BLASTX nr result

ID: Atractylodes22_contig00008600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008600
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21551.3| unnamed protein product [Vitis vinifera]               58   9e-07
ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Viti...    58   9e-07
emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]    58   9e-07
ref|XP_002310314.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>emb|CBI21551.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/39 (71%), Positives = 31/39 (79%)
 Frame = -3

Query: 250 RDSAGYVYL*FENVEAVARAQQAMYKRWFARRLISVIFL 134
           + SAGYVYL FE VEA   AQ+AM+ RWFARRLIS IFL
Sbjct: 453 KHSAGYVYLRFETVEAAVTAQRAMHMRWFARRLISAIFL 491


>ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera]
          Length = 542

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/39 (71%), Positives = 31/39 (79%)
 Frame = -3

Query: 250 RDSAGYVYL*FENVEAVARAQQAMYKRWFARRLISVIFL 134
           + SAGYVYL FE VEA   AQ+AM+ RWFARRLIS IFL
Sbjct: 491 KHSAGYVYLRFETVEAAVTAQRAMHMRWFARRLISAIFL 529


>emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]
          Length = 461

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/39 (71%), Positives = 31/39 (79%)
 Frame = -3

Query: 250 RDSAGYVYL*FENVEAVARAQQAMYKRWFARRLISVIFL 134
           + SAGYVYL FE VEA   AQ+AM+ RWFARRLIS IFL
Sbjct: 410 KHSAGYVYLRFETVEAAVTAQRAMHMRWFARRLISAIFL 448


>ref|XP_002310314.1| predicted protein [Populus trichocarpa] gi|222853217|gb|EEE90764.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/42 (59%), Positives = 35/42 (83%)
 Frame = -3

Query: 250 RDSAGYVYL*FENVEAVARAQQAMYKRWFARRLISVIFLLAI 125
           ++SAG+VYL F+++EA ARAQ+AM+ RWFARR I  IF++ I
Sbjct: 343 KNSAGHVYLQFDSMEAAARAQRAMHMRWFARRSILAIFMVII 384


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