IP
Sbjct: 346 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSRDLYVTIESEDIIHNVCIP 405

Query: 181 PKSFLLVQNDQYVESEQVIAEIRARTSTLNLK 276
           PKSFLLVQNDQYVESEQVIAEIRARTSTLNLK
Sbjct: 406 PKSFLLVQNDQYVESEQVIAEIRARTSTLNLK 437


>ref|YP_398318.1| RNA polymerase beta'' subunit [Lactuca sativa]
           gi|85700399|sp|Q56P11.2|RPOC2_LACSA RecName:
           Full=DNA-directed RNA polymerase subunit beta'';
           AltName: Full=PEP; AltName: Full=Plastid-encoded RNA
           polymerase subunit beta''; Short=RNA polymerase subunit
           beta'' gi|78675157|dbj|BAE47583.1| RNA polymerase beta''
           subunit [Lactuca sativa] gi|88656972|gb|ABD47222.1| RNA
           polymerase beta' subunit [Lactuca sativa]
          Length = 1381

 Score =  185 bits (469), Expect = 4e-45
 Identities = 90/92 (97%), Positives = 91/92 (98%)
 Frame = +1

Query: 1   GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFICSRDLYVTIESEDIIHNVYIP 180
           GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAF+CSRDLYVTIESEDIIHNV IP
Sbjct: 346 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSRDLYVTIESEDIIHNVCIP 405

Query: 181 PKSFLLVQNDQYVESEQVIAEIRARTSTLNLK 276
           PKSFLLVQNDQYVESEQVIAEIRARTSTLNLK
Sbjct: 406 PKSFLLVQNDQYVESEQVIAEIRARTSTLNLK 437


>ref|YP_004564361.1| RNA polymerase beta' subunit (chloroplast) [Ageratina adenophora]
           gi|334089662|gb|AEG64545.1| RNA polymerase beta' subunit
           (chloroplast) [Ageratina adenophora]
          Length = 1385

 Score =  185 bits (469), Expect = 4e-45
 Identities = 90/92 (97%), Positives = 91/92 (98%)
 Frame = +1

Query: 1   GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFICSRDLYVTIESEDIIHNVYIP 180
           GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAF+CSRDLYVTIESEDIIHNV IP
Sbjct: 346 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSRDLYVTIESEDIIHNVCIP 405

Query: 181 PKSFLLVQNDQYVESEQVIAEIRARTSTLNLK 276
           PKSFLLVQNDQYVESEQVIAEIRARTSTLNLK
Sbjct: 406 PKSFLLVQNDQYVESEQVIAEIRARTSTLNLK 437