BLASTX nr result

ID: Atractylodes22_contig00009069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00009069
         (1318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]   447   e-123
ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-...   445   e-122
ref|XP_003541362.1| PREDICTED: DNA repair and recombination prot...   437   e-120
ref|XP_002307656.1| chromatin remodeling complex subunit [Populu...   429   e-118
ref|XP_002529848.1| DNA repair and recombination protein RAD26, ...   426   e-117

>emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]
          Length = 1249

 Score =  447 bits (1151), Expect = e-123
 Identities = 235/390 (60%), Positives = 287/390 (73%), Gaps = 15/390 (3%)
 Frame = -3

Query: 1316 STDMQARERAWRIGQTKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKA 1137
            STDMQARERAWRIGQT+DVTVYRLITRGTIEEKVY RQIYKHFLTNKILKNPQQKRFFKA
Sbjct: 863  STDMQARERAWRIGQTRDVTVYRLITRGTIEEKVYQRQIYKHFLTNKILKNPQQKRFFKA 922

Query: 1136 RDMKDLFTLNDDRENGSTETSNLFGQLSEDVNVVAPHVNNQD-------IQGLSREAIIK 978
            RDMKDLF LNDD E+ STETSN+F QLSEDVNVV  H +NQD       +   +  A+ +
Sbjct: 923  RDMKDLFVLNDDGEDASTETSNIFSQLSEDVNVVGKHKDNQDKQKSIIPVSSHACGAVDE 982

Query: 977  DENTATGTRKTSXXXXXXKIDDSNGGGSEETNILRSLFDAQGIHSAVNHDLIMNAHDEEK 798
              N+  G+ ++         DD +    +ETNILRSLFDA  +HSAVNHD IMNAH +EK
Sbjct: 983  GNNSTIGSSRSGENEK----DDQSDEMDKETNILRSLFDAHRLHSAVNHDAIMNAHGDEK 1038

Query: 797  VKLDEQASQVAHRAAEALRQSRMIRSQESIAVPTWTGKSGTAGAPGSSVRKFGSTVNSKL 618
            ++L+E+AS+VA RA+EALRQS+M+RS+ESI+VPTWTG+SG AGAP S  RKFGSTV+S+L
Sbjct: 1039 MRLEEEASRVAKRASEALRQSQMLRSRESISVPTWTGRSGAAGAPSSVSRKFGSTVSSQL 1098

Query: 617  ISKTRTEEGSSNSEGTRQNNFVXXXXXXXXXXXXXXXXKIRGTQEQAVGDALEHQL---- 450
            I+++++ E SS++  ++ N                   +IRG QE+A  D LEHQL    
Sbjct: 1099 INRSKSSEESSSNGMSKPNGIAAGASAGKALSSAELLARIRGNQERATDDGLEHQLGSSS 1158

Query: 449  ----XXXXXXXXXXXXSHNLGGAPPEVLIRQICTFIQQRGGSCDSASIVQHFRDRIPSKD 282
                            +HNL    PEVLIR+ICTFIQQ+GGS +S SIVQHF+DRIPSKD
Sbjct: 1159 ANRARSTDSGPSSSRSTHNLSSVQPEVLIRKICTFIQQKGGSTNSTSIVQHFKDRIPSKD 1218

Query: 281  LPVFKSLLKEIATLQRNPNGSSWILKPEYQ 192
            LP+FK+LLKEIATL+++PNGSSW+LKPEY+
Sbjct: 1219 LPLFKNLLKEIATLEKDPNGSSWVLKPEYR 1248


>ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
          Length = 1227

 Score =  445 bits (1144), Expect = e-122
 Identities = 234/390 (60%), Positives = 286/390 (73%), Gaps = 15/390 (3%)
 Frame = -3

Query: 1316 STDMQARERAWRIGQTKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKA 1137
            STDMQARERAWRIGQT+DVTVYRLITRGTIEEKVY RQIYKHFLTNKILKNPQQKRFFKA
Sbjct: 841  STDMQARERAWRIGQTRDVTVYRLITRGTIEEKVYQRQIYKHFLTNKILKNPQQKRFFKA 900

Query: 1136 RDMKDLFTLNDDRENGSTETSNLFGQLSEDVNVVAPHVNNQD-------IQGLSREAIIK 978
            RDMKDLF LNDD E+ STETSN+F QLSEDVNVV  H ++QD       +   +  A+ +
Sbjct: 901  RDMKDLFVLNDDGEDASTETSNIFSQLSEDVNVVGKHKDSQDKQKSIIPVSSHACGAVDE 960

Query: 977  DENTATGTRKTSXXXXXXKIDDSNGGGSEETNILRSLFDAQGIHSAVNHDLIMNAHDEEK 798
              N+  G  ++         DD +    +ETNILRSLFDA  +HSAVNHD IMNAH +EK
Sbjct: 961  GNNSTIGPSRSGENEK----DDQSDEMDKETNILRSLFDAHRLHSAVNHDAIMNAHGDEK 1016

Query: 797  VKLDEQASQVAHRAAEALRQSRMIRSQESIAVPTWTGKSGTAGAPGSSVRKFGSTVNSKL 618
            ++L+E+AS+VA RA+EALRQS+M+RS+ESI+VPTWTG+SG AGAP S  RKFGSTV+S+L
Sbjct: 1017 MRLEEEASRVAKRASEALRQSQMLRSRESISVPTWTGRSGAAGAPSSVSRKFGSTVSSQL 1076

Query: 617  ISKTRTEEGSSNSEGTRQNNFVXXXXXXXXXXXXXXXXKIRGTQEQAVGDALEHQL---- 450
            I+++++ E SS++  ++ N                   +IRG QE+A  D LEHQL    
Sbjct: 1077 INRSKSSEESSSNGMSKPNGIAAGASAGKALSSAELLARIRGNQERATDDGLEHQLGSSS 1136

Query: 449  ----XXXXXXXXXXXXSHNLGGAPPEVLIRQICTFIQQRGGSCDSASIVQHFRDRIPSKD 282
                            +HNL    PEVLIR+ICTFIQQ+GGS +S SIVQHF+DRIPSKD
Sbjct: 1137 ANRARSTDSGPSSSRSTHNLSSVQPEVLIRKICTFIQQKGGSTNSTSIVQHFKDRIPSKD 1196

Query: 281  LPVFKSLLKEIATLQRNPNGSSWILKPEYQ 192
            LP+FK+LLKEIATL+++PNGSSW+LKPEY+
Sbjct: 1197 LPLFKNLLKEIATLEKDPNGSSWVLKPEYR 1226


>ref|XP_003541362.1| PREDICTED: DNA repair and recombination protein RAD26-like [Glycine
            max]
          Length = 1210

 Score =  437 bits (1124), Expect = e-120
 Identities = 233/383 (60%), Positives = 272/383 (71%), Gaps = 8/383 (2%)
 Frame = -3

Query: 1316 STDMQARERAWRIGQTKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKA 1137
            STDMQARERAWRIGQ +DVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKA
Sbjct: 836  STDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKA 895

Query: 1136 RDMKDLFTLNDDRENGSTETSNLFGQLSEDVNVVAPHVNNQDIQGLSREAIIKDENTATG 957
            RDMKDLFTLN D E GSTETSN+F Q+SE+VNV+  +  N+D    S+ A +  E+ A G
Sbjct: 896  RDMKDLFTLNVDGETGSTETSNIFSQISEEVNVIGTYKENKDKYKHSQTAELVSEDVAVG 955

Query: 956  TRKTSXXXXXXKIDDSNGGGSEETNILRSLFDAQGIHSAVNHDLIMNAHDEEKVKLDEQA 777
                S         +   G  EETNIL+SLFDA GIHSA+NHDLIMNAHDEEK++L+EQA
Sbjct: 956  NDDKS---------ERGNGVGEETNILKSLFDANGIHSAMNHDLIMNAHDEEKIRLEEQA 1006

Query: 776  SQVAHRAAEALRQSRMIRSQESIAVPTWTGKSGTAGAPGSSVRKFGSTVNSKLISKTRTE 597
            SQVA RAAEALRQSRM+RS +S++VPTWTG+SGTAGAP S  RKFGSTVN +L++ ++  
Sbjct: 1007 SQVAQRAAEALRQSRMLRSHDSVSVPTWTGRSGTAGAPSSVKRKFGSTVNPQLVNNSKAS 1066

Query: 596  EGSSNSEGTRQNNF-VXXXXXXXXXXXXXXXXKIRGTQEQAVGDALEHQLXXXXXXXXXX 420
            +   N    + N F                  +IRG QE+A+G  LEHQ           
Sbjct: 1067 DELPNKGTNKINGFAAAGASAGKALSSAELLAQIRGNQEKAIGAGLEHQFGVSSSSTNQP 1126

Query: 419  XXSH-------NLGGAPPEVLIRQICTFIQQRGGSCDSASIVQHFRDRIPSKDLPVFKSL 261
                             PEVLIR+ICTFIQQRGGS DSASIVQ+F+DRIPSKDL +FK+L
Sbjct: 1127 RSGDVRSSRATENSSVQPEVLIRKICTFIQQRGGSSDSASIVQYFKDRIPSKDLALFKNL 1186

Query: 260  LKEIATLQRNPNGSSWILKPEYQ 192
            LKEIATL +  NGS W+LKP+YQ
Sbjct: 1187 LKEIATLHKGSNGSYWVLKPDYQ 1209


>ref|XP_002307656.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222857105|gb|EEE94652.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1206

 Score =  429 bits (1103), Expect = e-118
 Identities = 233/383 (60%), Positives = 272/383 (71%), Gaps = 8/383 (2%)
 Frame = -3

Query: 1316 STDMQARERAWRIGQTKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKA 1137
            STDMQARERAWRIGQ KDVTVYRLIT GTIEEKVYHRQIYKHFLTNKILKNPQQ+RFF+A
Sbjct: 839  STDMQARERAWRIGQKKDVTVYRLITGGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFRA 898

Query: 1136 RDMKDLFTLNDDRENGSTETSNLFGQLSEDVNVVAPHVNNQDIQGLSREAIIKDENTATG 957
            RDMKDLFTLNDD E GSTETSN+F QLSEDVNVV            +++  +K      G
Sbjct: 899  RDMKDLFTLNDDGEGGSTETSNIFSQLSEDVNVVG-----------TKKEKLKKRKKNKG 947

Query: 956  TRKTSXXXXXXKIDDSNGGGSEETNILRSLFDAQGIHSAVNHDLIMNAHDEEKVKLDEQA 777
              + +      K D S+G   EETNIL+SLFDA GIHSAVNHD+IMNAHD EK++L+EQA
Sbjct: 948  IAQHADDAIKEKADCSDGEVDEETNILKSLFDANGIHSAVNHDVIMNAHDGEKMRLEEQA 1007

Query: 776  SQVAHRAAEALRQSRMIRSQESIAVPTWTGKSGTAGAPGSSVRKFGSTVNSKLISKTRTE 597
            SQVA RAAEALRQSRM+RS++SI+VPTWTGKSGTAGAP S  +KFGSTVNS+LI  +   
Sbjct: 1008 SQVAQRAAEALRQSRMLRSRDSISVPTWTGKSGTAGAPSSVRQKFGSTVNSQLIKSS--- 1064

Query: 596  EGSSNSEGTRQNNFVXXXXXXXXXXXXXXXXKIRGTQEQAVGDALEHQLXXXXXXXXXXX 417
              SS+S  +                      +IRG QE+AVG  L+ Q            
Sbjct: 1065 -DSSSSNKSNLKGIAAGTSAGKALSSAELLARIRGNQERAVGAGLDQQFGFASSSGTSAM 1123

Query: 416  XSHN--------LGGAPPEVLIRQICTFIQQRGGSCDSASIVQHFRDRIPSKDLPVFKSL 261
              ++        L    PE+LIRQICTFIQ+RGGS DS+SIVQHF+DRIPSKDLP+FK+L
Sbjct: 1124 SENSGASKPPQTLSSVQPEILIRQICTFIQRRGGSSDSSSIVQHFKDRIPSKDLPLFKNL 1183

Query: 260  LKEIATLQRNPNGSSWILKPEYQ 192
            LKEIA+L+ + NG  W+LKPEYQ
Sbjct: 1184 LKEIASLREDANGKQWVLKPEYQ 1206


>ref|XP_002529848.1| DNA repair and recombination protein RAD26, putative [Ricinus
            communis] gi|223530676|gb|EEF32549.1| DNA repair and
            recombination protein RAD26, putative [Ricinus communis]
          Length = 1230

 Score =  426 bits (1096), Expect = e-117
 Identities = 235/390 (60%), Positives = 273/390 (70%), Gaps = 15/390 (3%)
 Frame = -3

Query: 1316 STDMQARERAWRIGQTKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKA 1137
            STDMQARERAWRIGQ +DVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQ+RFFKA
Sbjct: 843  STDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKA 902

Query: 1136 RDMKDLFTLNDDRENGSTETSNLFGQLSEDVNVVAPHVNNQDIQ-------GLSREAIIK 978
            RDMKDLFTLNDD  +G TETSN+F QLSE+VNVV      +D +         + +A + 
Sbjct: 903  RDMKDLFTLNDDGGSGLTETSNIFSQLSEEVNVVGAKKEKEDKKKHYKGSASHADDAALD 962

Query: 977  DENTATGTRKTSXXXXXXKIDDSNGGGSEETNILRSLFDAQGIHSAVNHDLIMNAHDEEK 798
             EN+              K + S+G   EETNILRSL DAQGIHSAVNHD IMNAHDEEK
Sbjct: 963  KENSPEIGPSHRKGKGKEKANHSDGEVDEETNILRSLIDAQGIHSAVNHDAIMNAHDEEK 1022

Query: 797  VKLDEQASQVAHRAAEALRQSRMIRSQESIAVPTWTGKSGTAGAPGSSVRKFGSTVNSKL 618
             +L+EQASQVA RAAEALRQSRM+RS +S++VPTWTGKSGTAGAP S  RKFGSTVNS+L
Sbjct: 1023 TRLEEQASQVAQRAAEALRQSRMLRSHDSVSVPTWTGKSGTAGAPSSVRRKFGSTVNSQL 1082

Query: 617  ISKTRTEEGSSNSEGTRQNNFVXXXXXXXXXXXXXXXXKIRGTQEQAVGDALEHQLXXXX 438
            I   R+ + SSN   +  N                   +IRG QE+AVG  LE Q     
Sbjct: 1083 I---RSSDVSSNKTSS-MNGMGVGASAGKALSSAELLARIRGNQERAVGAGLEQQFGLAS 1138

Query: 437  XXXXXXXXSH--------NLGGAPPEVLIRQICTFIQQRGGSCDSASIVQHFRDRIPSKD 282
                     +        NL G  PE+LIR+ICTFIQQRGG  DSA+IV HF+DRI  KD
Sbjct: 1139 TSANRAGSENNGVSRPSKNLSGVQPEILIRKICTFIQQRGGITDSATIVNHFKDRILEKD 1198

Query: 281  LPVFKSLLKEIATLQRNPNGSSWILKPEYQ 192
            +P+FK+LLKEIATL+++PNG  W+LKPEY+
Sbjct: 1199 MPLFKNLLKEIATLEKDPNGKVWVLKPEYR 1228


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