BLASTX nr result

ID: Atractylodes22_contig00008882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008882
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...    94   1e-17
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...    83   2e-14
ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g...    83   2e-14
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...    82   6e-14
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...    81   8e-14

>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
           lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
           ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
 Frame = +3

Query: 6   EAIETAGRYCPMLKTLKVNHE-ECSFNLDTTIQNEMAIAIGXXXXXXXXXXXIGDIMSNI 182
           E+++  G+ CP LKTLK+N E +  FN D    NE A+AI             G+I++N+
Sbjct: 484 ESLKVVGQSCPNLKTLKLNSEPDPKFN-DDEFNNEEALAIAESMPELRHLQLFGNILTNV 542

Query: 183 GLQAILDGCRHLKSLDLSECLYVDLKGDIGKRCSQQIKRLKLPDDN 320
           GL AILDGC HL+ LDL +C  VDL GD+ KRC ++IK LK P D+
Sbjct: 543 GLNAILDGCPHLEHLDLRKCSNVDLTGDLEKRCVERIKDLKRPTDS 588



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/108 (34%), Positives = 58/108 (53%)
 Frame = +3

Query: 6   EAIETAGRYCPMLKTLKVNHEECSFNLDTTIQNEMAIAIGXXXXXXXXXXXIGDIMSNIG 185
           E +   G+ CP L TLK+N           +++  AIAI            +G+ ++N G
Sbjct: 154 ECLSVVGQSCPHLTTLKLNRRP-RVEFVINMRDHNAIAIAESMPELRHLQLLGNALTNTG 212

Query: 186 LQAILDGCRHLKSLDLSECLYVDLKGDIGKRCSQQIKRLKLPDDNLIE 329
           L AILD C HL  LDL +C  ++L  D  K+C ++IK L+ P+D++ +
Sbjct: 213 LNAILDSCTHLDHLDLRQCYNINLVEDFMKQCVERIKYLRCPNDSIAD 260


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/112 (42%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
 Frame = +3

Query: 3   KEAIETAGRYCPMLKTLKVN-------HEECSFNLDTTIQNEMAIAIGXXXXXXXXXXXI 161
           ++ +E  GR C  LKTLK N       H EC         +E A AI             
Sbjct: 157 RDPLEAVGRCCRHLKTLKFNMKGYRRPHIEC---------DEEAFAIAETMPTLHHLQLF 207

Query: 162 GDIMSNIGLQAILDGCRHLKSLDLSECLYVDLKGDIGKRCSQQIKRLKLPDD 317
           G+ ++N GL AILDGC HL+SLDL +C  V+L G +GKRC++QIK L+LP D
Sbjct: 208 GNKLTNEGLLAILDGCPHLESLDLRQCFNVNLAGSLGKRCAEQIKELRLPCD 259


>ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482930|gb|AES64133.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 332

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/104 (42%), Positives = 60/104 (57%)
 Frame = +3

Query: 6   EAIETAGRYCPMLKTLKVNHEECSFNLDTTIQNEMAIAIGXXXXXXXXXXXIGDIMSNIG 185
           + +E  GR CP LKT K N E   F       ++ A +I            +G+ MS  G
Sbjct: 162 DPLEAIGRCCPQLKTFKFNIE--GFRRPRMEFDDEAFSIAKTMPGLRHLMLVGNKMSKDG 219

Query: 186 LQAILDGCRHLKSLDLSECLYVDLKGDIGKRCSQQIKRLKLPDD 317
           L+AILDGC HL+SLD+ +C  + L+G +GKRC +QIK L+LP D
Sbjct: 220 LRAILDGCPHLESLDIRQCFNLSLRGSLGKRCREQIKYLRLPYD 263


>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/105 (43%), Positives = 61/105 (58%)
 Frame = +3

Query: 3   KEAIETAGRYCPMLKTLKVNHEECSFNLDTTIQNEMAIAIGXXXXXXXXXXXIGDIMSNI 182
           K+ +E  G+ CP LKTLK N E   +       +E A AI             G+ ++N 
Sbjct: 149 KDPLEAIGQCCPHLKTLKFNME--GYRRPHIECDEEAFAIAETMPGLHHLQLFGNKLTNE 206

Query: 183 GLQAILDGCRHLKSLDLSECLYVDLKGDIGKRCSQQIKRLKLPDD 317
           GL AILDGC  L+SLDL +C  V+L G +GKRC++QIK L+LP D
Sbjct: 207 GLLAILDGCPLLESLDLRQCFNVNLAGSLGKRCAEQIKELRLPCD 251


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
 Frame = +3

Query: 3   KEAIETAGRYCPMLKTLKVN-------HEECSFNLDTTIQNEMAIAIGXXXXXXXXXXXI 161
           KE +E  G+ CP LK+ ++N       H EC         +E A+AI             
Sbjct: 156 KEVLEAIGQCCPRLKSFRLNCQGFRHPHIEC---------DEEALAIAQNMPGLKSLQLF 206

Query: 162 GDIMSNIGLQAILDGCRHLKSLDLSECLYVDLKGDIGKRCSQQIKRLKLPDDN 320
           G+ ++N GL AILDGC HL+SLDL +C  V+L G++ KRC++QIK L+ P+D+
Sbjct: 207 GNKLTNNGLLAILDGCCHLESLDLRQCFNVNLGGNLAKRCAEQIKILRYPNDS 259


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