BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009105
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]   442   e-122
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   442   e-122
ref|XP_002530618.1| TFIIH basal transcription factor complex sub...   372   e-100
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab...   356   5e-96
ref|NP_175971.3| transcription initiation factor TFIIH subunit H...   355   7e-96

>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
          Length = 735

 Score =  442 bits (1138), Expect = e-122
 Identities = 219/316 (69%), Positives = 258/316 (81%)
 Frame = +2

Query: 2    SDGQSNRVTFNLTPEMIHQIFAEKPAVRQAYLNFVPNKMTEKDFWTKYWRAQYLHSTKNI 181
            +DG++NRVTFNLTPE+IHQIFAEKPAV QA+LNFVPNKMTEKDFW KY RA+YLH T+N 
Sbjct: 236  TDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTRNT 295

Query: 182  VXXXXXXXXXXXXXVFLKQDAILASETRQKIRKVDPTLDMEADEGDDYTHIPGHGLAIES 361
            V             VFLK D ILASE R+KIR+VDPTLDMEAD+GDDY H+P HG+  + 
Sbjct: 296  VAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDG 355

Query: 362  SKDEIEAQYEPFKRSFLQDINRHAAVVLEGRTVDVETGDTRSVAEALASSKRIELAKEAS 541
            SK+ I+ QYE ++R+  QD+NRHAAVVLEGR +DVE  DTR+VAEALA SKR+E A E S
Sbjct: 356  SKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKS 415

Query: 542  DGNVHQERLDRIYRMAEIEDLQAPRDPPVAPLCIKDPRDYFDSQQVNALKVMGDQLAGTR 721
            DG+V +ERL+RI RM EIEDLQAPRD P A LCIKDPRDYFDSQQ NALK +GD LAG++
Sbjct: 416  DGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSK 475

Query: 722  HMKSRLSISEAYGSLRVFISEIRNVGLSEPIVKPEVAVKVFNGLTQNISSSKYQLGKNPH 901
             +K  LS  EAYGSLR FISEI++VGLS+PIVKP++A+KV NGLTQNISS+K+ LGKNP 
Sbjct: 476  QIKCSLSSQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQ 535

Query: 902  ESILDTLPSVTKEELL 949
            ES+LD LP +TKEELL
Sbjct: 536  ESVLDRLPIITKEELL 551


>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed
            protein product [Vitis vinifera]
          Length = 602

 Score =  442 bits (1136), Expect = e-122
 Identities = 218/316 (68%), Positives = 258/316 (81%)
 Frame = +2

Query: 2    SDGQSNRVTFNLTPEMIHQIFAEKPAVRQAYLNFVPNKMTEKDFWTKYWRAQYLHSTKNI 181
            +DG++NRVTFNLTPE+IHQIFAEKPAV QA+LNFVPNKMTEKDFW KY RA+YLH T+N 
Sbjct: 193  TDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTRNT 252

Query: 182  VXXXXXXXXXXXXXVFLKQDAILASETRQKIRKVDPTLDMEADEGDDYTHIPGHGLAIES 361
            V             VFLK D ILA+E R+KIR+VDPTLDMEAD+GDDY H+P HG+  + 
Sbjct: 253  VAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDG 312

Query: 362  SKDEIEAQYEPFKRSFLQDINRHAAVVLEGRTVDVETGDTRSVAEALASSKRIELAKEAS 541
            SK+ I+ QYE ++R+  QD+NRHAAVVLEGR +DVE  DTR+VAEALA SKR+E A E S
Sbjct: 313  SKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKS 372

Query: 542  DGNVHQERLDRIYRMAEIEDLQAPRDPPVAPLCIKDPRDYFDSQQVNALKVMGDQLAGTR 721
            DG+V +ERL+RI RM EIEDLQAPRD P A LCIKDPRDYFDSQQ NALK +GD LAG++
Sbjct: 373  DGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSK 432

Query: 722  HMKSRLSISEAYGSLRVFISEIRNVGLSEPIVKPEVAVKVFNGLTQNISSSKYQLGKNPH 901
             +K  LS  EAYGSLR FISEI++VGLS+PIVKP++A+KV NGLTQNISS+K+ LGKNP 
Sbjct: 433  QIKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQ 492

Query: 902  ESILDTLPSVTKEELL 949
            ES+LD LP +TKEELL
Sbjct: 493  ESVLDRLPIITKEELL 508


>ref|XP_002530618.1| TFIIH basal transcription factor complex subunit, putative [Ricinus
            communis] gi|223529828|gb|EEF31761.1| TFIIH basal
            transcription factor complex subunit, putative [Ricinus
            communis]
          Length = 597

 Score =  372 bits (954), Expect = e-100
 Identities = 192/317 (60%), Positives = 238/317 (75%), Gaps = 2/317 (0%)
 Frame = +2

Query: 5    DGQSNRVTFNLTPEMIHQIFAEKPAVRQAYLNFVPNKMTEKDFWTKYWRAQYLHSTKNIV 184
            DGQ+N+VTFNLTPE++ +IFAEKPAV QAYL+ VPNKM+E+DFWTKY RA+YL  ++NI 
Sbjct: 189  DGQTNKVTFNLTPEIVREIFAEKPAVHQAYLSLVPNKMSERDFWTKYCRAEYLQRSRNIH 248

Query: 185  XXXXXXXXXXXXXVFLKQDAILASETRQKIRKVDPTLDMEADEGDDYTHIPGHGLAIESS 364
                         +FLK D ILASETRQKIR VDPTLDMEAD+GDDYTH+P HG+  + S
Sbjct: 249  AAAAEAAEDEELALFLKPDDILASETRQKIRCVDPTLDMEADQGDDYTHLPDHGIVRDGS 308

Query: 365  KDEIEAQYEPFKRSFLQDINRHAAVVLEGRTVDVET-GDTRSVAEALASSKR-IELAKEA 538
            KD IE+Q+EP++R+ LQD+NRHAAVVLEG  +D E   DT++VA+ALA SKR I+     
Sbjct: 309  KDVIESQHEPYRRTLLQDLNRHAAVVLEGTAIDDEQLQDTKAVADALARSKRGIKTINRE 368

Query: 539  SDGNVHQERLDRIYRMAEIEDLQAPRDPPVAPLCIKDPRDYFDSQQVNALKVMGDQLAGT 718
            +DGN +QER +RI +M EIEDLQ   D  +APLCIKDPRDYFDSQQ +ALK   D  +GT
Sbjct: 369  ADGNANQERSNRISQMMEIEDLQGSNDHHLAPLCIKDPRDYFDSQQASALKNSRDIPSGT 428

Query: 719  RHMKSRLSISEAYGSLRVFISEIRNVGLSEPIVKPEVAVKVFNGLTQNISSSKYQLGKNP 898
               +  LS  EAY SLR  I++ + +GL++PIVKPE+A KV + LT NISS+KY LGKN 
Sbjct: 429  EAARCSLSSQEAYASLRDSITQTKAMGLNDPIVKPEIATKVLSILTHNISSTKYHLGKNS 488

Query: 899  HESILDTLPSVTKEELL 949
             ES+LD LP+  KEELL
Sbjct: 489  RESVLDRLPNTIKEELL 505


>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
            lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
            ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
          Length = 592

 Score =  356 bits (913), Expect = 5e-96
 Identities = 182/316 (57%), Positives = 237/316 (75%)
 Frame = +2

Query: 2    SDGQSNRVTFNLTPEMIHQIFAEKPAVRQAYLNFVPNKMTEKDFWTKYWRAQYLHSTKNI 181
            +DG++NRVTFNLTPE+I QIFAEKPAVRQA++N+VP+KMTEKDFWTKY+RA+YL+STKN 
Sbjct: 188  TDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEYLYSTKNT 247

Query: 182  VXXXXXXXXXXXXXVFLKQDAILASETRQKIRKVDPTLDMEADEGDDYTHIPGHGLAIES 361
                          VFLK D ILA ETRQKIR+VDPTLDMEAD+GDDYTH+  HG+  + 
Sbjct: 248  AVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADQGDDYTHLMDHGIQRDG 307

Query: 362  SKDEIEAQYEPFKRSFLQDINRHAAVVLEGRTVDVETGDTRSVAEALASSKRIELAKEAS 541
            + D +E Q + F+RS LQD+NRHAAVVLEGR++DVE+ DTR VAEAL   K++  A   +
Sbjct: 308  TMDVVEPQNDQFRRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTRVKQVSKADGET 367

Query: 542  DGNVHQERLDRIYRMAEIEDLQAPRDPPVAPLCIKDPRDYFDSQQVNALKVMGDQLAGTR 721
              + + ERL+R+ R+A +EDLQAP++ P+APL IKDPRDYF+SQQ N L V      G +
Sbjct: 368  TKDANLERLERMSRLAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVLNVP----RGAK 423

Query: 722  HMKSRLSISEAYGSLRVFISEIRNVGLSEPIVKPEVAVKVFNGLTQNISSSKYQLGKNPH 901
             +K   ++ EAYG L+  I EIR  GLS+P+++PEV+ +VF+ LT+ IS++K  +GKNP 
Sbjct: 424  GLKR--NVHEAYGLLKESILEIRATGLSDPLIRPEVSFEVFSSLTRTISTAKNIIGKNPR 481

Query: 902  ESILDTLPSVTKEELL 949
            ES LD LP  TK+E+L
Sbjct: 482  ESFLDRLPKSTKDEVL 497


>ref|NP_175971.3| transcription initiation factor TFIIH subunit H1 [Arabidopsis
            thaliana] gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
            Full=Probable RNA polymerase II transcription factor B
            subunit 1-1; AltName: Full=General transcription and DNA
            repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
            Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332195172|gb|AEE33293.1| transcription initiation
            factor TFIIH subunit H1 [Arabidopsis thaliana]
          Length = 591

 Score =  355 bits (912), Expect = 7e-96
 Identities = 183/316 (57%), Positives = 236/316 (74%)
 Frame = +2

Query: 2    SDGQSNRVTFNLTPEMIHQIFAEKPAVRQAYLNFVPNKMTEKDFWTKYWRAQYLHSTKNI 181
            +DG++NRVTFNLTPE+I QIFAEKPAVRQA++N+VP+KMTEKDFWTKY+RA+YL+STKN 
Sbjct: 188  TDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEYLYSTKNT 247

Query: 182  VXXXXXXXXXXXXXVFLKQDAILASETRQKIRKVDPTLDMEADEGDDYTHIPGHGLAIES 361
                          VFLK D ILA ETR KIR+VDPTLDMEAD+GDDYTH+  HG+  + 
Sbjct: 248  AVAAAEAAEDEELAVFLKPDEILARETRHKIRRVDPTLDMEADQGDDYTHLMDHGIQRDG 307

Query: 362  SKDEIEAQYEPFKRSFLQDINRHAAVVLEGRTVDVETGDTRSVAEALASSKRIELAKEAS 541
            + D +E Q + FKRS LQD+NRHAAVVLEGR++DVE+ DTR VAEAL   K++  A   +
Sbjct: 308  TMDVVEPQNDQFKRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTRVKQVSKADGET 367

Query: 542  DGNVHQERLDRIYRMAEIEDLQAPRDPPVAPLCIKDPRDYFDSQQVNALKVMGDQLAGTR 721
              + +QERL+R+ R+A +EDLQAP++ P+APL IKDPRDYF+SQQ N L V      G +
Sbjct: 368  TKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVLNVP----RGAK 423

Query: 722  HMKSRLSISEAYGSLRVFISEIRNVGLSEPIVKPEVAVKVFNGLTQNISSSKYQLGKNPH 901
             +K   ++ EAYG L+  I EIR  GLS+P++KPEV+ +VF+ LT+ I+++K   GKNP 
Sbjct: 424  GLKR--NVHEAYGLLKESILEIRATGLSDPLIKPEVSFEVFSSLTRTIATAKNINGKNPR 481

Query: 902  ESILDTLPSVTKEELL 949
            ES LD LP  TK+E+L
Sbjct: 482  ESFLDRLPKSTKDEVL 497