BLASTX nr result

ID: Atractylodes22_contig00009215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009215
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34587.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002280081.1| PREDICTED: mediator of RNA polymerase II tra...    56   3e-06
emb|CAN83497.1| hypothetical protein VITISV_026967 [Vitis vinifera]    56   3e-06

>emb|CBI34587.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +2

Query: 5   LRRHLLEELEQAFPDEVEDYREIRASSAA 91
           LRRHLLEELEQAFPDEVE YREIRA+SAA
Sbjct: 233 LRRHLLEELEQAFPDEVESYREIRAASAA 261


>ref|XP_002280081.1| PREDICTED: mediator of RNA polymerase II transcription subunit 10
           [Vitis vinifera]
          Length = 194

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +2

Query: 5   LRRHLLEELEQAFPDEVEDYREIRASSAA 91
           LRRHLLEELEQAFPDEVE YREIRA+SAA
Sbjct: 143 LRRHLLEELEQAFPDEVESYREIRAASAA 171


>emb|CAN83497.1| hypothetical protein VITISV_026967 [Vitis vinifera]
          Length = 209

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +2

Query: 5   LRRHLLEELEQAFPDEVEDYREIRASSAA 91
           LRRHLLEELEQAFPDEVE YREIRA+SAA
Sbjct: 149 LRRHLLEELEQAFPDEVESYREIRAASAA 177


Top