BLASTX nr result

ID: Atractylodes22_contig00008579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008579
         (1354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301066.1| predicted protein [Populus trichocarpa] gi|2...   311   2e-82
ref|XP_002269291.1| PREDICTED: F-box protein FBW2 isoform 1 [Vit...   305   2e-80
ref|XP_002513950.1| ubiquitin-protein ligase, putative [Ricinus ...   290   5e-76
ref|XP_003522785.1| PREDICTED: F-box protein FBW2-like isoform 1...   289   1e-75
ref|XP_004136279.1| PREDICTED: F-box protein FBW2-like [Cucumis ...   283   7e-74

>ref|XP_002301066.1| predicted protein [Populus trichocarpa] gi|222842792|gb|EEE80339.1|
            predicted protein [Populus trichocarpa]
          Length = 321

 Score =  311 bits (798), Expect = 2e-82
 Identities = 147/248 (59%), Positives = 192/248 (77%)
 Frame = +3

Query: 291  GVDSRNWADLLPDALGLIFSNLSLQETLTIVPRVCKSWNHIVLGPYCWQKVNILDWSYRS 470
            G + R W +L+PDALGLIF NLSLQE LT+VPRVCKSW+  V GPYCWQ++NI +WS R 
Sbjct: 4    GDEYRRWDELIPDALGLIFRNLSLQEILTMVPRVCKSWSRAVSGPYCWQEINIEEWSTRC 63

Query: 471  NPDHIDHMLRLLVTRSGGALREITVSGILNDLTFSFLADHARSLQILQIPRCNFSDSIVE 650
            +PDH+D ML++L+TRS G+LR++ VSG+ ND  FSFLADHA SLQ L+IPR +  DSIVE
Sbjct: 64   HPDHLDRMLQMLITRSCGSLRKLCVSGLHNDTNFSFLADHAGSLQTLRIPRSDIGDSIVE 123

Query: 651  QVSTKLSTVTFMDLSYCCKISARALSAIGKSCTRLVGFRRNMHPIDLKERRPQAEEAVAI 830
            Q++ +LSTVTF+D+SYC KIS RAL AIGK C  LVG  RNMHP+D +    Q +EA AI
Sbjct: 124  QIAGRLSTVTFLDVSYCNKISGRALEAIGKHCKLLVGLCRNMHPLDTEGLEAQDDEAYAI 183

Query: 831  AATMPKLKHLEMAYNCIDTKSVVEIIERCKNLEFLDVRGCWDVKLDQDWLEKRALTVKVL 1010
            A TMPKLK LEMAY+ + T+S+++I+  C NLEF+D+RGCW+V LD  + +++   + VL
Sbjct: 184  ATTMPKLKRLEMAYHLVSTESLLQILSSCTNLEFMDLRGCWNVNLDNKFFKEKFQKLTVL 243

Query: 1011 GPHVVDQF 1034
            GP V++ +
Sbjct: 244  GPLVMEDY 251


>ref|XP_002269291.1| PREDICTED: F-box protein FBW2 isoform 1 [Vitis vinifera]
            gi|359496684|ref|XP_003635300.1| PREDICTED: F-box protein
            FBW2 isoform 2 [Vitis vinifera]
            gi|296085646|emb|CBI29445.3| unnamed protein product
            [Vitis vinifera]
          Length = 317

 Score =  305 bits (781), Expect = 2e-80
 Identities = 144/251 (57%), Positives = 198/251 (78%)
 Frame = +3

Query: 291  GVDSRNWADLLPDALGLIFSNLSLQETLTIVPRVCKSWNHIVLGPYCWQKVNILDWSYRS 470
            G + R+W +L+PDALGLIFSNLSLQE LT++PRVCKSW   V+GPYCWQ+++I++WS RS
Sbjct: 4    GCEFRSWDELIPDALGLIFSNLSLQEILTVIPRVCKSWRKTVMGPYCWQEIDIVEWSQRS 63

Query: 471  NPDHIDHMLRLLVTRSGGALREITVSGILNDLTFSFLADHARSLQILQIPRCNFSDSIVE 650
            +P+++D ML +L+TRS G+ R++ VSG+  D +FSF+ADHA+SLQ L++PR   SD IVE
Sbjct: 64   SPENLDRMLEMLMTRSAGSHRKLCVSGLPTDASFSFVADHAKSLQTLRLPRSEISDPIVE 123

Query: 651  QVSTKLSTVTFMDLSYCCKISARALSAIGKSCTRLVGFRRNMHPIDLKERRPQAEEAVAI 830
            +V+ KLST+TF+D+SYC K+ A AL AIGK C  L G RR MHP+++ ++  Q +EA+AI
Sbjct: 124  EVAWKLSTITFLDVSYCRKMGAPALEAIGKHCKFLTGLRRIMHPLEIIDKLTQDDEALAI 183

Query: 831  AATMPKLKHLEMAYNCIDTKSVVEIIERCKNLEFLDVRGCWDVKLDQDWLEKRALTVKVL 1010
            AATMPKLKHLE+AY  + T+ V++I+  C  LE LDVRGCW+VKLD+  L K+   +KV+
Sbjct: 184  AATMPKLKHLEIAYLLVSTEPVLKILASCCELELLDVRGCWNVKLDEK-LIKKFSGLKVV 242

Query: 1011 GPHVVDQFEGH 1043
            GP V+D +EG+
Sbjct: 243  GPLVIDCYEGN 253


>ref|XP_002513950.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223547036|gb|EEF48533.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 329

 Score =  290 bits (743), Expect = 5e-76
 Identities = 141/250 (56%), Positives = 191/250 (76%), Gaps = 1/250 (0%)
 Frame = +3

Query: 291  GVDSRNWADLLPDALGLIFSNLSLQETLTIVPRVCKSWNHIVLGPYCWQKVNILDWSYRS 470
            G + R W +L+PDALGLIF NLSLQE LT+VPRVCKSWN  V GPYCWQ+++I +WS + 
Sbjct: 4    GSEYRCWDELIPDALGLIFRNLSLQEILTVVPRVCKSWNRAVSGPYCWQEIDIEEWSNKR 63

Query: 471  NPDHIDHMLRLLVTRSGGALREITVSGILNDLTFSFLADHARSLQILQIPRCNFSDSIVE 650
             P HID MLR+L+ RS G+LR++ VSGI +D  F FLADHA SLQ L+ PR   SDSIVE
Sbjct: 64   QPHHIDRMLRMLIARSCGSLRKLCVSGIPSDAIFPFLADHAGSLQTLRTPRSEISDSIVE 123

Query: 651  QVSTKLSTVTFMDLSYCCKISARALSAIGKSCTRLVGFRRNMHPIDLKERRPQAEEAVAI 830
            Q++ +LST+TF+D+S+C +ISARAL AIGK+C  L G  RN+       +  Q +EA AI
Sbjct: 124  QIAGRLSTITFLDVSHCNEISARALEAIGKNCKLLSGLCRNVELSSSANQLLQDDEAQAI 183

Query: 831  AATMPKLKHLEMAYN-CIDTKSVVEIIERCKNLEFLDVRGCWDVKLDQDWLEKRALTVKV 1007
            A+TMPKLKHLE+AY+  I+T+SV++I+  C  LEFL++ GCWDVK D+++L+++   +KV
Sbjct: 184  ASTMPKLKHLEVAYHLLINTESVLKILSSCPELEFLNLTGCWDVKFDRNFLQEKFPKLKV 243

Query: 1008 LGPHVVDQFE 1037
            +GPH++D ++
Sbjct: 244  VGPHLLDYYD 253


>ref|XP_003522785.1| PREDICTED: F-box protein FBW2-like isoform 1 [Glycine max]
            gi|356508075|ref|XP_003522786.1| PREDICTED: F-box protein
            FBW2-like isoform 2 [Glycine max]
          Length = 321

 Score =  289 bits (740), Expect = 1e-75
 Identities = 133/245 (54%), Positives = 186/245 (75%)
 Frame = +3

Query: 303  RNWADLLPDALGLIFSNLSLQETLTIVPRVCKSWNHIVLGPYCWQKVNILDWSYRSNPDH 482
            R+WA+L+PDALG+IF+NLSLQE +T++PRVCKSW + V GPYCWQ+++I DWS R  PD 
Sbjct: 8    RSWAELIPDALGVIFTNLSLQERVTVIPRVCKSWANAVTGPYCWQEIDIKDWSNRCQPDQ 67

Query: 483  IDHMLRLLVTRSGGALREITVSGILNDLTFSFLADHARSLQILQIPRCNFSDSIVEQVST 662
            +D +L +L+TRS G+LR+++VSG+  +  F+F+A++A SL  L++PR + +DSIVEQ++ 
Sbjct: 68   LDRLLEMLITRSSGSLRKLSVSGLQTESIFTFIAENACSLHTLRLPRSSMNDSIVEQIAG 127

Query: 663  KLSTVTFMDLSYCCKISARALSAIGKSCTRLVGFRRNMHPIDLKERRPQAEEAVAIAATM 842
            +LS ++F+D+SYC KI   AL  IGK+C  L G  RNMHP+D   +  Q +EA AIA+TM
Sbjct: 128  RLSMISFLDVSYCIKIGPYALEMIGKNCKLLEGLCRNMHPLDTASKPFQDDEAYAIASTM 187

Query: 843  PKLKHLEMAYNCIDTKSVVEIIERCKNLEFLDVRGCWDVKLDQDWLEKRALTVKVLGPHV 1022
            PKLKHLEMAY+ I T  V++I+  C  LEFLD RGCW V LD  +L+++   +KVLGP V
Sbjct: 188  PKLKHLEMAYHLISTSGVLQILANCPKLEFLDQRGCWGVTLDHMFLKQKFPKLKVLGPFV 247

Query: 1023 VDQFE 1037
            +D +E
Sbjct: 248  LDTYE 252


>ref|XP_004136279.1| PREDICTED: F-box protein FBW2-like [Cucumis sativus]
            gi|449524052|ref|XP_004169037.1| PREDICTED: F-box protein
            FBW2-like isoform 1 [Cucumis sativus]
            gi|449524054|ref|XP_004169038.1| PREDICTED: F-box protein
            FBW2-like isoform 2 [Cucumis sativus]
            gi|449524056|ref|XP_004169039.1| PREDICTED: F-box protein
            FBW2-like isoform 3 [Cucumis sativus]
          Length = 318

 Score =  283 bits (724), Expect = 7e-74
 Identities = 136/249 (54%), Positives = 184/249 (73%)
 Frame = +3

Query: 291  GVDSRNWADLLPDALGLIFSNLSLQETLTIVPRVCKSWNHIVLGPYCWQKVNILDWSYRS 470
            G D R+W +L+PDALGLIFS LSLQE LT++PRVCKSW   VLGPYCWQ+++I +WS + 
Sbjct: 4    GNDLRHWDELIPDALGLIFSKLSLQEKLTVIPRVCKSWAKAVLGPYCWQEIDIEEWSSQR 63

Query: 471  NPDHIDHMLRLLVTRSGGALREITVSGILNDLTFSFLADHARSLQILQIPRCNFSDSIVE 650
              D++D ML++L+ RSGG+LR++ V+G+ N   F  +ADHA SLQ L++PR N SD++ E
Sbjct: 64   QLDNVDRMLQMLINRSGGSLRKLCVTGLHNSSIFFSIADHAGSLQTLRLPRSNISDAVAE 123

Query: 651  QVSTKLSTVTFMDLSYCCKISARALSAIGKSCTRLVGFRRNMHPIDLKERRPQAEEAVAI 830
            Q++ +L  VTF+DLSYC KISA  L +IGK+C  LVG  RN+HP+         +EA  I
Sbjct: 124  QIAGRLCAVTFLDLSYCDKISACGLESIGKNCKALVGMCRNLHPLHTAGISSPDDEAYTI 183

Query: 831  AATMPKLKHLEMAYNCIDTKSVVEIIERCKNLEFLDVRGCWDVKLDQDWLEKRALTVKVL 1010
            AATMPKLKHLEMAY+ + TKS++ I+  C +LEFLD+RGC DV+LD  +L ++   ++VL
Sbjct: 184  AATMPKLKHLEMAYHPLSTKSLLTILSSCPDLEFLDLRGCGDVRLDDKFLAEKFPKLRVL 243

Query: 1011 GPHVVDQFE 1037
            GP V D +E
Sbjct: 244  GPLVRDVYE 252


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