BLASTX nr result

ID: Atractylodes22_contig00008816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008816
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511395.1| zinc finger protein, putative [Ricinus commu...    69   5e-10
gb|ADL36681.1| DOF domain class transcription factor [Malus x do...    55   6e-06
ref|XP_002321600.1| f-box family protein [Populus trichocarpa] g...    55   8e-06

>ref|XP_002511395.1| zinc finger protein, putative [Ricinus communis]
           gi|223550510|gb|EEF51997.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 326

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 6/75 (8%)
 Frame = +3

Query: 12  LTPNYHGANLCSPFGGMTLDSINNSFME---RGLIAYDHQGNDVNDDTISALEVKP--KL 176
           L PNYHG  LCSPFG M++D  N +FME   R ++ YDHQGND      + ++VKP  KL
Sbjct: 227 LAPNYHG--LCSPFG-MSMDGSNGTFMETCQRLMLPYDHQGNDEQ----NTIDVKPNAKL 279

Query: 177 LALEWQDQ-TGCSSD 218
           L+LEWQ+Q  GCS D
Sbjct: 280 LSLEWQEQGQGCSHD 294


>gb|ADL36681.1| DOF domain class transcription factor [Malus x domestica]
          Length = 327

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/70 (47%), Positives = 47/70 (67%), Gaps = 6/70 (8%)
 Frame = +3

Query: 21  NYHGANLCS-PFGGMTLDSINNSFME---RGLIAYDHQGNDVNDDTISALEVKP--KLLA 182
           ++HG  +CS PFG  ++D  N +FM+   R ++ YD Q N  +   I+A++VKP  KLL+
Sbjct: 229 SFHG--ICSSPFGMSSIDGQNGNFMDSCQRLMLPYD-QANHEDHHQINAMDVKPNTKLLS 285

Query: 183 LEWQDQTGCS 212
           LEWQDQ GCS
Sbjct: 286 LEWQDQAGCS 295


>ref|XP_002321600.1| f-box family protein [Populus trichocarpa]
           gi|222868596|gb|EEF05727.1| f-box family protein
           [Populus trichocarpa]
          Length = 314

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 39/72 (54%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
 Frame = +3

Query: 12  LTPNYHGANLCSPFGGMTLDSINNSFME---RGLIAYDHQGNDVNDDTISALEVKP--KL 176
           L PNY G   CSPFG M+LD  + SFME   R ++ YD QGND + + I   +VKP  KL
Sbjct: 219 LAPNYSG--YCSPFG-MSLDGNSGSFMETCQRLMLPYD-QGNDHDQNPI---DVKPNTKL 271

Query: 177 LALEWQDQTGCS 212
           L+L+WQDQ GCS
Sbjct: 272 LSLDWQDQ-GCS 282


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