BLASTX nr result

ID: Atractylodes22_contig00008880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008880
         (1020 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...   187   5e-45
ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus ...   172   1e-40
sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat ...   171   3e-40
ref|XP_002863254.1| hypothetical protein ARALYDRAFT_332995 [Arab...   169   1e-39
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   163   7e-38

>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
            lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
            ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score =  187 bits (474), Expect = 5e-45
 Identities = 109/256 (42%), Positives = 148/256 (57%), Gaps = 4/256 (1%)
 Frame = +2

Query: 260  TSRKTKQQRQVK-QPTRNLLELPEDVMANILCRVGVLDRLRNVQKVCTTWHKIYKDPAMW 436
            +S  T     VK +  RN  ELP ++ ++IL R+G +D L N QKVC +W ++ KDP+MW
Sbjct: 329  SSTSTSVSSLVKDEEVRNWAELPPELTSSILGRLGTIDILENAQKVCRSWRRVCKDPSMW 388

Query: 437  RVIFMDTRPLRGLDIRQVYAMLKHVVDRSQGQLIDITMALFCDDEFLLYVAERSSQLRRI 616
            R I MD     G     +  M +H VDRSQG L++I +  F  DE L Y+A+RSS LR +
Sbjct: 389  RKIDMDNLGDLGAMGYDLEIMCRHAVDRSQGGLVEIDIWYFGTDELLNYIADRSSNLRTL 448

Query: 617  NIICCRSYVYRSWPEALKKFPLLEELSLYWTKISKEAIETVGRYCPMLKILKVNHEASRC 796
             +I C       + EA+ K PL+E L L    +S E+++ VG+ CP LK LK+N E    
Sbjct: 449  RLIMCYPIADEGFIEAVVKLPLIEYLELSHCSLSGESLKVVGQSCPNLKTLKLNSEPDPK 508

Query: 797  IMT---QNEIAIAIGXXXXXXXXXXXVGNIMSNIGLQMILDGCRHLKSLDLRQCLYIDLK 967
                   NE A+AI             GNI++N+GL  ILDGC HL+ LDLR+C  +DL 
Sbjct: 509  FNDDEFNNEEALAIAESMPELRHLQLFGNILTNVGLNAILDGCPHLEHLDLRKCSNVDL- 567

Query: 968  EGDLGKRCSQQIKCLK 1015
             GDL KRC ++IK LK
Sbjct: 568  TGDLEKRCVERIKDLK 583



 Score =  167 bits (422), Expect = 5e-39
 Identities = 96/247 (38%), Positives = 139/247 (56%), Gaps = 10/247 (4%)
 Frame = +2

Query: 305  RNLLELPEDVMANILCRVGVLDRLRNVQKVCTTWHKIYKDPAMWRVIFMDTRPLRGLDIR 484
            RN  ELP ++ ++IL R+GV++ L N QKVC +W ++ KDP+MWR I +D    R +   
Sbjct: 7    RNWAELPAELTSSILLRLGVVEILENAQKVCRSWRRVCKDPSMWRKIVIDNSGNRDIFKY 66

Query: 485  QVYAMLKHVVDRSQGQLIDITMALFCDDEFLLYVAER--------SSQLRRINIICCRSY 640
             + +M +H VDRSQG L++I +  F  D+ L Y+A+R        SS LR + ++ C   
Sbjct: 67   DLDSMCRHAVDRSQGGLLEIDIEYFGTDKLLDYIADRFSLSLFSISSNLRSLRLVRCHQI 126

Query: 641  VYRSWPEALKKFPLLEELSLYWTKISKEAIETVGRYCPMLKILKVNH--EASRCIMTQNE 814
              +   EA+ K PLLE+L + +   S E +  VG+ CP L  LK+N        I  ++ 
Sbjct: 127  TDKGVAEAVVKLPLLEDLEVSYCSFSGECLSVVGQSCPHLTTLKLNRRPRVEFVINMRDH 186

Query: 815  IAIAIGXXXXXXXXXXXVGNIMSNIGLQMILDGCRHLKSLDLRQCLYIDLKEGDLGKRCS 994
             AIAI            +GN ++N GL  ILD C HL  LDLRQC  I+L E D  K+C 
Sbjct: 187  NAIAIAESMPELRHLQLLGNALTNTGLNAILDSCTHLDHLDLRQCYNINLVE-DFMKQCV 245

Query: 995  QQIKCLK 1015
            ++IK L+
Sbjct: 246  ERIKYLR 252


>ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223534044|gb|EEF35763.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 305

 Score =  172 bits (436), Expect = 1e-40
 Identities = 100/240 (41%), Positives = 147/240 (61%), Gaps = 3/240 (1%)
 Frame = +2

Query: 305  RNLLELPEDVMANILCRVGVLDRLRNVQKVCTTWHKIYKDPAMWRVIFMDTRPLRGL-DI 481
            RN  ELP DV A IL +VG  D L + Q VC++W+ + KDP+MWR +  +  PL    D+
Sbjct: 17   RNWAELPRDVTALILDKVGAFDILGSAQFVCSSWNSVCKDPSMWRSV--EIHPLCDFWDL 74

Query: 482  R-QVYAMLKHVVDRSQGQLIDITMALFCDDEFLLYVAERSSQLRRINIICCRSYVYRSWP 658
               + A+ ++ VDRS+G LI I++  F  D  + Y+A+RSS L+R+ ++   +    ++ 
Sbjct: 75   PFDLEALCRNAVDRSRGGLISISIEYFATDSLIKYIADRSSHLKRLRLLSSYTLSDAAFS 134

Query: 659  EALKKFPLLEELSLYWTKISKEAIETVGRYCPMLKILKVNHEA-SRCIMTQNEIAIAIGX 835
            +A KKFPLLEEL + +  +S EA+  VG  CP+L+ LK+N +   R  +  NE A+AIG 
Sbjct: 135  KAAKKFPLLEELDISYCSLSTEALVGVGISCPLLRSLKLNCQGYKRPHIESNEEALAIGQ 194

Query: 836  XXXXXXXXXXVGNIMSNIGLQMILDGCRHLKSLDLRQCLYIDLKEGDLGKRCSQQIKCLK 1015
                       GN ++N G+Q ILDGC HL+ LDLRQC  + L EG+LG  C ++IK L+
Sbjct: 195  WMPHLRYLQIFGNKLTNDGVQAILDGCPHLEFLDLRQCFNVHL-EGELGMLCGERIKDLR 253


>sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat protein 23
            gi|5732066|gb|AAD48965.1|AF147263_7 contains similarity
            to Medicago truncatula N7 protein (GB:Y17613)
            [Arabidopsis thaliana] gi|7267310|emb|CAB81092.1|
            AT4g05500 [Arabidopsis thaliana]
          Length = 449

 Score =  171 bits (432), Expect = 3e-40
 Identities = 97/241 (40%), Positives = 141/241 (58%), Gaps = 4/241 (1%)
 Frame = +2

Query: 305  RNLLELPEDVMANILCRVGVLDRLRNVQKVCTTWHKIYKDPAMWRVIFMDTRPLRGLDIR 484
            RN  ELP  + ++IL R+G ++ L+N QKVC  WH++ KDP+MWR I +D R  R     
Sbjct: 179  RNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAAFKY 238

Query: 485  QVYAMLKHVVDRSQGQLIDITMALFCDDEFLLYVAERSSQLRRINIICCRSYVYRSWPEA 664
             + +M +H VDRS G LI+I +  +  ++ ++Y+A+RSS L+ + ++ C         +A
Sbjct: 239  DLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDEGVAKA 298

Query: 665  LKKFPLLEELSLYWTKISKEAIETVGRYCPMLKILKVNHEASRCIMTQN----EIAIAIG 832
            + K PLLE L + +   S E++  +GR CP LK LK+N      IM  N    + A AI 
Sbjct: 299  VSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLNRAPE--IMFSNSGFDDNAKAIA 356

Query: 833  XXXXXXXXXXXVGNIMSNIGLQMILDGCRHLKSLDLRQCLYIDLKEGDLGKRCSQQIKCL 1012
                       +GN ++N GL  ILDGC HL+ LDLRQC  I+L  GDL KRC ++IK L
Sbjct: 357  ESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINL-VGDLKKRCFERIKDL 415

Query: 1013 K 1015
            +
Sbjct: 416  R 416


>ref|XP_002863254.1| hypothetical protein ARALYDRAFT_332995 [Arabidopsis lyrata subsp.
            lyrata] gi|297309088|gb|EFH39513.1| hypothetical protein
            ARALYDRAFT_332995 [Arabidopsis lyrata subsp. lyrata]
          Length = 296

 Score =  169 bits (428), Expect = 1e-39
 Identities = 97/239 (40%), Positives = 136/239 (56%), Gaps = 2/239 (0%)
 Frame = +2

Query: 305  RNLLELPEDVMANILCRVGVLDRLRNVQKVCTTWHKIYKDPAMWRVIFMDTRPLRGLDIR 484
            RN  ELP ++  +IL R+G +D L N QKVCT+W ++  DP MWR I M      G  I 
Sbjct: 16   RNWAELPSELTFSILNRLGAIDILENAQKVCTSWRRVSLDPLMWRKIDMHYLGDMGSMIY 75

Query: 485  QVYAMLKHVVDRSQGQLIDITMALFCDDEFLLYVAERSSQLRRINIICCRSYVYRSWPEA 664
               +M +H VDRSQG L++I +  F  D+ L Y+A+RSS LR + +  C         EA
Sbjct: 76   DFESMCRHAVDRSQGGLVEIDIWHFGTDDLLNYIADRSSNLRSLRLAMCNQITDEGVTEA 135

Query: 665  LKKFPLLEELSLYWTKISKEAIETVGRYCPMLKILKVNHEAS-RCIMTQNEI-AIAIGXX 838
            + K PLLE+L + +     E++  VG+ CP LK LK+N      C + +  I AI I   
Sbjct: 136  VVKLPLLEDLDVSFCAFLGESLRVVGQSCPNLKTLKLNRSPGIDCFLFRPNINAIVIAES 195

Query: 839  XXXXXXXXXVGNIMSNIGLQMILDGCRHLKSLDLRQCLYIDLKEGDLGKRCSQQIKCLK 1015
                      GN ++N GL  ILDGC H++ LDLR+C  I+L E D+ KRCS++I+ L+
Sbjct: 196  MPNLRHIQLFGNEINNTGLNAILDGCPHVEHLDLRKCFNINLVE-DIEKRCSERIRVLR 253


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
            gi|147853333|emb|CAN82327.1| hypothetical protein
            VITISV_041807 [Vitis vinifera]
            gi|297740788|emb|CBI30970.3| unnamed protein product
            [Vitis vinifera]
          Length = 321

 Score =  163 bits (412), Expect = 7e-38
 Identities = 96/249 (38%), Positives = 142/249 (57%), Gaps = 5/249 (2%)
 Frame = +2

Query: 284  RQVKQPTRNLLELPEDVMANILCRVGVLDRLRNVQKVCTTWHKIYKDPAMWRVIFM---- 451
            R+ ++  RN  ELP DV + IL ++  ++ L + Q VC+ W K+ ++P MWR I M    
Sbjct: 11   REEEEEERNWQELPRDVTSMILSKLNAVEILSSAQFVCSFWRKLCREPMMWRNIDMHNLG 70

Query: 452  DTRPLRGLDIRQVYAMLKHVVDRSQGQLIDITMALFCDDEFLLYVAERSSQLRRINIICC 631
            D   L G D+ +   M +H VDRS GQL+ I +  F  D  L Y+ +RSS +R + ++ C
Sbjct: 71   DLCDL-GYDLEE---MARHAVDRSGGQLLSICIDDFATDNLLNYIIDRSSHIRHLRLVSC 126

Query: 632  RSYVYRSWPEALKKFPLLEELSLYWTKISKEAIETVGRYCPMLKILKVNHEASRCIMTQ- 808
                     E +K+ PLL E+ L +   SKE +E +G+ CP LK  ++N +  R    + 
Sbjct: 127  YGISDDGLSEGIKRLPLLVEIDLCYCSFSKEVLEAIGQCCPRLKSFRLNCQGFRHPHIEC 186

Query: 809  NEIAIAIGXXXXXXXXXXXVGNIMSNIGLQMILDGCRHLKSLDLRQCLYIDLKEGDLGKR 988
            +E A+AI             GN ++N GL  ILDGC HL+SLDLRQC  ++L  G+L KR
Sbjct: 187  DEEALAIAQNMPGLKSLQLFGNKLTNNGLLAILDGCCHLESLDLRQCFNVNL-GGNLAKR 245

Query: 989  CSQQIKCLK 1015
            C++QIK L+
Sbjct: 246  CAEQIKILR 254


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