BLASTX nr result

ID: Atractylodes22_contig00008555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008555
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271734.1| PREDICTED: LEC14B homolog [Vitis vinifera]         73   8e-11
ref|XP_002872801.1| transducin family protein [Arabidopsis lyrat...    66   1e-08
ref|NP_192211.2| transducin/WD40 domain-containing protein [Arab...    65   2e-08
gb|AAC79104.1| putative WD-repeat protein [Arabidopsis thaliana]...    65   2e-08
ref|XP_002320381.1| predicted protein [Populus trichocarpa] gi|2...    61   2e-07

>ref|XP_002271734.1| PREDICTED: LEC14B homolog [Vitis vinifera]
          Length = 486

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 50/126 (39%), Positives = 67/126 (53%), Gaps = 12/126 (9%)
 Frame = -2

Query: 563 IDPDFSDSGSSPVGDDNHSPRPWSLNDLEHEVAQLTKLSSEPHDRLKH--RGHQ*RC*LF 390
           +D DF D+G    G+DN       LN L+HE++QLTKL S PH+ L     G +      
Sbjct: 22  LDSDFCDAGKDIHGNDNTERLNKELNHLDHEISQLTKLRSGPHECLSQIIPGKRDSPVST 81

Query: 389 EKGIILVEGG----------SLQHMVAIF*INSCLLKGPSMVDQLTTRAYISQFSTDGSL 240
            K +   EG              HM++ +      + GP +VDQ+T+RAY+SQFS DGSL
Sbjct: 82  VKMLAGREGNYSGRGRFSSADCCHMLSRY----LPVNGPWLVDQMTSRAYVSQFSADGSL 137

Query: 239 FVAAFQ 222
           FVA FQ
Sbjct: 138 FVAGFQ 143


>ref|XP_002872801.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318638|gb|EFH49060.1| transducin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 493

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 49/133 (36%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
 Frame = -2

Query: 563 IDPDFSDSGSS--PVGDDNHSPRPWS-LNDLEHEVAQLTKLSSEPHDRLKHR---GHQ*R 402
           I+ D  D+G     VG  + S R    L DL+HE++Q+TKL S PH R        HQ  
Sbjct: 22  IESDLCDTGKDFCGVGSSSASHRSSEHLADLDHEISQVTKLKSSPHQRYSREVPGRHQ-- 79

Query: 401 C*LFEKGIILVEGGSLQ-------------HMVAIF*INSCLLKGPSMVDQLTTRAYISQ 261
             L    + ++ G                 HM++ +      +KGP +VDQ+ +RAY+SQ
Sbjct: 80  --LPVSTVRMLAGRESNFSGRGRFSAADCCHMLSRY----LPIKGPWLVDQMDSRAYVSQ 133

Query: 260 FSTDGSLFVAAFQ 222
           FSTDGSLF+A FQ
Sbjct: 134 FSTDGSLFIAGFQ 146


>ref|NP_192211.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|334186335|ref|NP_001190666.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
           gi|20466538|gb|AAM20586.1| putative WD-repeat protein
           [Arabidopsis thaliana] gi|23198298|gb|AAN15676.1|
           putative WD-repeat protein [Arabidopsis thaliana]
           gi|332656861|gb|AEE82261.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
           gi|332656862|gb|AEE82262.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 493

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 48/133 (36%), Positives = 66/133 (49%), Gaps = 19/133 (14%)
 Frame = -2

Query: 563 IDPDFSDSGSSPVGDDNHSPRPWS---LNDLEHEVAQLTKLSSEPHDRLKHR---GHQ*R 402
           I+ D  D+G    G  + S    S   L DL+HE++Q+TKL S PH R        HQ  
Sbjct: 22  IESDLCDTGKDVCGVGSSSGSHRSSEHLADLDHEISQVTKLKSSPHQRYSREVPGRHQ-- 79

Query: 401 C*LFEKGIILVEGGSLQ-------------HMVAIF*INSCLLKGPSMVDQLTTRAYISQ 261
             L    + ++ G                 HM++ +       KGP +VDQ+ +RAY+SQ
Sbjct: 80  --LPVSTVRMLAGRESNFSGRGRFSAADCCHMLSRY----LPTKGPWLVDQMDSRAYVSQ 133

Query: 260 FSTDGSLFVAAFQ 222
           FSTDGSLF+A FQ
Sbjct: 134 FSTDGSLFIAGFQ 146


>gb|AAC79104.1| putative WD-repeat protein [Arabidopsis thaliana]
           gi|7269787|emb|CAB77787.1| putative WD-repeat protein
           [Arabidopsis thaliana]
          Length = 555

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 48/133 (36%), Positives = 66/133 (49%), Gaps = 19/133 (14%)
 Frame = -2

Query: 563 IDPDFSDSGSSPVGDDNHSPRPWS---LNDLEHEVAQLTKLSSEPHDRLKHR---GHQ*R 402
           I+ D  D+G    G  + S    S   L DL+HE++Q+TKL S PH R        HQ  
Sbjct: 84  IESDLCDTGKDVCGVGSSSGSHRSSEHLADLDHEISQVTKLKSSPHQRYSREVPGRHQ-- 141

Query: 401 C*LFEKGIILVEGGSLQ-------------HMVAIF*INSCLLKGPSMVDQLTTRAYISQ 261
             L    + ++ G                 HM++ +       KGP +VDQ+ +RAY+SQ
Sbjct: 142 --LPVSTVRMLAGRESNFSGRGRFSAADCCHMLSRY----LPTKGPWLVDQMDSRAYVSQ 195

Query: 260 FSTDGSLFVAAFQ 222
           FSTDGSLF+A FQ
Sbjct: 196 FSTDGSLFIAGFQ 208


>ref|XP_002320381.1| predicted protein [Populus trichocarpa] gi|222861154|gb|EEE98696.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 13/126 (10%)
 Frame = -2

Query: 560 DPDFSDSGSS-PVGDDNHSPRPWSLNDLEHEVAQLTKLSSEPHDRLKHR--GHQ*RC*LF 390
           + +  D G + P    +     W LN+L+HE+AQ+TKL S PH +L     G        
Sbjct: 23  ESELCDGGKTIPEAGSSKRASNW-LNNLDHEIAQVTKLKSSPHKQLAELVPGMHKSSVST 81

Query: 389 EKGIILVEGGSLQ----------HMVAIF*INSCLLKGPSMVDQLTTRAYISQFSTDGSL 240
            K ++  E               HM++ +      + GP +VDQ++TRAY+SQFS DGSL
Sbjct: 82  VKMLVGREANYSARGRFSAADRCHMLSRY----LPVNGPWLVDQMSTRAYVSQFSADGSL 137

Query: 239 FVAAFQ 222
           FVA FQ
Sbjct: 138 FVAGFQ 143


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