BLASTX nr result

ID: Atractylodes22_contig00009080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009080
         (1152 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22720.3| unnamed protein product [Vitis vinifera]              333   5e-89
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...   326   8e-87
ref|XP_003535613.1| PREDICTED: DNA-directed RNA polymerase III s...   289   1e-75
ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III s...   283   6e-74
emb|CBI26210.3| unnamed protein product [Vitis vinifera]              276   5e-72

>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  333 bits (854), Expect = 5e-89
 Identities = 182/319 (57%), Positives = 235/319 (73%), Gaps = 1/319 (0%)
 Frame = -1

Query: 1146 RFLVEVDTWSNGALDDNSKTNPTTEIVGEKRKQDCLEPKTEVWATNKNKEILWRVNFEEF 967
            RF V ++T ++  +DD+          GEKRKQD LE   E  A+ + K++LWR NFEEF
Sbjct: 215  RFSVIINTGTD--VDDSPNVT-----AGEKRKQDALELDKETGASCE-KDVLWRANFEEF 266

Query: 966  VRRLRHKSCVSHVTTRLDSVSGIILSAIFEASRREETKVKMEKTVPLPMDTIFEEAMKSE 787
            VR LRHK+C+++V TRLD  + I+LSA+ EA+R EE KVK E +VPL MDTIFE  MKSE
Sbjct: 267  VRCLRHKACIANVKTRLDDGAAIVLSAMLEATRSEEKKVKTENSVPLSMDTIFEGVMKSE 326

Query: 786  EGRSLTLERVRASLVQLGCELPTIGIDETYSVDLKKIIDQAQTQEVESIVLKKYGREAYR 607
             GRS+TLERVR SL+QLGC     G  E+YSVDLK II+ AQ  EVESI LK+YGR+AYR
Sbjct: 327  AGRSMTLERVRGSLIQLGCAPCVRGAAESYSVDLKNIIELAQNDEVESITLKRYGRDAYR 386

Query: 606  MFRLLSERERLYETDKISNTTFVEKKDVLKILFQLWKDNFLHMERLGSEG-QKSEILLWK 430
            +FRLLS+  RL ETDKIS+TTFVEKKD  KIL+QLWKD +L ME+L   G ++S+ LLWK
Sbjct: 387  IFRLLSKSCRLLETDKISDTTFVEKKDTAKILYQLWKDEYLQMEKLNLHGSRQSQFLLWK 446

Query: 429  LNKRSLWEQTLDDMYHAALNLKLRLAHELEQENEILRELKGKTLGDEVKQKHKRVRDKWM 250
            + K +LW   L++MYH+ALNL LR+A+ELEQE EI++  + K +G  +  + +R+R   +
Sbjct: 447  VTKDTLWGHVLNEMYHSALNLSLRVAYELEQEQEIIQLPREKRVG-ALGNRFERLRKVRI 505

Query: 249  VLEASLMILDDGIMLFHDF 193
            +LE+SLM LDD IMLF+DF
Sbjct: 506  LLESSLMKLDDAIMLFNDF 524


>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
            vinifera]
          Length = 511

 Score =  326 bits (835), Expect = 8e-87
 Identities = 173/289 (59%), Positives = 220/289 (76%), Gaps = 1/289 (0%)
 Frame = -1

Query: 1056 RKQDCLEPKTEVWATNKNKEILWRVNFEEFVRRLRHKSCVSHVTTRLDSVSGIILSAIFE 877
            RKQD LE   E  A+ + K++LWR NFEEFVR LRHK+C+++V TRLD  + I+LSA+ E
Sbjct: 225  RKQDALELDKETGASCE-KDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAMLE 283

Query: 876  ASRREETKVKMEKTVPLPMDTIFEEAMKSEEGRSLTLERVRASLVQLGCELPTIGIDETY 697
            A+R EE KVK E +VPL MDTIFE  MKSE GRS+TLERVR SL+QLGC     G  E+Y
Sbjct: 284  ATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAAESY 343

Query: 696  SVDLKKIIDQAQTQEVESIVLKKYGREAYRMFRLLSERERLYETDKISNTTFVEKKDVLK 517
            SVDLK II+ AQ  EVESI LK+YGR+AYR+FRLLS+  RL ETDKIS+TTFVEKKD  K
Sbjct: 344  SVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTTFVEKKDTAK 403

Query: 516  ILFQLWKDNFLHMERLGSEG-QKSEILLWKLNKRSLWEQTLDDMYHAALNLKLRLAHELE 340
            IL+QLWKD +L ME+L   G ++S+ LLWK+ K +LW   L++MYH+ALNL LR+A+ELE
Sbjct: 404  ILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAYELE 463

Query: 339  QENEILRELKGKTLGDEVKQKHKRVRDKWMVLEASLMILDDGIMLFHDF 193
            QE EI++  + K +G  +  + +R+R   ++LE+SLM LDD IMLF+DF
Sbjct: 464  QEQEIIQLPREKRVG-ALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 511


>ref|XP_003535613.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Glycine
            max]
          Length = 510

 Score =  289 bits (739), Expect = 1e-75
 Identities = 141/275 (51%), Positives = 210/275 (76%), Gaps = 3/275 (1%)
 Frame = -1

Query: 1008 KNKEILWRVNFEEFVRRLRHKSCVSHVTTRLDSVSGIILSAIFEASRREETKVKMEKTVP 829
            K  +ILWR NFEEF+R LRHK  + +V T+ D  +  +LSA+ EA+R  + KVK E +VP
Sbjct: 237  KEGQILWRANFEEFIRHLRHKVLIENVRTQHDDGTATVLSAVLEATRSVQKKVKTENSVP 296

Query: 828  LPMDTIFEEAMKSEEGRSLTLERVRASLVQLGCELPTIGIDETYSVDLKKIIDQAQTQEV 649
            L +DTI  E MK++ GR++T++R+RASLVQLGC  P++ ++E+YS+DLKKII+ A+ +EV
Sbjct: 297  LSLDTIITEVMKTDTGRTMTVDRIRASLVQLGCS-PSMILEESYSIDLKKIIEPARNEEV 355

Query: 648  ESIVLKKYGREAYRMFRLLSERERLYETDKISNTTFVEKKDVLKILFQLWKDNFLHMERL 469
            ESIVLK+YG + YR+FRLL++    ++TD+I+ +T VEKK+  K+L++LWKDN+L+ME++
Sbjct: 356  ESIVLKRYGTDGYRIFRLLAKDCCFHDTDQIAASTLVEKKEASKLLYKLWKDNYLYMEKV 415

Query: 468  GSE--GQKSEILLWKLNKRSLWEQTLDDMYHAALNLKLRLAHELEQENEILRELKGKTLG 295
            G+    +++ IL+WK+NK  LWE  LD+MYHAALNL LR+A E E++ E+L+  K K  G
Sbjct: 416  GATVGAKQTTILMWKVNKPLLWEYVLDEMYHAALNLSLRMAFEQEKDEELLKVPKDKRQG 475

Query: 294  -DEVKQKHKRVRDKWMVLEASLMILDDGIMLFHDF 193
               +++K+K++ + W++L +SLM LDD +MLFHDF
Sbjct: 476  PGPLQKKYKKLLNVWLLLGSSLMKLDDALMLFHDF 510


>ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Glycine
            max]
          Length = 518

 Score =  283 bits (724), Expect = 6e-74
 Identities = 140/275 (50%), Positives = 209/275 (76%), Gaps = 3/275 (1%)
 Frame = -1

Query: 1008 KNKEILWRVNFEEFVRRLRHKSCVSHVTTRLDSVSGIILSAIFEASRREETKVKMEKTVP 829
            K ++ILWR NFEEF+R LRHK  + +V T+ D  +  +LSA+ EA+   E KVKM+ +VP
Sbjct: 245  KEEQILWRANFEEFIRHLRHKVLIENVRTQHDDGTATVLSAVLEATGSVEKKVKMDNSVP 304

Query: 828  LPMDTIFEEAMKSEEGRSLTLERVRASLVQLGCELPTIGIDETYSVDLKKIIDQAQTQEV 649
            L +DTI  E MK++ GR++T++R+RASLVQLGC  P++ ++E+Y +DLKKII+ A+ +EV
Sbjct: 305  LSLDTIITEVMKTDTGRTMTIDRIRASLVQLGCS-PSMILEESYCIDLKKIIEPARNEEV 363

Query: 648  ESIVLKKYGREAYRMFRLLSERERLYETDKISNTTFVEKKDVLKILFQLWKDNFLHMERL 469
            ESIVLK+YGR+AYRMFRLL++    ++TD+I+ +T VEKK+  K+L++LWKDN+L+ME++
Sbjct: 364  ESIVLKRYGRDAYRMFRLLAKDCCFHDTDQIAASTLVEKKEASKLLYKLWKDNYLYMEKV 423

Query: 468  GSE--GQKSEILLWKLNKRSLWEQTLDDMYHAALNLKLRLAHELEQENEILRELKGKTL- 298
            G+    ++  IL+WK+NK  LWE  LD+MYHAALNL LR+A E E++ E+L+  K K   
Sbjct: 424  GATAGAKQITILMWKVNKPLLWEYVLDEMYHAALNLSLRMAFEQEKDEELLKVPKDKLRE 483

Query: 297  GDEVKQKHKRVRDKWMVLEASLMILDDGIMLFHDF 193
               +++K+KR+ +  +++ +SL+ LDD +MLFHDF
Sbjct: 484  PGPLQKKYKRLLNVRLLMGSSLLKLDDALMLFHDF 518


>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  276 bits (707), Expect = 5e-72
 Identities = 149/304 (49%), Positives = 211/304 (69%), Gaps = 1/304 (0%)
 Frame = -1

Query: 1101 DNSKTNPTTEIVGEKRKQDCLEPKTEVWATNKNKEILWRVNFEEFVRRLRHKSCVSHVTT 922
            D S  NP   ++G+KRKQD L+  TE  A ++ K++ WR N++E V  LRHK+C+ +V  
Sbjct: 229  DKSIGNPPGVVIGKKRKQDALKLDTESGAASE-KDVPWRANYKELVCHLRHKACIENVRA 287

Query: 921  RLDSVSGIILSAIFEASRREETKVKMEKTVPLPMDTIFEEAMKSEEGRSLTLERVRASLV 742
            RLDS + I+LSA+ EA++  E  VK E +V L + TI E  M+SE G S+TLER+RASLV
Sbjct: 288  RLDSGAAIVLSAMLEATQSAEKNVKEEISVLLSISTITEAVMQSEAGCSMTLERIRASLV 347

Query: 741  QLGCELPTIGIDETYSVDLKKIIDQAQTQEVESIVLKKYGREAYRMFRLLSERERLYETD 562
            QLGC    +G D TY++DLKKII+ AQ  EVES+VLK+YGREA+R+FRLLS+     ET 
Sbjct: 348  QLGCHPNGVGADRTYNIDLKKIIELAQNDEVESMVLKRYGREAHRIFRLLSKSCCPLETT 407

Query: 561  KISNTTFVEKKDVLKILFQLWKDNFLHMERLG-SEGQKSEILLWKLNKRSLWEQTLDDMY 385
            KIS+TTF+EKK+  KIL++LWKD  LHME++  +E ++S+ +LWK+ K + W   LD+MY
Sbjct: 408  KISDTTFIEKKEAAKILYKLWKDECLHMEKIVLNESRQSQFMLWKVKKDTFWRHILDEMY 467

Query: 384  HAALNLKLRLAHELEQENEILRELKGKTLGDEVKQKHKRVRDKWMVLEASLMILDDGIML 205
            HAALNL +++  EL ++  +            ++++  R+    ++L+ASLM LDD +ML
Sbjct: 468  HAALNLSIQII-ELRRDKHV----------GALRERDVRLA---ILLQASLMKLDDALML 513

Query: 204  FHDF 193
            FHDF
Sbjct: 514  FHDF 517