BLASTX nr result

ID: Atractylodes22_contig00008849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008849
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   206   2e-51
ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   195   5e-48
ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   194   8e-48
ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|2...   191   5e-47
ref|XP_002894533.1| ubiquitin-protein ligase 1 [Arabidopsis lyra...   174   7e-42

>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score =  206 bits (524), Expect = 2e-51
 Identities = 110/187 (58%), Positives = 133/187 (71%), Gaps = 1/187 (0%)
 Frame = -3

Query: 560  EIAAENGIVSVAIDLLMDFKARTKSQDELPVSKCISAXXXXXXXXLQSRPEKNSDSIEGT 381
            EIAA NGIVS AID+LM FKAR +  +E+ V KCISA        LQSR   +S++ EG 
Sbjct: 1828 EIAARNGIVSAAIDILMSFKARNELGNEVLVPKCISALLLILDNLLQSRSRFSSETTEGN 1887

Query: 380  KTGSLPDSMGEKAPQEVADKNLTPAAGDK-DKETNNVFEQIFGNSTGYLTIEEGNRVLTI 204
              GS+PDS GE AP  +        A D  +KE ++  E+I G STGYLTIEE  RVL +
Sbjct: 1888 AVGSVPDSTGEHAPLSIPPDAENKLASDAHEKEPDSTLEKILGKSTGYLTIEESRRVLLV 1947

Query: 203  VCDMLKEHVPDMVMQAVLLLCARLTKTHTLAMHFLENGGMVALFSIPRTCFFLVYDTVAS 24
             C++LK+ VP +VMQAVL LCARLTKTH+LA+ FLENGGM ALFS+PR+CFF  YDTVAS
Sbjct: 1948 ACELLKQQVPAVVMQAVLQLCARLTKTHSLALEFLENGGMAALFSLPRSCFFPGYDTVAS 2007

Query: 23   AIIRHLI 3
            AIIRHL+
Sbjct: 2008 AIIRHLL 2014


>ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3713

 Score =  195 bits (495), Expect = 5e-48
 Identities = 101/186 (54%), Positives = 130/186 (69%)
 Frame = -3

Query: 560  EIAAENGIVSVAIDLLMDFKARTKSQDELPVSKCISAXXXXXXXXLQSRPEKNSDSIEGT 381
            EIAA+NGI+S  ID+L +FK R +   E+PV KCISA        +QSRP+   ++IEGT
Sbjct: 1456 EIAAQNGIISTIIDILTNFKGRQELGKEIPVPKCISALLLILDQMVQSRPKV--ENIEGT 1513

Query: 380  KTGSLPDSMGEKAPQEVADKNLTPAAGDKDKETNNVFEQIFGNSTGYLTIEEGNRVLTIV 201
            +T SLPDS GE+ P  V  K     +   +KE    FE I G STG+ TI+E  ++L I 
Sbjct: 1514 QTASLPDSSGEQFPDTVLPKE--NKSNGNEKEPAMAFENILGKSTGFATIDESRKLLDIA 1571

Query: 200  CDMLKEHVPDMVMQAVLLLCARLTKTHTLAMHFLENGGMVALFSIPRTCFFLVYDTVASA 21
            CD++K+HVP +VMQAVL LCARLTKTH LA+ FLE G +VALF++PRTCFF  YD+V SA
Sbjct: 1572 CDLIKQHVPAVVMQAVLQLCARLTKTHALALQFLEKGSLVALFNLPRTCFFPGYDSVVSA 1631

Query: 20   IIRHLI 3
            I+RHL+
Sbjct: 1632 IVRHLL 1637


>ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3739

 Score =  194 bits (493), Expect = 8e-48
 Identities = 101/186 (54%), Positives = 131/186 (70%)
 Frame = -3

Query: 560  EIAAENGIVSVAIDLLMDFKARTKSQDELPVSKCISAXXXXXXXXLQSRPEKNSDSIEGT 381
            EIAA+NGI+S  ID+L +FK R +   ELPV KCISA        +QSRP+   +++EGT
Sbjct: 1469 EIAAQNGIISTIIDILTNFKGRQELGKELPVPKCISALLLILDQMVQSRPKV--ENMEGT 1526

Query: 380  KTGSLPDSMGEKAPQEVADKNLTPAAGDKDKETNNVFEQIFGNSTGYLTIEEGNRVLTIV 201
            +TGSLPDS GE+    V  K     +   +KE    FE I G STG+ TI+E +++L I 
Sbjct: 1527 QTGSLPDSSGEQFSDTVLPKEKN--SNGIEKEPAMAFENILGKSTGFATIDESHKLLDIA 1584

Query: 200  CDMLKEHVPDMVMQAVLLLCARLTKTHTLAMHFLENGGMVALFSIPRTCFFLVYDTVASA 21
            CD++K+HVP +VMQAVL LCARLTKTH LA+ FLENGG+ ALF++PRTC F  YD+V SA
Sbjct: 1585 CDLIKQHVPAVVMQAVLQLCARLTKTHALALQFLENGGLAALFNLPRTCLFPGYDSVVSA 1644

Query: 20   IIRHLI 3
            I+RHL+
Sbjct: 1645 IVRHLL 1650


>ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|222846131|gb|EEE83678.1|
            predicted protein [Populus trichocarpa]
          Length = 3728

 Score =  191 bits (486), Expect = 5e-47
 Identities = 99/186 (53%), Positives = 133/186 (71%)
 Frame = -3

Query: 560  EIAAENGIVSVAIDLLMDFKARTKSQDELPVSKCISAXXXXXXXXLQSRPEKNSDSIEGT 381
            EIAA+NGIV+ A D+LM+FKA   S  E+ V KC+SA        LQSRP  +S+++ GT
Sbjct: 1463 EIAAQNGIVAAATDVLMNFKASNASGSEILVPKCVSALLLILDNMLQSRPRISSETMGGT 1522

Query: 380  KTGSLPDSMGEKAPQEVADKNLTPAAGDKDKETNNVFEQIFGNSTGYLTIEEGNRVLTIV 201
            +T S PDS     P    ++ +T  +   +KE+    E+I G STGYLTIEE ++VL +V
Sbjct: 1523 QTVSPPDS---SVPASGTEEKVT--SDFTEKESGTALEKILGKSTGYLTIEESHKVLLVV 1577

Query: 200  CDMLKEHVPDMVMQAVLLLCARLTKTHTLAMHFLENGGMVALFSIPRTCFFLVYDTVASA 21
            CD++K+HVP ++MQA+L LCARLTKTH LA+ FLENGG+ ALF++PR+CFF  Y TVASA
Sbjct: 1578 CDLMKQHVPAVIMQAILQLCARLTKTHVLALQFLENGGLTALFNLPRSCFFPGYQTVASA 1637

Query: 20   IIRHLI 3
            I+RHL+
Sbjct: 1638 IVRHLL 1643


>ref|XP_002894533.1| ubiquitin-protein ligase 1 [Arabidopsis lyrata subsp. lyrata]
            gi|297340375|gb|EFH70792.1| ubiquitin-protein ligase 1
            [Arabidopsis lyrata subsp. lyrata]
          Length = 3890

 Score =  174 bits (442), Expect = 7e-42
 Identities = 92/187 (49%), Positives = 127/187 (67%), Gaps = 1/187 (0%)
 Frame = -3

Query: 560  EIAAENGIVSVAIDLLMDFKARTKSQDELPVSKCISAXXXXXXXXLQSRPEKNSDSIEGT 381
            EIAA++GIV+VAI +L DF  +++S+ E+   KCISA        LQ++  ++S+ +EG 
Sbjct: 1650 EIAAQDGIVTVAIGILTDFNLKSESETEILAPKCISALLLVLSMMLQAQTRQSSEYVEGN 1709

Query: 380  KTGSLPDSMGEKAPQEVADKNLTPAAGDKDK-ETNNVFEQIFGNSTGYLTIEEGNRVLTI 204
              GSL  S    +PQ+         + D  K E+N   E IFG STGYLT+EEG++ L I
Sbjct: 1710 HGGSLEPS---DSPQDSTAVLKDALSSDVAKGESNQALESIFGKSTGYLTMEEGHKALLI 1766

Query: 203  VCDMLKEHVPDMVMQAVLLLCARLTKTHTLAMHFLENGGMVALFSIPRTCFFLVYDTVAS 24
             C ++K+ VP M+MQAVL LCARLTK+H LA+ FLENGG+ +LF++P+ CFF  YDTVAS
Sbjct: 1767 ACGLIKQRVPSMIMQAVLQLCARLTKSHDLALQFLENGGLSSLFNLPKKCFFPGYDTVAS 1826

Query: 23   AIIRHLI 3
             I+RHL+
Sbjct: 1827 VIVRHLV 1833


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