BLASTX nr result

ID: Atractylodes22_contig00009279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009279
         (1380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-a...   355   1e-95
emb|CBI40185.3| unnamed protein product [Vitis vinifera]              355   1e-95
ref|XP_004138833.1| PREDICTED: probable U3 small nucleolar RNA-a...   343   8e-92
ref|XP_002531133.1| WD-repeat protein, putative [Ricinus communi...   340   4e-91
ref|XP_003556293.1| PREDICTED: probable U3 small nucleolar RNA-a...   334   4e-89

>ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-associated protein 7
            [Vitis vinifera]
          Length = 610

 Score =  355 bits (912), Expect = 1e-95
 Identities = 172/271 (63%), Positives = 209/271 (77%)
 Frame = +3

Query: 3    SMWKPTSAAPLVKMLCHHGPVTAVTFHPSGHLMATAGMDKKLKIWDLRKYKVLQTLPGHA 182
            +MWKPTS+APLVKMLCHHGP++A+ FHP+GHLMATAGMDKK+K+WDLRK++VLQTLPGHA
Sbjct: 337  TMWKPTSSAPLVKMLCHHGPISALAFHPNGHLMATAGMDKKIKLWDLRKFEVLQTLPGHA 396

Query: 183  KSLDFSQKGLLATSTGSFVQVLATSQDSQNYDRYMIHTMSKGYQVHKVLFRPYEDVLGIG 362
            K+LDFSQKGLLAT TGSFVQ+L     ++NY RYM H+M+KGYQ+ KVLFRPYEDVL IG
Sbjct: 397  KTLDFSQKGLLATGTGSFVQILGDFSGTENYSRYMGHSMAKGYQIGKVLFRPYEDVLSIG 456

Query: 363  HSMGLSSVLIPGSGEPNFDSWVANPYETSKQRREKEVRLLLDKLPPESIMLDPTKIGTLR 542
            HSMG S +LIPGSGEPNFDSWVANP+ETSKQRREKEV  LLDKLPPE+IMLDPTKIGT+R
Sbjct: 457  HSMGWSCILIPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLDPTKIGTVR 516

Query: 543  STRKKEKPTKQXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXIATKKLEGVEQAKRPFVEQ 722
             +RK+EKPTKQ              S                  K+ E V +AK+PF+E+
Sbjct: 517  QSRKREKPTKQERKAEMEAAVEDAKSIPLRKKMKGKNKPSKKVKKREEAVARAKKPFLER 576

Query: 723  KREDGSVKKKQKRITETSELPVSLQPFVSRK 815
            + E+ ++  K+++I+   ELP SLQ F  +K
Sbjct: 577  QMEEENLSTKKQKISGEIELPKSLQRFARKK 607


>emb|CBI40185.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  355 bits (912), Expect = 1e-95
 Identities = 172/271 (63%), Positives = 209/271 (77%)
 Frame = +3

Query: 3    SMWKPTSAAPLVKMLCHHGPVTAVTFHPSGHLMATAGMDKKLKIWDLRKYKVLQTLPGHA 182
            +MWKPTS+APLVKMLCHHGP++A+ FHP+GHLMATAGMDKK+K+WDLRK++VLQTLPGHA
Sbjct: 263  TMWKPTSSAPLVKMLCHHGPISALAFHPNGHLMATAGMDKKIKLWDLRKFEVLQTLPGHA 322

Query: 183  KSLDFSQKGLLATSTGSFVQVLATSQDSQNYDRYMIHTMSKGYQVHKVLFRPYEDVLGIG 362
            K+LDFSQKGLLAT TGSFVQ+L     ++NY RYM H+M+KGYQ+ KVLFRPYEDVL IG
Sbjct: 323  KTLDFSQKGLLATGTGSFVQILGDFSGTENYSRYMGHSMAKGYQIGKVLFRPYEDVLSIG 382

Query: 363  HSMGLSSVLIPGSGEPNFDSWVANPYETSKQRREKEVRLLLDKLPPESIMLDPTKIGTLR 542
            HSMG S +LIPGSGEPNFDSWVANP+ETSKQRREKEV  LLDKLPPE+IMLDPTKIGT+R
Sbjct: 383  HSMGWSCILIPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLDPTKIGTVR 442

Query: 543  STRKKEKPTKQXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXIATKKLEGVEQAKRPFVEQ 722
             +RK+EKPTKQ              S                  K+ E V +AK+PF+E+
Sbjct: 443  QSRKREKPTKQERKAEMEAAVEDAKSIPLRKKMKGKNKPSKKVKKREEAVARAKKPFLER 502

Query: 723  KREDGSVKKKQKRITETSELPVSLQPFVSRK 815
            + E+ ++  K+++I+   ELP SLQ F  +K
Sbjct: 503  QMEEENLSTKKQKISGEIELPKSLQRFARKK 533


>ref|XP_004138833.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 7-like
            [Cucumis sativus] gi|449528879|ref|XP_004171429.1|
            PREDICTED: probable U3 small nucleolar RNA-associated
            protein 7-like [Cucumis sativus]
          Length = 536

 Score =  343 bits (879), Expect = 8e-92
 Identities = 166/272 (61%), Positives = 207/272 (76%)
 Frame = +3

Query: 3    SMWKPTSAAPLVKMLCHHGPVTAVTFHPSGHLMATAGMDKKLKIWDLRKYKVLQTLPGHA 182
            +MWKPTS+APLVKMLCH GPV+A+ FHP+GHLMAT+G ++K+K+WDLRK++VLQTLPGHA
Sbjct: 263  AMWKPTSSAPLVKMLCHPGPVSALAFHPNGHLMATSGAERKIKLWDLRKFEVLQTLPGHA 322

Query: 183  KSLDFSQKGLLATSTGSFVQVLATSQDSQNYDRYMIHTMSKGYQVHKVLFRPYEDVLGIG 362
            K+LDFSQKGLLA  TGSFVQ+L     +QNY+RYM H+M+KGYQ+ K+LFRPYEDVLGIG
Sbjct: 323  KTLDFSQKGLLAYGTGSFVQILGDFSGAQNYNRYMAHSMAKGYQIGKILFRPYEDVLGIG 382

Query: 363  HSMGLSSVLIPGSGEPNFDSWVANPYETSKQRREKEVRLLLDKLPPESIMLDPTKIGTLR 542
            HSMG SS+LIPGSGEPNFD+WVANP+ETSKQRREKEVR LLDKLPPE+I L+PTKIGTL 
Sbjct: 383  HSMGWSSILIPGSGEPNFDTWVANPFETSKQRREKEVRSLLDKLPPETISLNPTKIGTLM 442

Query: 543  STRKKEKPTKQXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXIATKKLEGVEQAKRPFVEQ 722
            + +KKEK TK+                                 KK E +E+AKRPF+ +
Sbjct: 443  AVKKKEKKTKKERDAEEEAAVDAAKGITMKKKTKGRNKPTKREKKKHEIIEKAKRPFLHE 502

Query: 723  KREDGSVKKKQKRITETSELPVSLQPFVSRKT 818
            + ++  + +K+ R++E  ELP SLQ F  +KT
Sbjct: 503  QIKEEELSRKKSRLSEEVELPKSLQRFARKKT 534


>ref|XP_002531133.1| WD-repeat protein, putative [Ricinus communis]
            gi|223529282|gb|EEF31253.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 526

 Score =  340 bits (873), Expect = 4e-91
 Identities = 164/274 (59%), Positives = 208/274 (75%), Gaps = 1/274 (0%)
 Frame = +3

Query: 3    SMWKPTSAAPLVKMLCHHGPVTAVTFHPSGHLMATAGMDKKLKIWDLRKYKVLQTLPGHA 182
            +MWKPTSAAPL+KMLCH GPV A+ FHP+GHLMAT+GM++K+KIWDLRK++VLQT+PGHA
Sbjct: 252  TMWKPTSAAPLIKMLCHPGPVLAMAFHPNGHLMATSGMERKIKIWDLRKFEVLQTIPGHA 311

Query: 183  KSLDFSQKGLLATSTGSFVQVLATSQDSQNYDRYMIHTMSKGYQVHKVLFRPYEDVLGIG 362
            K+LDFSQ GLLAT TGS+VQ+L     SQ+Y RYM H M KGY++ KVLFRPYEDVLGIG
Sbjct: 312  KTLDFSQNGLLATGTGSYVQILGDFSGSQSYSRYMGHPMVKGYEIRKVLFRPYEDVLGIG 371

Query: 363  HSMGLSSVLIPGSGEPNFDSWVANPYETSKQRREKEVRLLLDKLPPESIMLDPTKIGTLR 542
            HSMG SS+L PGSGEPNFDSW+ANP+ETSKQRREKEVR LLDKLPPE+IMLDP+KIGT+R
Sbjct: 372  HSMGWSSILTPGSGEPNFDSWLANPFETSKQRREKEVRTLLDKLPPETIMLDPSKIGTVR 431

Query: 543  STRKKEKPTKQXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXIATKKLEGVEQAKRPFVEQ 722
              +K++KPTKQ                                 K+ E +++ KRPF++Q
Sbjct: 432  PVKKRDKPTKQEIAAEMEAAVEAVKDVAVKNKTKGRSKASNKLKKRKELIDKVKRPFLDQ 491

Query: 723  K-REDGSVKKKQKRITETSELPVSLQPFVSRKTM 821
            + +E+  + KK+++I + +ELPV+LQ F  +K +
Sbjct: 492  QMKEEEKLAKKKQKIGQDNELPVALQRFKQKKAI 525


>ref|XP_003556293.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 7-like
            [Glycine max]
          Length = 535

 Score =  334 bits (856), Expect = 4e-89
 Identities = 165/272 (60%), Positives = 203/272 (74%), Gaps = 1/272 (0%)
 Frame = +3

Query: 3    SMWKPTSAAPLVKMLCHHGPVTAVTFHPSGHLMATAGMDKKLKIWDLRKYKVLQTLPGHA 182
            +MWKPTSA+PLVKMLCHHGPV+A+ FH +GHLMATAG DKK+K+WDLRK++VLQTLPGHA
Sbjct: 263  TMWKPTSASPLVKMLCHHGPVSALAFHSNGHLMATAGKDKKIKLWDLRKFEVLQTLPGHA 322

Query: 183  KSLDFSQKGLLATSTGSFVQVLATSQDSQNYDRYMIHTMSKGYQVHKVLFRPYEDVLGIG 362
             +LDFSQKGLLA   GS +QVL     +QNY +YM H+M KGYQ+ K++FRPYEDVLGIG
Sbjct: 323  TTLDFSQKGLLACGNGSLIQVLRDVSGTQNYSKYMTHSMVKGYQIGKLVFRPYEDVLGIG 382

Query: 363  HSMGLSSVLIPGSGEPNFDSWVANPYETSKQRREKEVRLLLDKLPPESIMLDPTKIGTLR 542
            HSMG SS+LIPG+GEPNFDSWVANP+ETSKQRREKE+R LLDKLPPE+IMLDP+KIGT++
Sbjct: 383  HSMGWSSILIPGAGEPNFDSWVANPFETSKQRREKEIRSLLDKLPPETIMLDPSKIGTVK 442

Query: 543  STRKKEKPTKQXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXIATKKLEGVEQAKRPFVEQ 722
               ++EKPTKQ                                 KK E V + KRP++EQ
Sbjct: 443  P--RREKPTKQEREAEIEADVEAAKGKKLKKKTKGRNKPGKRVQKKQEAVARVKRPYLEQ 500

Query: 723  K-REDGSVKKKQKRITETSELPVSLQPFVSRK 815
            K +E+ S+ +K+++  E  ELP SLQ FV +K
Sbjct: 501  KIQEEESISRKKQKTREGVELPKSLQRFVRKK 532


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