BLASTX nr result

ID: Atractylodes22_contig00009073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009073
         (1255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containi...   392   e-107
ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containi...   390   e-106
gb|AFK46902.1| unknown [Medicago truncatula]                          383   e-104
ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containi...   383   e-104
ref|XP_002529057.1| multidrug resistance pump, putative [Ricinus...   366   6e-99

>ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Glycine max]
          Length = 530

 Score =  392 bits (1008), Expect = e-107
 Identities = 218/408 (53%), Positives = 261/408 (63%), Gaps = 2/408 (0%)
 Frame = -3

Query: 1253 EPEIAALLKVSADVGNEDKVYEYLHKLRMGVRCVSESTAEIIENWFNGEMGAEVGSGLED 1074
            E E+AALLKVSA  G  DKVYEYLHKLR  VRCVSES+A +IE WF G   +EVG    +
Sbjct: 167  EAEVAALLKVSARCGRADKVYEYLHKLRSSVRCVSESSAVVIEEWFRGSKSSEVGE--VE 224

Query: 1073 WDMGRVKDVILRNXXXXXXXXXXXXXXWMVQRTTVXXXXXXXXCKEQLACVDIGREETEK 894
            ++ G+VK+ +LRN              W+V RT+V        C EQL CVDI   E EK
Sbjct: 225  FEAGQVKEGVLRNGGGWHGQGWVGKGDWVVSRTSVGADGHCCCCGEQLVCVDIDDAEREK 284

Query: 893  FAQSVVALANEREKRTNFTQFQNWLDQHNDFEAIVDGANIGLYQQNFAEGGFSVSQLEVV 714
            FA SV ALA ERE + NF++FQ WL++H  +EAIVDGANIGLYQQNFA+GGFS+SQL+ V
Sbjct: 285  FAGSVAALAFEREVKANFSEFQAWLEKHASYEAIVDGANIGLYQQNFADGGFSISQLDDV 344

Query: 713  INELYNRS-KKWPLVILHDKRIRALLADPSNRGLLEEWIERGFLYGTPIGSNDDWYWLYA 537
            + ELYNRS KKWPLV+LH+KR+R L+ +PS+R L+EEW+  G LY TP GSNDDWYWL+A
Sbjct: 345  VKELYNRSGKKWPLVVLHNKRLRGLMENPSSRRLVEEWMNNGALYTTPNGSNDDWYWLFA 404

Query: 536  FVKLKCMIVTNDEMRDHMFELLGRSFFPMWKERHQVHYTFSKGKLKLQMPPSYSLVIQES 357
             VKL+C++VTNDEMRDH+FEL+G +FF  WKERHQVHYTF KG LKLQMPPSYSLVIQES
Sbjct: 405  AVKLRCLLVTNDEMRDHIFELIGSNFFNQWKERHQVHYTFVKGNLKLQMPPSYSLVIQES 464

Query: 356  ERGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDESLRTWLCITRPGLSK 177
            E+G                                         ES R WLCITRP    
Sbjct: 465  EKGYWHVPLAPGTSC-----------------------------ESTRCWLCITRP---C 492

Query: 176  ASDVVSKSTEDSETRKLINGIHD-GSNASHNSETKAQLGITGKRKERS 36
              DVV+          + NG+    S    N+ T     +TGKRKERS
Sbjct: 493  GHDVVA---------TVSNGVSSLDSQVDENNAT----SVTGKRKERS 527


>ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Glycine max]
          Length = 550

 Score =  390 bits (1003), Expect = e-106
 Identities = 206/375 (54%), Positives = 248/375 (66%), Gaps = 1/375 (0%)
 Frame = -3

Query: 1253 EPEIAALLKVSADVGNEDKVYEYLHKLRMGVRCVSESTAEIIENWFNGEMGAEVGSGLED 1074
            E E+AALLKVSA  G  DKVYEYLH+LR  VRCVSESTA +IE WF G   +EVG    +
Sbjct: 166  EAELAALLKVSARCGRVDKVYEYLHRLRSSVRCVSESTAVVIEEWFRGSKASEVGEA--E 223

Query: 1073 WDMGRVKDVILRNXXXXXXXXXXXXXXWMVQRTTVXXXXXXXXCKEQLACVDIGREETEK 894
            +D GRVK+ +LRN              W+V RT+V        C +QL CVDI   ETEK
Sbjct: 224  FDAGRVKEGVLRNGGGWHGQGWVGKGDWVVSRTSVVADGHCCCCGQQLVCVDIDDVETEK 283

Query: 893  FAQSVVALANEREKRTNFTQFQNWLDQHNDFEAIVDGANIGLYQQNFAEGGFSVSQLEVV 714
            FA SV ALA ERE + NF++FQ WL++H  +EAIVDGANIGLYQQNFA+GGF++SQL+ V
Sbjct: 284  FAGSVAALAFEREVKANFSEFQAWLEKHASYEAIVDGANIGLYQQNFADGGFNISQLDDV 343

Query: 713  INELYNRS-KKWPLVILHDKRIRALLADPSNRGLLEEWIERGFLYGTPIGSNDDWYWLYA 537
            + ELYNRS KKWPLV+LH+KR+R L+ +PS+R L+EEW++ G LY TP GSNDDWYWL+A
Sbjct: 344  VKELYNRSGKKWPLVVLHNKRLRGLMENPSSRRLVEEWMKNGVLYTTPNGSNDDWYWLFA 403

Query: 536  FVKLKCMIVTNDEMRDHMFELLGRSFFPMWKERHQVHYTFSKGKLKLQMPPSYSLVIQES 357
             VKL+C++VTNDEMRDH+FEL+G +FF  WKERHQVHYTF KG LKLQMPPSYSLVIQES
Sbjct: 404  AVKLRCLLVTNDEMRDHIFELIGSNFFNQWKERHQVHYTFVKGNLKLQMPPSYSLVIQES 463

Query: 356  ERGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDESLRTWLCITRPGLSK 177
            E+G                                         ES R WLCITRP    
Sbjct: 464  EKGYWHVPLVSGTSC-----------------------------ESTRCWLCITRPSGHD 494

Query: 176  ASDVVSKSTEDSETR 132
            A   VS      +++
Sbjct: 495  AVATVSNGVSSLDSQ 509


>gb|AFK46902.1| unknown [Medicago truncatula]
          Length = 392

 Score =  383 bits (984), Expect = e-104
 Identities = 212/415 (51%), Positives = 262/415 (63%), Gaps = 9/415 (2%)
 Frame = -3

Query: 1253 EPEIAALLKVSADVGNEDKVYEYLHKLRMGVRCVSESTAEIIENWFNGEMGAEVGSGLED 1074
            E EIAALLKVSA  G  D+VY YLHKLR GV CV ESTA +IE WF      EVG G  D
Sbjct: 10   EAEIAALLKVSAKKGRADRVYMYLHKLRSGVTCVEESTATVIEEWFQSSEAREVGEG--D 67

Query: 1073 WDMGRVKDVILRNXXXXXXXXXXXXXXWMVQRTTVXXXXXXXXCKEQLACVDIGREETEK 894
             D+ RV++ +LRN              W+V R +V        C EQL CVDI  EE EK
Sbjct: 68   LDVTRVREAVLRNGGGWHGLGWVGKGDWVVSRMSVDDDGICCGCGEQLVCVDIDDEEMEK 127

Query: 893  FAQSVVALANEREKRTNFTQFQNWLDQHNDFEAIVDGANIGLYQQNFAEGGFSVSQLEVV 714
            FA SV ALA ERE + NF++FQ WL++H  +EAIVDGAN+GLYQQNFA+GGFS +QL+ V
Sbjct: 128  FASSVAALAVEREVKANFSEFQGWLEKHGCYEAIVDGANVGLYQQNFADGGFSTNQLDDV 187

Query: 713  INELYNRS-KKWPLVILHDKRIRALLADPSNRGLLEEWIERGFLYGTPIGSNDDWYWLYA 537
            + ELYN+S +KWPLV+LH+KR++ L+ +PS+R L+EEW++ G LY TP GSNDDWYWLYA
Sbjct: 188  VKELYNQSGRKWPLVVLHNKRVKGLMENPSSRKLVEEWMKNGVLYTTPNGSNDDWYWLYA 247

Query: 536  FVKLKCMIVTNDEMRDHMFELLGRSFFPMWKERHQVHYTFSKGKLKLQMPPSYSLVIQES 357
             VKL+C++VTNDEMRDH+FELLG +FF  WKERHQVHYTF KG LKLQMPP YSLVIQES
Sbjct: 248  TVKLRCLLVTNDEMRDHIFELLGSNFFNQWKERHQVHYTFVKGNLKLQMPPPYSLVIQES 307

Query: 356  ERGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDESLRTWLCITRPG--- 186
            E+G+                                       +ES + WLCITR     
Sbjct: 308  EKGS-----------------------------WHVPLAVDTSNESSKPWLCITRASADD 338

Query: 185  LSKASDVVSKSTED----SETRKLINGIHD-GSNASHNSETKAQLGITGKRKERS 36
             + AS+ V  S  +     + +K+ + +    S    N+ T     +TGKRKERS
Sbjct: 339  ATTASNGVDTSGNNHIHIDQPQKIADEVLSLDSQVIENNST----SVTGKRKERS 389


>ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Vitis vinifera]
          Length = 551

 Score =  383 bits (983), Expect = e-104
 Identities = 221/419 (52%), Positives = 263/419 (62%), Gaps = 9/419 (2%)
 Frame = -3

Query: 1253 EPEIAALLKVSADVGNEDKVYEYLHKLRMGVRCVSESTAEIIENWFNGEMGAEVGSGLED 1074
            EPE+AALLKVSA++G  DKVY YLHKLR  VR VSESTAEIIE WF GE  +EVG    D
Sbjct: 160  EPELAALLKVSAEMGRGDKVYAYLHKLRTAVRSVSESTAEIIEGWFCGEAASEVGG--VD 217

Query: 1073 WDMGRVKDVILRNXXXXXXXXXXXXXXWMVQRTTVXXXXXXXXCKEQLACVDIGREETEK 894
              +G +++V L+N              W+V R  V        C+EQLA VDI R ETE 
Sbjct: 218  CCLGAIEEVALKNGGGWHGQGWIGKGKWLVCRAKVDSSGQCGSCREQLATVDIDRAETET 277

Query: 893  FAQSVVALANEREKRTNFTQFQNWLDQHNDFEAIVDGANIGLYQQNFAEGGFSVSQLEVV 714
            F +SV A+A ERE R+NF +FQ+WLD+H D+EAIVDGANIGLYQQNFA G FS+ QL+ V
Sbjct: 278  FLESVAAMAMEREVRSNFREFQDWLDKHADYEAIVDGANIGLYQQNFANGEFSIPQLDAV 337

Query: 713  INELYNRS-KKWPLVILHDKRIRALLADPSNRGLLEEWIERGFLYGTPIGSNDDWYWLYA 537
            + ELY+RS KK PLVILH+KR R L  + SNR LL+EW+ +G LY TP GSNDDWYWLYA
Sbjct: 338  VKELYDRSQKKRPLVILHNKRFRKLSENASNRKLLQEWLTQGVLYTTPNGSNDDWYWLYA 397

Query: 536  FVKLKCMIVTNDEMRDHMFELLGRSFFPMWKERHQVHYTFSKGKLKLQMPPSYSLVIQES 357
             VKLKC++VTNDEMRDH+FELLG SFF  WKERHQV YTF KG +KL MPPSYSL IQES
Sbjct: 398  AVKLKCLLVTNDEMRDHIFELLGSSFFLKWKERHQVRYTFVKGNVKLLMPPSYSLFIQES 457

Query: 356  ERGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDESLRTWLCITRPGLSK 177
             +G                                        DESLRTW CITRP   +
Sbjct: 458  VKGT-----------------------------WHVPVASESSDESLRTWHCITRPSSHE 488

Query: 176  ASDVVSKSTEDSETR-------KLINGIHDG-SNASHNSETKAQLGITGKRKERSASPT 24
             +   S + E  E         KL +   +G  N S  ++T     +TGKRK+RS SP+
Sbjct: 489  LNGKASVNLETCEIDRQEQCDFKLSSCKSEGLRNGSCENKTTT---MTGKRKDRSPSPS 544


>ref|XP_002529057.1| multidrug resistance pump, putative [Ricinus communis]
            gi|223531469|gb|EEF33301.1| multidrug resistance pump,
            putative [Ricinus communis]
          Length = 561

 Score =  366 bits (940), Expect = 6e-99
 Identities = 205/425 (48%), Positives = 262/425 (61%), Gaps = 15/425 (3%)
 Frame = -3

Query: 1253 EPEIAALLKVSADVGNEDKVYEYLHKLRMGVRCVSESTAEIIENWFNGEMGAEVGSGLED 1074
            E EIAALLKVS +  N+++VY YL KLR  VRCV E TA+I+E+WF      EV    ++
Sbjct: 172  ELEIAALLKVSVETKNKERVYGYLQKLRKTVRCVKEETAKIVEDWFKD---FEVNG--KE 226

Query: 1073 WDMGRVKDVILRNXXXXXXXXXXXXXXWMVQRTTVXXXXXXXXCKEQLACVDIGREETEK 894
             D+G V+  +++N              W V+R  +        C E LACVDI   ETE+
Sbjct: 227  LDVGLVRKAVVKNGGGWHGLGWIEKGKWGVKRGNMDMDGRCCCCGESLACVDIDDLETER 286

Query: 893  FAQSVVALANEREKRTNFTQFQNWLDQHNDFEAIVDGANIGLYQQNFAEGGFSVSQLEVV 714
            FA S+  LA ERE + NF++FQ+WLD++ D++AIVDGAN+GLYQQNFAEGGFS+SQL+ V
Sbjct: 287  FAGSLAGLAMEREVKANFSEFQDWLDKNADYDAIVDGANVGLYQQNFAEGGFSISQLDAV 346

Query: 713  INELYNRSKKWPLVILHDKRIRALLADPSNRGLLEEWIERGFLYGTPIGSNDDWYWLYAF 534
            + ELY+RS KWPL++LH+KR+RA+L +PS R L++EW E+  LY TP GSNDDWYWLYA 
Sbjct: 347  VKELYDRSGKWPLIVLHNKRVRAILENPSQRNLIQEWTEKDILYTTPHGSNDDWYWLYAA 406

Query: 533  VKLKCMIVTNDEMRDHMFELLGRSFFPMWKERHQVHYTFSKGKLKLQMPPSYSLVIQESE 354
            VKLKC++VTNDEMRDH+FELLG SFF  WKERHQV YTF KGKLKLQMPP +S++IQESE
Sbjct: 407  VKLKCLLVTNDEMRDHIFELLGSSFFLKWKERHQVRYTFVKGKLKLQMPPPFSVLIQESE 466

Query: 353  RGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDESLRTWLCITRPGLSKA 174
            +G+                                       ++S ++WLCITR     A
Sbjct: 467  KGS-----------------------------WHVPIAGDGNEDSAQSWLCITRSSACYA 497

Query: 173  SDVVSKSTEDSET----RKLI-----------NGIHDGSNASHNSETKAQLGITGKRKER 39
             D    + E  ET    R L+           N I D   +  +SE K     TGKRK R
Sbjct: 498  PDKDEMNIETFETEYQDRILLSPSKANSITGYNDILDSEESFPHSENKPATP-TGKRKGR 556

Query: 38   SASPT 24
            S SP+
Sbjct: 557  STSPS 561


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