BLASTX nr result

ID: Atractylodes22_contig00008703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008703
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281726.1| PREDICTED: double-strand break repair protei...   169   4e-40
ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|2...   145   8e-33
ref|XP_002525759.1| meiotic recombination repair protein, putati...   139   5e-31
ref|XP_004146869.1| PREDICTED: LOW QUALITY PROTEIN: double-stran...   122   4e-26
ref|XP_004154884.1| PREDICTED: double-strand break repair protei...   117   2e-24

>ref|XP_002281726.1| PREDICTED: double-strand break repair protein MRE11 [Vitis vinifera]
            gi|302143084|emb|CBI20379.3| unnamed protein product
            [Vitis vinifera]
          Length = 731

 Score =  169 bits (428), Expect = 4e-40
 Identities = 97/219 (44%), Positives = 127/219 (57%), Gaps = 5/219 (2%)
 Frame = +2

Query: 2    VNKDDRMAFYSCLQYNLEETRKNISRDQDNMXXXXXXXXXXXXNCLXXXXXXXXXXXXDQ 181
            VNKDD+MAFYSC+QYNLEETR  I+RD D +             CL            + 
Sbjct: 456  VNKDDKMAFYSCVQYNLEETRSKIARDSDPLKFEEEDLILKVGECLEERVKERSVHSKET 515

Query: 182  -LFSTSAQYMENMVNKAPGGIGSAVSFSSDEETAQLSGSKSTARGKKGSLQQFKSARDVS 358
              F +SA+ +EN+ +K     GSAVSFS DE+  QLSGSKS  RG+KGS   FKS+ D S
Sbjct: 516  PQFMSSARSLENIRSKGTAETGSAVSFSDDEDPTQLSGSKSATRGRKGSSATFKSSHDAS 575

Query: 359  EVGK----TSSXXXXXXXXXXANSLKQTTLDAAMMFXXXXXXXXXXXXXXXXXXXXDEEN 526
            E GK    T            +++LKQ TLD+++ F                    DE+N
Sbjct: 576  EQGKGKSSTRGRGRGRGRGRSSSTLKQMTLDSSLGFRHSERSASVAATAAVRNLADDEDN 635

Query: 527  LDSASSDEPVQYGINELHDSSDDNESIQGKGRKRAAPRG 643
            ++S+SSDE  +YGINE+ DSS+++E++QGKGRKRAAPRG
Sbjct: 636  VESSSSDEAGKYGINEVDDSSENDENLQGKGRKRAAPRG 674


>ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|222871776|gb|EEF08907.1|
            predicted protein [Populus trichocarpa]
          Length = 772

 Score =  145 bits (365), Expect = 8e-33
 Identities = 92/221 (41%), Positives = 123/221 (55%), Gaps = 7/221 (3%)
 Frame = +2

Query: 2    VNKDDRMAFYSCLQYNLEETRKNISRDQDNMXXXXXXXXXXXXNCLXXXXXXXXXXXXDQ 181
            V+KDD+MAFY+C+QYNL+ETR  I++D D M              L            D 
Sbjct: 456  VSKDDKMAFYACVQYNLQETRSKIAKDSDTMKFEDEDL------ILKERVKERSVHSTDA 509

Query: 182  L-FSTSAQYMENMVNKAPGGIGSAVSFSSDEETAQLSGSKSTARGKKGSLQQFKSARDVS 358
              F++ AQ ME+       G+GSAVSFS +E+ AQ+SGS ST RG+KGS    +S+ DVS
Sbjct: 510  AQFTSGAQSMEDF-RSTSAGVGSAVSFSDEEDAAQISGSTSTTRGRKGSRVGSRSSHDVS 568

Query: 359  EVGK----TSSXXXXXXXXXXANSLKQTTLDAAMMFXXXXXXXXXXXXXXXXXXXXDEEN 526
            E GK                 +++LKQTTLDA + F                    ++EN
Sbjct: 569  ETGKGKTSARGRGRGRGRGRGSSNLKQTTLDATLGFRQSQRSASVSATAAVRSIAVEDEN 628

Query: 527  LDSASSDEPVQYGINELHDSSDDNESIQ--GKGRKRAAPRG 643
            +DSASS++  + G+NE+ DSS+D+ESIQ  GKGRKRAA RG
Sbjct: 629  VDSASSEDSKKLGMNEVADSSNDDESIQGKGKGRKRAAARG 669


>ref|XP_002525759.1| meiotic recombination repair protein, putative [Ricinus communis]
            gi|223534909|gb|EEF36595.1| meiotic recombination repair
            protein, putative [Ricinus communis]
          Length = 765

 Score =  139 bits (350), Expect = 5e-31
 Identities = 94/226 (41%), Positives = 120/226 (53%), Gaps = 12/226 (5%)
 Frame = +2

Query: 2    VNKDDRMAFYSCLQYNLEETRKNISRDQDNMXXXXXXXXXXXXNCLXXXXXXXXXXXXD- 178
            VNKDD+MAFYSC+QYNL+ETR  I++D D +             CL            D 
Sbjct: 456  VNKDDKMAFYSCVQYNLQETRNKIAKDSDTIKFEKEDIILKVGECLEERVKERSMHSKDA 515

Query: 179  QLFSTSAQYMENMVNKAPGGIGSAVSFSSDEETAQLSGSKSTARGKKGS-LQQFKSARDV 355
               S+SA  +E+  +    G+GSAVSFS DE+T QLSGSK+++R +KGS L    S  D 
Sbjct: 516  PQISSSAHSIEDFRSIGTAGVGSAVSFSDDEDTTQLSGSKASSRNQKGSRLVSRPSYDDA 575

Query: 356  SEV--GKTSS--------XXXXXXXXXXANSLKQTTLDAAMMFXXXXXXXXXXXXXXXXX 505
            SE   GKTS+                  +N+LKQTTLD ++ F                 
Sbjct: 576  SEADKGKTSTRGRGRGRGRGRGRGRGRGSNNLKQTTLDVSLGFRQSQRSASVAATAAVRS 635

Query: 506  XXXDEENLDSASSDEPVQYGINELHDSSDDNESIQGKGRKRAAPRG 643
               +EEN++SASS E  +  INE+ DSSDD E I GKG KRAAP G
Sbjct: 636  IADEEENVESASS-EDAENRINEVGDSSDDAERIPGKGGKRAAPIG 680


>ref|XP_004146869.1| PREDICTED: LOW QUALITY PROTEIN: double-strand break repair protein
            MRE11-like [Cucumis sativus]
          Length = 747

 Score =  122 bits (307), Expect = 4e-26
 Identities = 86/223 (38%), Positives = 120/223 (53%), Gaps = 9/223 (4%)
 Frame = +2

Query: 2    VNKDDRMAFYSCLQYNLEETRKNISRDQDNMXXXXXXXXXXXXNCL--------XXXXXX 157
            VNKDD+MAFYSC+QYNLEETR  IS D D++             CL              
Sbjct: 465  VNKDDKMAFYSCVQYNLEETRNKISHDADSLKFEEEDLILKVGECLEEKIYILQDRVKER 524

Query: 158  XXXXXXDQLFSTSAQYMENMVNKAPGGIGSAVSFSSDEETAQLSGSKSTARGKKGSLQQF 337
                  D +F++S Q  ++  +++   +GSAVSFS DE+ A+ SGSKST RG+K S    
Sbjct: 525  NTHSKNDTVFTSSIQSSKDFGSRSSMTVGSAVSFSDDEDAAKTSGSKST-RGRKVS---S 580

Query: 338  KSARDVSEVGKTSS-XXXXXXXXXXANSLKQTTLDAAMMFXXXXXXXXXXXXXXXXXXXX 514
            ++A D S   KTS+           ++SLKQTTLDAA+ F                    
Sbjct: 581  RAAEDTST--KTSTRGRGRGRGRGSSSSLKQTTLDAALGF-----RKSQRSATAAVQSIV 633

Query: 515  DEENLDSASSDEPVQYGINELHDSSDDNESIQGKGRKRAAPRG 643
            + + ++SASS E  +  + E++DSS+++ES+  KGRKR APRG
Sbjct: 634  NTDAMNSASSGEARENEVEEINDSSENDESLLSKGRKRTAPRG 676


>ref|XP_004154884.1| PREDICTED: double-strand break repair protein MRE11-like [Cucumis
            sativus]
          Length = 739

 Score =  117 bits (293), Expect = 2e-24
 Identities = 86/237 (36%), Positives = 120/237 (50%), Gaps = 23/237 (9%)
 Frame = +2

Query: 2    VNKDDRMAFYSCLQYNLEETRKNISRDQDNMXXXXXXXXXXXXNC--------------- 136
            VNKDD+MAFYSC+QYNLEETR  IS D D++             C               
Sbjct: 456  VNKDDKMAFYSCVQYNLEETRNKISHDADSLKFEEEDLILKVGECLEESPSFSFSSLPPS 515

Query: 137  -------LXXXXXXXXXXXXDQLFSTSAQYMENMVNKAPGGIGSAVSFSSDEETAQLSGS 295
                   L            D +F++S Q  ++  +++   +GSAVSFS DE+ A+ SGS
Sbjct: 516  LSFSHDALDRVKERNTHSKNDTVFTSSIQSSKDFGSRSSMTVGSAVSFSDDEDAAKTSGS 575

Query: 296  KSTARGKKGSLQQFKSARDVSEVGKTSS-XXXXXXXXXXANSLKQTTLDAAMMFXXXXXX 472
            KST RG+K S    ++A D S   KTS+           ++SLKQTTLDAA+ F      
Sbjct: 576  KST-RGRKVS---SRAAEDTST--KTSTRGRGRGRGRGSSSSLKQTTLDAALGF-----R 624

Query: 473  XXXXXXXXXXXXXXDEENLDSASSDEPVQYGINELHDSSDDNESIQGKGRKRAAPRG 643
                          + + ++SASS E  +  + E++DSS+++ES+  KGRKR APRG
Sbjct: 625  KSQRSATAAVQSIVNTDAMNSASSGEARENEVEEINDSSENDESLLSKGRKRTAPRG 681


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