BLASTX nr result

ID: Atractylodes22_contig00008857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008857
         (837 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302108.1| predicted protein [Populus trichocarpa] gi|1...   234   2e-59
ref|XP_002306780.1| predicted protein [Populus trichocarpa] gi|1...   234   2e-59
ref|XP_003518511.1| PREDICTED: 40S ribosomal protein S18-like [G...   232   7e-59
gb|ACS96445.1| S18.A ribosomal protein [Jatropha curcas]              232   9e-59
ref|XP_002520719.1| 40S ribosomal protein S18, putative [Ricinus...   232   9e-59

>ref|XP_002302108.1| predicted protein [Populus trichocarpa] gi|118481417|gb|ABK92651.1|
           unknown [Populus trichocarpa]
           gi|222843834|gb|EEE81381.1| predicted protein [Populus
           trichocarpa]
          Length = 152

 Score =  234 bits (596), Expect = 2e-59
 Identities = 123/172 (71%), Positives = 126/172 (73%)
 Frame = +3

Query: 3   FQHILRVQNTNVDGKQKIMFAMTSIKGIGRRFANIVCKKADVDMNKRAGEXXXXXXXXXX 182
           FQHILRV NTNVDGKQKIMFA+TSIKGIGRRFANIVCKKADVDMNKRA            
Sbjct: 9   FQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRA------------ 56

Query: 183 XXXXXXXXXXXXNKRAGELSNAEIDNLMTIVANPRQFKIPDWFLNRKKDYKDGKYSQVTS 362
                           GELS  E+D LMTIVANPRQFKIPDWFLNR+KDYKDGKYSQV S
Sbjct: 57  ----------------GELSAEELDKLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 100

Query: 363 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 518
           NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH             SKKR
Sbjct: 101 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152


>ref|XP_002306780.1| predicted protein [Populus trichocarpa] gi|118481499|gb|ABK92692.1|
           unknown [Populus trichocarpa]
           gi|222856229|gb|EEE93776.1| predicted protein [Populus
           trichocarpa]
          Length = 152

 Score =  234 bits (596), Expect = 2e-59
 Identities = 123/172 (71%), Positives = 126/172 (73%)
 Frame = +3

Query: 3   FQHILRVQNTNVDGKQKIMFAMTSIKGIGRRFANIVCKKADVDMNKRAGEXXXXXXXXXX 182
           FQHILRV NTNVDGKQKIMFA+TSIKGIGRRFANIVCKKADVDMNKRA            
Sbjct: 9   FQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRA------------ 56

Query: 183 XXXXXXXXXXXXNKRAGELSNAEIDNLMTIVANPRQFKIPDWFLNRKKDYKDGKYSQVTS 362
                           GELS  E+D LMTIVANPRQFKIPDWFLNR+KDYKDGKYSQV S
Sbjct: 57  ----------------GELSAEELDKLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 100

Query: 363 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 518
           NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH             SKKR
Sbjct: 101 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152


>ref|XP_003518511.1| PREDICTED: 40S ribosomal protein S18-like [Glycine max]
          Length = 152

 Score =  232 bits (592), Expect = 7e-59
 Identities = 121/172 (70%), Positives = 126/172 (73%)
 Frame = +3

Query: 3   FQHILRVQNTNVDGKQKIMFAMTSIKGIGRRFANIVCKKADVDMNKRAGEXXXXXXXXXX 182
           FQHILRV NTNVDGKQKIMFA+TSIKGIGRRFANI CKKADVDMNKRA            
Sbjct: 9   FQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANICCKKADVDMNKRA------------ 56

Query: 183 XXXXXXXXXXXXNKRAGELSNAEIDNLMTIVANPRQFKIPDWFLNRKKDYKDGKYSQVTS 362
                           GELS  E+D++MT+VANPRQFKIPDWFLNRKKDYKDGKYSQV S
Sbjct: 57  ----------------GELSAIELDSVMTVVANPRQFKIPDWFLNRKKDYKDGKYSQVVS 100

Query: 363 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 518
           NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH             SKKR
Sbjct: 101 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152


>gb|ACS96445.1| S18.A ribosomal protein [Jatropha curcas]
          Length = 152

 Score =  232 bits (591), Expect = 9e-59
 Identities = 122/172 (70%), Positives = 125/172 (72%)
 Frame = +3

Query: 3   FQHILRVQNTNVDGKQKIMFAMTSIKGIGRRFANIVCKKADVDMNKRAGEXXXXXXXXXX 182
           FQHILRV NTNVDGKQKIMFA+TSIKGIGRRFANIVCKKADVDMNKRA            
Sbjct: 9   FQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRA------------ 56

Query: 183 XXXXXXXXXXXXNKRAGELSNAEIDNLMTIVANPRQFKIPDWFLNRKKDYKDGKYSQVTS 362
                           GELS  E+D LM IVANPRQFKIPDWFLNR+KDYKDGKYSQV S
Sbjct: 57  ----------------GELSAEELDKLMVIVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 100

Query: 363 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 518
           NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH             SKKR
Sbjct: 101 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152


>ref|XP_002520719.1| 40S ribosomal protein S18, putative [Ricinus communis]
           gi|223540104|gb|EEF41681.1| 40S ribosomal protein S18,
           putative [Ricinus communis] gi|313586541|gb|ADR71281.1|
           40S ribosomal protein S18A [Hevea brasiliensis]
          Length = 152

 Score =  232 bits (591), Expect = 9e-59
 Identities = 122/172 (70%), Positives = 125/172 (72%)
 Frame = +3

Query: 3   FQHILRVQNTNVDGKQKIMFAMTSIKGIGRRFANIVCKKADVDMNKRAGEXXXXXXXXXX 182
           FQHILRV NTNVDGKQKIMFA+TSIKGIGRRFANIVCKKADVDMNKRA            
Sbjct: 9   FQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRA------------ 56

Query: 183 XXXXXXXXXXXXNKRAGELSNAEIDNLMTIVANPRQFKIPDWFLNRKKDYKDGKYSQVTS 362
                           GELS  E+D LM IVANPRQFKIPDWFLNR+KDYKDGKYSQV S
Sbjct: 57  ----------------GELSAEELDKLMVIVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 100

Query: 363 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 518
           NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH             SKKR
Sbjct: 101 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152


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