BLASTX nr result

ID: Atractylodes22_contig00009217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009217
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34587.3| unnamed protein product [Vitis vinifera]               69   5e-10
ref|XP_002280081.1| PREDICTED: mediator of RNA polymerase II tra...    69   5e-10
ref|XP_002303692.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002527873.1| nut2, putative [Ricinus communis] gi|2235327...    67   2e-09
ref|XP_002299427.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>emb|CBI34587.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/40 (82%), Positives = 37/40 (92%)
 Frame = +3

Query: 3   FPDEVEDYREIRASSAAESIRLAQAQSILPNGDVKVKPEM 122
           FPDEVE YREIRA+SAAES RLAQAQS+LPNGD+KVK E+
Sbjct: 245 FPDEVESYREIRAASAAESKRLAQAQSVLPNGDLKVKTEL 284


>ref|XP_002280081.1| PREDICTED: mediator of RNA polymerase II transcription subunit 10
           [Vitis vinifera]
          Length = 194

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/40 (82%), Positives = 37/40 (92%)
 Frame = +3

Query: 3   FPDEVEDYREIRASSAAESIRLAQAQSILPNGDVKVKPEM 122
           FPDEVE YREIRA+SAAES RLAQAQS+LPNGD+KVK E+
Sbjct: 155 FPDEVESYREIRAASAAESKRLAQAQSVLPNGDLKVKTEL 194


>ref|XP_002303692.1| predicted protein [Populus trichocarpa] gi|222841124|gb|EEE78671.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/39 (84%), Positives = 35/39 (89%)
 Frame = +3

Query: 3   FPDEVEDYREIRASSAAESIRLAQAQSILPNGDVKVKPE 119
           FPDEVE YREIRA SAAE+ RLAQ+QS LPNGDVKVKPE
Sbjct: 146 FPDEVESYREIRAMSAAEAKRLAQSQSSLPNGDVKVKPE 184


>ref|XP_002527873.1| nut2, putative [Ricinus communis] gi|223532724|gb|EEF34504.1| nut2,
           putative [Ricinus communis]
          Length = 187

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/40 (85%), Positives = 35/40 (87%)
 Frame = +3

Query: 3   FPDEVEDYREIRASSAAESIRLAQAQSILPNGDVKVKPEM 122
           FPDEVE YREIRA SAAES RLAQAQS LPNGDVKVK E+
Sbjct: 148 FPDEVESYREIRAISAAESKRLAQAQSSLPNGDVKVKSEL 187


>ref|XP_002299427.1| predicted protein [Populus trichocarpa] gi|222846685|gb|EEE84232.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/40 (82%), Positives = 35/40 (87%)
 Frame = +3

Query: 3   FPDEVEDYREIRASSAAESIRLAQAQSILPNGDVKVKPEM 122
           FPDEVE YREIRA SAAE+ RLAQAQS LPNGDVKVK E+
Sbjct: 151 FPDEVESYREIRAMSAAEAKRLAQAQSSLPNGDVKVKAEL 190


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