BLASTX nr result

ID: Atractylodes22_contig00008955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008955
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150390.1| PREDICTED: methyl-CpG-binding domain-contain...   210   5e-52
ref|XP_002331442.1| methyl binding domain protein [Populus trich...   208   1e-51
ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-contain...   208   2e-51
ref|XP_004163256.1| PREDICTED: methyl-CpG-binding domain-contain...   202   1e-49
ref|XP_002526239.1| DNA binding protein, putative [Ricinus commu...   199   1e-48

>ref|XP_004150390.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
           [Cucumis sativus]
          Length = 342

 Score =  210 bits (534), Expect = 5e-52
 Identities = 106/198 (53%), Positives = 132/198 (66%), Gaps = 19/198 (9%)
 Frame = -3

Query: 794 TPSSSRYPSKRVVPKVGGFTIQCAKCFKWRLVPDKERYEAIREHIAEQPFYCETTRQWDR 615
           TP+SSR     V+P VG FT+QCA CFKWRL+P KE+YE IREH+ E+PFYCET R W  
Sbjct: 96  TPNSSR-----VLPSVGAFTVQCAGCFKWRLIPTKEKYEEIREHLLEKPFYCETARGWRP 150

Query: 614 DISCDDPTDIEQDGTRIWAIDKPNIAQPPPGWXXXXXXXXXXXXKFADVYYISPTGTKLR 435
           DISCDDP DI QDG+R+WAIDKPNIAQPPPGW            KFADVYY +P+G KLR
Sbjct: 151 DISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKKLR 210

Query: 434 SIPEVQGYLMTHPEH-AQGVSPAHFSFKVPRRLRD-----RKPPKS------------VE 309
           S+ ++Q YL+ HPE+  +GVS   FSF++P+ LR+     R+P  +            V 
Sbjct: 211 SMVDIQKYLIEHPEYQTEGVSMTRFSFQIPKPLREDYVRKRRPNMNASCDASKLESGEVR 270

Query: 308 PIMWAGPEDNN-LHLAEP 258
           PI WA P+D+  L L +P
Sbjct: 271 PISWARPDDSTALQLGKP 288


>ref|XP_002331442.1| methyl binding domain protein [Populus trichocarpa]
           gi|222873656|gb|EEF10787.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 343

 Score =  208 bits (530), Expect = 1e-51
 Identities = 98/184 (53%), Positives = 126/184 (68%), Gaps = 15/184 (8%)
 Frame = -3

Query: 764 RVVPKVGGFTIQCAKCFKWRLVPDKERYEAIREHIAEQPFYCETTRQWDRDISCDDPTDI 585
           RV+P VG FT+QCAKCFKWRL+P K++YE +REHI E+PF+CET R+W  DISCDDPTDI
Sbjct: 102 RVLPSVGAFTVQCAKCFKWRLIPTKQKYEELREHILEEPFFCETAREWRPDISCDDPTDI 161

Query: 584 EQDGTRIWAIDKPNIAQPPPGWXXXXXXXXXXXXKFADVYYISPTGTKLRSIPEVQGYLM 405
           +QDG+R+WAIDKPNIAQPPPGW            KFADVYY +P+G +LRS+ E+Q YL+
Sbjct: 162 DQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYQAPSGKRLRSMVEIQKYLI 221

Query: 404 THPEHAQ-GVSPAHFSFKVPRRL-----RDRKP--------PKSVEPIMWAGPED-NNLH 270
            HPE+ + G++   FSF++P+ L     R ++P        P    P+ W GP D   L 
Sbjct: 222 EHPEYMRDGITLTQFSFQIPKPLQENYVRKKRPRLSASCLEPGEANPLKWVGPGDCTELQ 281

Query: 269 LAEP 258
           L  P
Sbjct: 282 LGRP 285


>ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-containing protein 2 [Vitis
           vinifera] gi|297736061|emb|CBI24099.3| unnamed protein
           product [Vitis vinifera]
          Length = 354

 Score =  208 bits (529), Expect = 2e-51
 Identities = 106/199 (53%), Positives = 132/199 (66%), Gaps = 14/199 (7%)
 Frame = -3

Query: 788 SSSRYPSKRVVPKVGGFTIQCAKCFKWRLVPDKERYEAIREHIAEQPFYCETTRQWDRDI 609
           S++  PS RV+P VG FT+QCA CFKWRL+P KE+YE IREHI EQPF CET R+W  ++
Sbjct: 95  STTNAPS-RVLPSVGAFTVQCANCFKWRLIPTKEKYEEIREHILEQPFVCETAREWRPNV 153

Query: 608 SCDDPTDIEQDGTRIWAIDKPNIAQPPPGWXXXXXXXXXXXXKFADVYYISPTGTKLRSI 429
           SCDDP DI QDG+R+WAIDKPNIAQPP GW            KFADVYY++P+G +LRS+
Sbjct: 154 SCDDPADISQDGSRLWAIDKPNIAQPPAGWQRLLRIRGEGSTKFADVYYVAPSGKRLRSM 213

Query: 428 PEVQGYLMTHPEH-AQGVSPAHFSFKVPRRLRD---RKPPKSVEPIMWAGPEDNNLHL-- 267
            EVQ YL+ HPE+   GV+ + FSF++P+ L++   RK P  V     AG  D+      
Sbjct: 214 VEVQKYLLEHPEYMVHGVTLSQFSFQIPKPLQENYVRKRPARVN----AGSYDDTTSSGM 269

Query: 266 --------AEPLSWAGPAE 234
                     PLSWAGPAE
Sbjct: 270 SRPLEPGEVNPLSWAGPAE 288


>ref|XP_004163256.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like,
           partial [Cucumis sativus]
          Length = 268

 Score =  202 bits (514), Expect = 1e-49
 Identities = 94/155 (60%), Positives = 115/155 (74%), Gaps = 1/155 (0%)
 Frame = -3

Query: 794 TPSSSRYPSKRVVPKVGGFTIQCAKCFKWRLVPDKERYEAIREHIAEQPFYCETTRQWDR 615
           TP+SSR     V+P VG FT+QCA CFKWRL+P KE+YE IREH+ E+PFYCET R W  
Sbjct: 96  TPNSSR-----VLPSVGAFTVQCAGCFKWRLIPTKEKYEEIREHLLEKPFYCETARGWRP 150

Query: 614 DISCDDPTDIEQDGTRIWAIDKPNIAQPPPGWXXXXXXXXXXXXKFADVYYISPTGTKLR 435
           DISCDDP DI QDG+R+WAIDKPNIAQPPPGW            KFADVYY +P+G KLR
Sbjct: 151 DISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKKLR 210

Query: 434 SIPEVQGYLMTHPEH-AQGVSPAHFSFKVPRRLRD 333
           S+ ++Q YL+ HPE+  +GVS   FSF++P+ LR+
Sbjct: 211 SMVDIQKYLIEHPEYQTEGVSMTRFSFQIPKPLRE 245


>ref|XP_002526239.1| DNA binding protein, putative [Ricinus communis]
           gi|223534433|gb|EEF36136.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 271

 Score =  199 bits (505), Expect = 1e-48
 Identities = 93/152 (61%), Positives = 114/152 (75%), Gaps = 4/152 (2%)
 Frame = -3

Query: 764 RVVPKVGGFTIQCAKCFKWRLVPDKERYEAIREHIAEQPFYCETTRQWDRDISCDDPTDI 585
           RV+P VG FT+QCAKCFKWRL+P KE+YE IREHI EQPFYCET R+W  DISC+DP DI
Sbjct: 101 RVLPSVGAFTVQCAKCFKWRLIPTKEKYEEIREHILEQPFYCETAREWRPDISCNDPADI 160

Query: 584 EQDGTRIWAIDKPNIAQPPPGWXXXXXXXXXXXXKFADVYYISPTGTKLRSIPEVQGYLM 405
            QDG+R+WAIDKPNIAQPP GW            KFADVYY +P+G +LRS+ E++ YLM
Sbjct: 161 SQDGSRLWAIDKPNIAQPPRGWQRLLRIRGEGSSKFADVYYQAPSGKRLRSMVEIERYLM 220

Query: 404 THPEHAQ-GVSPAHFSFKVPRRLRD---RKPP 321
            +PE+ Q GV  + FSF++PR L++   RK P
Sbjct: 221 ANPEYVQNGVKLSQFSFQIPRPLQENYVRKRP 252


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