BLASTX nr result

ID: Atractylodes22_contig00008658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008658
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519025.1| Splicing factor 3B subunit, putative [Ricinu...   187   8e-46
ref|XP_002316630.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_001785697.1| predicted protein [Physcomitrella patens sub...   184   6e-45
ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like...   183   1e-44
ref|XP_001767957.1| predicted protein [Physcomitrella patens sub...   183   1e-44

>ref|XP_002519025.1| Splicing factor 3B subunit, putative [Ricinus communis]
           gi|223541688|gb|EEF43236.1| Splicing factor 3B subunit,
           putative [Ricinus communis]
          Length = 590

 Score =  187 bits (475), Expect = 8e-46
 Identities = 85/88 (96%), Positives = 88/88 (100%)
 Frame = -3

Query: 266 KPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLREMKPGTLSQELKEAL 87
           +PKMGKMDIDYQVLHDAFFKYQTKPKLT+HGDLYHEGKEFEVKLREMKPGTLSQELKE+L
Sbjct: 271 QPKMGKMDIDYQVLHDAFFKYQTKPKLTTHGDLYHEGKEFEVKLREMKPGTLSQELKESL 330

Query: 86  GMPEGAPPPWLINMQRYGPPPSYPHLKI 3
           GMPEGAPPPWLINMQRYGPPPSYPHLKI
Sbjct: 331 GMPEGAPPPWLINMQRYGPPPSYPHLKI 358


>ref|XP_002316630.1| predicted protein [Populus trichocarpa] gi|222859695|gb|EEE97242.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score =  186 bits (472), Expect = 2e-45
 Identities = 85/88 (96%), Positives = 87/88 (98%)
 Frame = -3

Query: 266 KPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLREMKPGTLSQELKEAL 87
           +PKMGKMDIDYQVLHDAFFKYQTKPKLT HGDLYHEGKEFEVKLREMKPG+LSQELKEAL
Sbjct: 264 QPKMGKMDIDYQVLHDAFFKYQTKPKLTMHGDLYHEGKEFEVKLREMKPGSLSQELKEAL 323

Query: 86  GMPEGAPPPWLINMQRYGPPPSYPHLKI 3
           GMPEGAPPPWLINMQRYGPPPSYPHLKI
Sbjct: 324 GMPEGAPPPWLINMQRYGPPPSYPHLKI 351


>ref|XP_001785697.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162662667|gb|EDQ49492.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 588

 Score =  184 bits (467), Expect = 6e-45
 Identities = 84/88 (95%), Positives = 86/88 (97%)
 Frame = -3

Query: 266 KPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLREMKPGTLSQELKEAL 87
           +PKMGKMDIDYQVLHDAFFKYQTKPKLT HGDLYHEGKEFEVKLREMKPG LSQELKEAL
Sbjct: 265 QPKMGKMDIDYQVLHDAFFKYQTKPKLTHHGDLYHEGKEFEVKLREMKPGQLSQELKEAL 324

Query: 86  GMPEGAPPPWLINMQRYGPPPSYPHLKI 3
           GMP+GAPPPWLINMQRYGPPPSYPHLKI
Sbjct: 325 GMPDGAPPPWLINMQRYGPPPSYPHLKI 352


>ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 575

 Score =  183 bits (464), Expect = 1e-44
 Identities = 85/88 (96%), Positives = 86/88 (97%)
 Frame = -3

Query: 266 KPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLREMKPGTLSQELKEAL 87
           +PKMGKMDIDYQVLHDAFFKYQTKPKLTS GDLYHEGKEFEVKLREMKPG LSQELKEAL
Sbjct: 252 QPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYHEGKEFEVKLREMKPGMLSQELKEAL 311

Query: 86  GMPEGAPPPWLINMQRYGPPPSYPHLKI 3
           GMPEGAPPPWLINMQRYGPPPSYPHLKI
Sbjct: 312 GMPEGAPPPWLINMQRYGPPPSYPHLKI 339


>ref|XP_001767957.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162680799|gb|EDQ67232.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 691

 Score =  183 bits (464), Expect = 1e-44
 Identities = 83/88 (94%), Positives = 86/88 (97%)
 Frame = -3

Query: 266 KPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLREMKPGTLSQELKEAL 87
           +PKMGKMDIDYQVLHDAFFKYQTKPKLT HGDLYHEGKEFEVKL+EMKPG LSQELKEAL
Sbjct: 357 QPKMGKMDIDYQVLHDAFFKYQTKPKLTHHGDLYHEGKEFEVKLKEMKPGQLSQELKEAL 416

Query: 86  GMPEGAPPPWLINMQRYGPPPSYPHLKI 3
           GMP+GAPPPWLINMQRYGPPPSYPHLKI
Sbjct: 417 GMPDGAPPPWLINMQRYGPPPSYPHLKI 444


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