BLASTX nr result
ID: Atractylodes22_contig00009188
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00009188
(1650 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABB86262.1| unknown [Solanum tuberosum] 380 e-114
ref|XP_002285426.1| PREDICTED: heterogeneous nuclear ribonucleop... 341 4e-91
ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, put... 340 5e-91
ref|XP_004142112.1| PREDICTED: heterogeneous nuclear ribonucleop... 328 3e-87
ref|XP_002313339.1| predicted protein [Populus trichocarpa] gi|2... 324 4e-86
>gb|ABB86262.1| unknown [Solanum tuberosum]
Length = 364
Score = 380 bits (976), Expect(2) = e-114
Identities = 198/330 (60%), Positives = 236/330 (71%), Gaps = 11/330 (3%)
Frame = +3
Query: 375 MFYRGKYVDVGDGREMGLKRQRVIDQGXXXXXXXXXXXXXXXXXXXXXV------NQPPA 536
M+YRG Y+D GD REMG KRQR++DQG QPP
Sbjct: 1 MYYRGNYMDSGDAREMGFKRQRIMDQGSSYYATPPGSSYMYNPPPPPPPPSYSYHGQPPP 60
Query: 537 FPVVRLRGLPFDCSEADIAEFFHGLDIVDVLFVHRHGKFAGEVYCVLGYAFQVEYALQRN 716
FPVVRLRGLPFDCSE +IA+F HGLD+VDVL VH+ G+F GE YCVLGY QV++ALQRN
Sbjct: 61 FPVVRLRGLPFDCSETEIADFLHGLDVVDVLLVHKGGRFTGEAYCVLGYPLQVDFALQRN 120
Query: 717 RQNIGRRYVEVFRSKRQEYYKAIANEVXXXXXXXXXXXXXXXXKASDSGRDNAEHTGVLR 896
RQNIGRRYVEVFRSK++EYYKAIANEV +++D + EHTGVL
Sbjct: 121 RQNIGRRYVEVFRSKKEEYYKAIANEV-----YDSRGGSVPRARSADESKTLPEHTGVLW 175
Query: 897 LRGLPFSANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAAMVKDGM 1076
LRGLPFSA+++DI+DFF D L E SI+ T EGR TGEAFV+FAS +DSRAAM KD M
Sbjct: 176 LRGLPFSASKEDIIDFFKDFELPEKSIHITATFEGRPTGEAFVEFASADDSRAAMAKDRM 235
Query: 1077 SLGSRYIELFPSTLEEWEDAASRGRANVPKPCD-----EETTVLRMRGLPFSAGKDDIID 1241
++G+RYIELF S+ EE E+A SRGR + KP D E T++LRMRGLPFSAGKDDI+D
Sbjct: 236 TIGNRYIELFASSSEELEEAVSRGRV-LEKPVDGRDPNEVTSILRMRGLPFSAGKDDIMD 294
Query: 1242 FFKEFTLSEDSIHMTFNSEGRPTGEALVEF 1331
FFK+F L+ED+IH+TF S+GRPTGEA VEF
Sbjct: 295 FFKDFALTEDAIHVTFLSDGRPTGEAFVEF 324
Score = 60.5 bits (145), Expect(2) = e-114
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +1
Query: 1402 SLDDSKAALAKDRMTLGSRYIELFMSSPEELRDAVSRGR 1518
S DD+KAALAKDRMTLGSRY+ELF SS E++ A+SRGR
Sbjct: 326 STDDAKAALAKDRMTLGSRYVELFPSSIEDMNHAISRGR 364
Score = 158 bits (400), Expect = 4e-36
Identities = 87/206 (42%), Positives = 124/206 (60%), Gaps = 3/206 (1%)
Frame = +3
Query: 543 VVRLRGLPFDCSEADIAEFFHGLDIVDV---LFVHRHGKFAGEVYCVLGYAFQVEYALQR 713
V+ LRGLPF S+ DI +FF ++ + + G+ GE + A A+ +
Sbjct: 173 VLWLRGLPFSASKEDIIDFFKDFELPEKSIHITATFEGRPTGEAFVEFASADDSRAAMAK 232
Query: 714 NRQNIGRRYVEVFRSKRQEYYKAIANEVXXXXXXXXXXXXXXXXKASDSGRDNAEHTGVL 893
+R IG RY+E+F S +E +A++ + GRD E T +L
Sbjct: 233 DRMTIGNRYIELFASSSEELEEAVSR--------------GRVLEKPVDGRDPNEVTSIL 278
Query: 894 RLRGLPFSANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAAMVKDG 1073
R+RGLPFSA +DDI+DFF D L+ED+I+ T S+GR TGEAFV+FAS +D++AA+ KD
Sbjct: 279 RMRGLPFSAGKDDIMDFFKDFALTEDAIHVTFLSDGRPTGEAFVEFASTDDAKAALAKDR 338
Query: 1074 MSLGSRYIELFPSTLEEWEDAASRGR 1151
M+LGSRY+ELFPS++E+ A SRGR
Sbjct: 339 MTLGSRYVELFPSSIEDMNHAISRGR 364
Score = 62.8 bits (151), Expect = 3e-07
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = +1
Query: 1402 SLDDSKAALAKDRMTLGSRYIELFMSSPEELRDAVSRGR 1518
S DDS+AA+AKDRMT+G+RYIELF SS EEL +AVSRGR
Sbjct: 222 SADDSRAAMAKDRMTIGNRYIELFASSSEELEEAVSRGR 260
>ref|XP_002285426.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Vitis
vinifera]
Length = 258
Score = 341 bits (874), Expect = 4e-91
Identities = 171/259 (66%), Positives = 199/259 (76%)
Frame = +3
Query: 375 MFYRGKYVDVGDGREMGLKRQRVIDQGXXXXXXXXXXXXXXXXXXXXXVNQPPAFPVVRL 554
MFYRGKY D DGR+MG KRQR+ DQG + QPP FPVVRL
Sbjct: 1 MFYRGKYADGLDGRDMGPKRQRITDQGSSFYGGSPGSNFMYNASPYSYIGQPPPFPVVRL 60
Query: 555 RGLPFDCSEADIAEFFHGLDIVDVLFVHRHGKFAGEVYCVLGYAFQVEYALQRNRQNIGR 734
RGLPFDCSEAD+AEFFH LDIVDVLFVH++G+F GE +CVLGY QVE+ALQRNRQN+GR
Sbjct: 61 RGLPFDCSEADVAEFFHSLDIVDVLFVHKNGRFTGEAFCVLGYPLQVEFALQRNRQNMGR 120
Query: 735 RYVEVFRSKRQEYYKAIANEVXXXXXXXXXXXXXXXXKASDSGRDNAEHTGVLRLRGLPF 914
RYVEVFRSKRQEYYKAIANEV K++D G+++AEHTGVLRLRGLPF
Sbjct: 121 RYVEVFRSKRQEYYKAIANEV-SDTRGGSPRRTAPKAKSNDEGKESAEHTGVLRLRGLPF 179
Query: 915 SANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAAMVKDGMSLGSRY 1094
SA+++DI+DFF D VLSEDSI+ TVNSEGR TGEAFV+F + EDS+AAM KD M+LGSRY
Sbjct: 180 SASKEDIMDFFKDFVLSEDSIHMTVNSEGRPTGEAFVEFTNAEDSKAAMAKDRMTLGSRY 239
Query: 1095 IELFPSTLEEWEDAASRGR 1151
IELFPS+LEE ++A +RGR
Sbjct: 240 IELFPSSLEELDEAVARGR 258
Score = 129 bits (324), Expect(2) = 5e-39
Identities = 78/165 (47%), Positives = 100/165 (60%), Gaps = 17/165 (10%)
Frame = +3
Query: 888 VLRLRGLPFSANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAAMVK 1067
V+RLRGLPF + D+ +FF+ L + F V+ GR TGEAF P A+ +
Sbjct: 57 VVRLRGLPFDCSEADVAEFFHS--LDIVDVLF-VHKNGRFTGEAFCVLGYPLQVEFALQR 113
Query: 1068 DGMSLGSRYIELFPSTLEEW------EDAASRG---RANVPKPCD--------EETTVLR 1196
+ ++G RY+E+F S +E+ E + +RG R PK E T VLR
Sbjct: 114 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDTRGGSPRRTAPKAKSNDEGKESAEHTGVLR 173
Query: 1197 MRGLPFSAGKDDIIDFFKEFTLSEDSIHMTFNSEGRPTGEALVEF 1331
+RGLPFSA K+DI+DFFK+F LSEDSIHMT NSEGRPTGEA VEF
Sbjct: 174 LRGLPFSASKEDIMDFFKDFVLSEDSIHMTVNSEGRPTGEAFVEF 218
Score = 60.1 bits (144), Expect(2) = 5e-39
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 1408 DDSKAALAKDRMTLGSRYIELFMSSPEELRDAVSRGR 1518
+DSKAA+AKDRMTLGSRYIELF SS EEL +AV+RGR
Sbjct: 222 EDSKAAMAKDRMTLGSRYIELFPSSLEELDEAVARGR 258
>ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus communis]
gi|223547409|gb|EEF48904.1| heterogeneous nuclear
ribonucleoprotein, putative [Ricinus communis]
Length = 260
Score = 340 bits (873), Expect = 5e-91
Identities = 170/261 (65%), Positives = 200/261 (76%)
Frame = +3
Query: 369 NKMFYRGKYVDVGDGREMGLKRQRVIDQGXXXXXXXXXXXXXXXXXXXXXVNQPPAFPVV 548
++MFYRG+Y D GDGREMG KRQR++DQG V QPP FPVV
Sbjct: 2 DRMFYRGRYPDGGDGREMGAKRQRLVDQGPSYYGTSPGPSFMYNPPPYGYVAQPPPFPVV 61
Query: 549 RLRGLPFDCSEADIAEFFHGLDIVDVLFVHRHGKFAGEVYCVLGYAFQVEYALQRNRQNI 728
RLRGLPFDC+E D+AEFFHGLDIVDVLFVH+ GKF GE +CVLG QV++ALQ+NRQN+
Sbjct: 62 RLRGLPFDCTETDVAEFFHGLDIVDVLFVHKGGKFTGEAFCVLGCPLQVDFALQKNRQNM 121
Query: 729 GRRYVEVFRSKRQEYYKAIANEVXXXXXXXXXXXXXXXXKASDSGRDNAEHTGVLRLRGL 908
GRRYVEVFRSKRQ+YYKAIANEV K+ D G+D+AEHTGVLRLRGL
Sbjct: 122 GRRYVEVFRSKRQDYYKAIANEV--SDARGGSPRRAPRAKSYDEGKDSAEHTGVLRLRGL 179
Query: 909 PFSANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAAMVKDGMSLGS 1088
PFSA +DDI++FF D VLSEDS++ T+NSEGR TGEAFV+FAS EDS+AAM KD M+LGS
Sbjct: 180 PFSAGKDDIMEFFKDFVLSEDSVHITMNSEGRPTGEAFVEFASAEDSKAAMAKDRMTLGS 239
Query: 1089 RYIELFPSTLEEWEDAASRGR 1151
RYIELFPS++EE E+A +RGR
Sbjct: 240 RYIELFPSSIEELEEAVTRGR 260
Score = 127 bits (320), Expect(2) = 4e-39
Identities = 75/164 (45%), Positives = 97/164 (59%), Gaps = 16/164 (9%)
Frame = +3
Query: 888 VLRLRGLPFSANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAAMVK 1067
V+RLRGLPF D+ +FF+ L + F V+ G+ TGEAF P A+ K
Sbjct: 60 VVRLRGLPFDCTETDVAEFFHG--LDIVDVLF-VHKGGKFTGEAFCVLGCPLQVDFALQK 116
Query: 1068 DGMSLGSRYIELFPSTLEEWEDA----ASRGRANVP------------KPCDEETTVLRM 1199
+ ++G RY+E+F S +++ A S R P K E T VLR+
Sbjct: 117 NRQNMGRRYVEVFRSKRQDYYKAIANEVSDARGGSPRRAPRAKSYDEGKDSAEHTGVLRL 176
Query: 1200 RGLPFSAGKDDIIDFFKEFTLSEDSIHMTFNSEGRPTGEALVEF 1331
RGLPFSAGKDDI++FFK+F LSEDS+H+T NSEGRPTGEA VEF
Sbjct: 177 RGLPFSAGKDDIMEFFKDFVLSEDSVHITMNSEGRPTGEAFVEF 220
Score = 62.0 bits (149), Expect(2) = 4e-39
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = +1
Query: 1402 SLDDSKAALAKDRMTLGSRYIELFMSSPEELRDAVSRGR 1518
S +DSKAA+AKDRMTLGSRYIELF SS EEL +AV+RGR
Sbjct: 222 SAEDSKAAMAKDRMTLGSRYIELFPSSIEELEEAVTRGR 260
>ref|XP_004142112.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
sativus] gi|449502606|ref|XP_004161690.1| PREDICTED: LOW
QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein
F-like [Cucumis sativus]
Length = 260
Score = 328 bits (840), Expect = 3e-87
Identities = 163/259 (62%), Positives = 193/259 (74%)
Frame = +3
Query: 375 MFYRGKYVDVGDGREMGLKRQRVIDQGXXXXXXXXXXXXXXXXXXXXXVNQPPAFPVVRL 554
MFYRG Y D GDGREMG KRQR++DQG VNQPP FPVVRL
Sbjct: 3 MFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRL 62
Query: 555 RGLPFDCSEADIAEFFHGLDIVDVLFVHRHGKFAGEVYCVLGYAFQVEYALQRNRQNIGR 734
RGLPFDC E D+ EFFHGLDIVD+LFVH++GKF GE +CVLGY QV++ALQRNRQN+GR
Sbjct: 63 RGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGR 122
Query: 735 RYVEVFRSKRQEYYKAIANEVXXXXXXXXXXXXXXXXKASDSGRDNAEHTGVLRLRGLPF 914
RYVE+FRS RQEYYKA+ANEV K +D +D+AEHTGVLRLRGLP+
Sbjct: 123 RYVEIFRSNRQEYYKAVANEV-FDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPY 181
Query: 915 SANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAAMVKDGMSLGSRY 1094
SA +DDI+DFF LSEDSI+ T+NSEGR +GEAFV+F++ +DS+AAM KD M+LGSRY
Sbjct: 182 SAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRY 241
Query: 1095 IELFPSTLEEWEDAASRGR 1151
IELFPS+ EE ++A SRGR
Sbjct: 242 IELFPSSHEELDEAISRGR 260
Score = 127 bits (318), Expect(2) = 4e-38
Identities = 77/165 (46%), Positives = 99/165 (60%), Gaps = 17/165 (10%)
Frame = +3
Query: 888 VLRLRGLPFSANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAAMVK 1067
V+RLRGLPF D+V+FF+ L I F V+ G+ TGE F P A+ +
Sbjct: 59 VVRLRGLPFDCMETDVVEFFHG--LDIVDILF-VHKNGKFTGEGFCVLGYPLQVDFALQR 115
Query: 1068 DGMSLGSRYIELFPSTLEEWEDAAS------RG---RANVP--------KPCDEETTVLR 1196
+ ++G RY+E+F S +E+ A + RG R + P K E T VLR
Sbjct: 116 NRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLR 175
Query: 1197 MRGLPFSAGKDDIIDFFKEFTLSEDSIHMTFNSEGRPTGEALVEF 1331
+RGLP+SAGKDDI+DFFK F LSEDSIH+T NSEGRP+GEA VEF
Sbjct: 176 LRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEF 220
Score = 59.3 bits (142), Expect(2) = 4e-38
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +1
Query: 1411 DSKAALAKDRMTLGSRYIELFMSSPEELRDAVSRGR 1518
DSKAA++KDRMTLGSRYIELF SS EEL +A+SRGR
Sbjct: 225 DSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR 260
>ref|XP_002313339.1| predicted protein [Populus trichocarpa] gi|222849747|gb|EEE87294.1|
predicted protein [Populus trichocarpa]
Length = 253
Score = 324 bits (831), Expect = 4e-86
Identities = 165/259 (63%), Positives = 195/259 (75%)
Frame = +3
Query: 375 MFYRGKYVDVGDGREMGLKRQRVIDQGXXXXXXXXXXXXXXXXXXXXXVNQPPAFPVVRL 554
MFYRG DGREMG KRQR+ D+G +QPP FPVVRL
Sbjct: 1 MFYRG----YPDGREMGAKRQRIADKGPSFYANSPGSSFMYNAPPNGYASQPPHFPVVRL 56
Query: 555 RGLPFDCSEADIAEFFHGLDIVDVLFVHRHGKFAGEVYCVLGYAFQVEYALQRNRQNIGR 734
RGLPFDC+E D+AEFFHGLDIVDVLFVH+ GKF+GE +CVLGY QV++ALQ+NRQN+GR
Sbjct: 57 RGLPFDCTETDVAEFFHGLDIVDVLFVHKGGKFSGEAFCVLGYPLQVDFALQKNRQNMGR 116
Query: 735 RYVEVFRSKRQEYYKAIANEVXXXXXXXXXXXXXXXXKASDSGRDNAEHTGVLRLRGLPF 914
RYVEVFRSKRQ+YYK IANEV K+ D G+D+AEHTGVLRLRGLPF
Sbjct: 117 RYVEVFRSKRQDYYKTIANEV--SESRGSPRRNIPRAKSYDEGKDSAEHTGVLRLRGLPF 174
Query: 915 SANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAAMVKDGMSLGSRY 1094
SA++DDI++FF D VLSEDSI+ T+NSEGR TGEAFV+FA+ EDS+AAM KD M+LGSRY
Sbjct: 175 SASKDDIMEFFKDFVLSEDSIHITMNSEGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRY 234
Query: 1095 IELFPSTLEEWEDAASRGR 1151
IELFPS++EE ++A SRGR
Sbjct: 235 IELFPSSVEESDEAVSRGR 253
Score = 130 bits (327), Expect(2) = 4e-39
Identities = 78/167 (46%), Positives = 102/167 (61%), Gaps = 16/167 (9%)
Frame = +3
Query: 879 HTGVLRLRGLPFSANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAA 1058
H V+RLRGLPF D+ +FF+ L + F V+ G+ +GEAF P A
Sbjct: 50 HFPVVRLRGLPFDCTETDVAEFFHG--LDIVDVLF-VHKGGKFSGEAFCVLGYPLQVDFA 106
Query: 1059 MVKDGMSLGSRYIELFPSTLEEW------EDAASRG--RANVP--------KPCDEETTV 1190
+ K+ ++G RY+E+F S +++ E + SRG R N+P K E T V
Sbjct: 107 LQKNRQNMGRRYVEVFRSKRQDYYKTIANEVSESRGSPRRNIPRAKSYDEGKDSAEHTGV 166
Query: 1191 LRMRGLPFSAGKDDIIDFFKEFTLSEDSIHMTFNSEGRPTGEALVEF 1331
LR+RGLPFSA KDDI++FFK+F LSEDSIH+T NSEGRPTGEA VEF
Sbjct: 167 LRLRGLPFSASKDDIMEFFKDFVLSEDSIHITMNSEGRPTGEAFVEF 213
Score = 59.3 bits (142), Expect(2) = 4e-39
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1
Query: 1408 DDSKAALAKDRMTLGSRYIELFMSSPEELRDAVSRGR 1518
+DSKAA+AKDRMTLGSRYIELF SS EE +AVSRGR
Sbjct: 217 EDSKAAMAKDRMTLGSRYIELFPSSVEESDEAVSRGR 253