BLASTX nr result

ID: Atractylodes22_contig00008519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008519
         (851 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36876.3| unnamed protein product [Vitis vinifera]              331   1e-88
ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotei...   331   1e-88
emb|CAA90282.1| U1snRNP-specific protein, U1A [Solanum tuberosum]     328   7e-88
ref|XP_002302719.1| predicted protein [Populus trichocarpa] gi|2...   320   3e-85
gb|AFK36658.1| unknown [Medicago truncatula]                          320   3e-85

>emb|CBI36876.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  331 bits (848), Expect = 1e-88
 Identities = 169/225 (75%), Positives = 185/225 (82%), Gaps = 1/225 (0%)
 Frame = -3

Query: 849 LNEKTKLDELKKSLQAVFSQFGKILEILAFKTLKHKGQAWVVFEDVSSATSALKQMQGFP 670
           LNEK KL+ELKKSL AVFSQFGKI+E+LAFKTLKHKGQAWVVFE+VSSAT+AL+QMQGFP
Sbjct: 8   LNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSSATNALRQMQGFP 67

Query: 669 FYDKPMRIQYAKTKSDVIAKSDGTFVPXXXXXXXXXXXXXXXG-QHDANQAAVGVNPSXX 493
           FYDKPMRIQYAKTKSDVIAK+DGTFVP                 QHDANQA VGVNP+  
Sbjct: 68  FYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAGRKRREQHDANQAGVGVNPAYG 127

Query: 492 XXXXXXXPLSQIPYMGGAKSGIPEAPAPPNNILFIQNLPHQTSSMMLQMLFGQHQGFKEV 313
                  PLSQIPY+GGAKS +PEAPAPPNNILFIQNLPH+ + MMLQM F Q+ GFKEV
Sbjct: 128 GAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFCQYPGFKEV 187

Query: 312 RMVEAKPGIAFIEYGDEMQATVAMHSLQGFKINPDSPMLITYAKK 178
           RMVEAKPGIAF+EYGDEMQ+TVAM  LQG KIN  +PMLITYAKK
Sbjct: 188 RMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAKK 232


>ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
          Length = 245

 Score =  331 bits (848), Expect = 1e-88
 Identities = 169/225 (75%), Positives = 185/225 (82%), Gaps = 1/225 (0%)
 Frame = -3

Query: 849 LNEKTKLDELKKSLQAVFSQFGKILEILAFKTLKHKGQAWVVFEDVSSATSALKQMQGFP 670
           LNEK KL+ELKKSL AVFSQFGKI+E+LAFKTLKHKGQAWVVFE+VSSAT+AL+QMQGFP
Sbjct: 21  LNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSSATNALRQMQGFP 80

Query: 669 FYDKPMRIQYAKTKSDVIAKSDGTFVPXXXXXXXXXXXXXXXG-QHDANQAAVGVNPSXX 493
           FYDKPMRIQYAKTKSDVIAK+DGTFVP                 QHDANQA VGVNP+  
Sbjct: 81  FYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAGRKRREQHDANQAGVGVNPAYG 140

Query: 492 XXXXXXXPLSQIPYMGGAKSGIPEAPAPPNNILFIQNLPHQTSSMMLQMLFGQHQGFKEV 313
                  PLSQIPY+GGAKS +PEAPAPPNNILFIQNLPH+ + MMLQM F Q+ GFKEV
Sbjct: 141 GAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFCQYPGFKEV 200

Query: 312 RMVEAKPGIAFIEYGDEMQATVAMHSLQGFKINPDSPMLITYAKK 178
           RMVEAKPGIAF+EYGDEMQ+TVAM  LQG KIN  +PMLITYAKK
Sbjct: 201 RMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAKK 245


>emb|CAA90282.1| U1snRNP-specific protein, U1A [Solanum tuberosum]
          Length = 253

 Score =  328 bits (842), Expect = 7e-88
 Identities = 162/224 (72%), Positives = 187/224 (83%)
 Frame = -3

Query: 849 LNEKTKLDELKKSLQAVFSQFGKILEILAFKTLKHKGQAWVVFEDVSSATSALKQMQGFP 670
           LNEK KL+ELKKS+ AVFSQFGKILE+LAFKTLKHKGQAWVVFE+VSSA++AL+QMQGFP
Sbjct: 30  LNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQAWVVFEEVSSASNALRQMQGFP 89

Query: 669 FYDKPMRIQYAKTKSDVIAKSDGTFVPXXXXXXXXXXXXXXXGQHDANQAAVGVNPSXXX 490
           FYDKPMRIQYAKTKSDV+AK+DGTFVP                Q D+NQA +G+NP+   
Sbjct: 90  FYDKPMRIQYAKTKSDVVAKADGTFVPREKRKRHEDKGRKKKDQQDSNQAGMGLNPAYAG 149

Query: 489 XXXXXXPLSQIPYMGGAKSGIPEAPAPPNNILFIQNLPHQTSSMMLQMLFGQHQGFKEVR 310
                 P SQIPYMGGAK+ +PEAPAPPN+ILF+QNLPHQ++ MMLQMLF Q+ GFKEVR
Sbjct: 150 AYGAAPPFSQIPYMGGAKAAVPEAPAPPNSILFVQNLPHQSTPMMLQMLFCQYPGFKEVR 209

Query: 309 MVEAKPGIAFIEYGDEMQATVAMHSLQGFKINPDSPMLITYAKK 178
           M+EAKPGIAFIEYGDEMQ+TVAM +LQGFKI  ++PMLITYAKK
Sbjct: 210 MIEAKPGIAFIEYGDEMQSTVAMQALQGFKITAENPMLITYAKK 253


>ref|XP_002302719.1| predicted protein [Populus trichocarpa] gi|222844445|gb|EEE81992.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  320 bits (820), Expect = 3e-85
 Identities = 160/224 (71%), Positives = 183/224 (81%)
 Frame = -3

Query: 849 LNEKTKLDELKKSLQAVFSQFGKILEILAFKTLKHKGQAWVVFEDVSSATSALKQMQGFP 670
           LNEK K+DELKK+L AVFSQFGKILEILAFKTLKHKGQAWVVFEDV SA++A++QMQ FP
Sbjct: 29  LNEKIKIDELKKALHAVFSQFGKILEILAFKTLKHKGQAWVVFEDVQSASNAMRQMQSFP 88

Query: 669 FYDKPMRIQYAKTKSDVIAKSDGTFVPXXXXXXXXXXXXXXXGQHDANQAAVGVNPSXXX 490
           FYDKPMRIQYAKTKSD++AK+DGTFVP                QHD NQ  VG+ P+   
Sbjct: 89  FYDKPMRIQYAKTKSDIVAKADGTFVPREKRRRHEEKGKKKKDQHDTNQVGVGLTPAYGG 148

Query: 489 XXXXXXPLSQIPYMGGAKSGIPEAPAPPNNILFIQNLPHQTSSMMLQMLFGQHQGFKEVR 310
                 PLSQIPY+GG KS +PEAPAPPNNILFIQNLP++T++MMLQMLF Q+ GFKEVR
Sbjct: 149 AYGTTPPLSQIPYLGGVKSMVPEAPAPPNNILFIQNLPNETTTMMLQMLFQQYAGFKEVR 208

Query: 309 MVEAKPGIAFIEYGDEMQATVAMHSLQGFKINPDSPMLITYAKK 178
           MVE KPGIAF+EYGDEMQ+TVAMH+LQGFK+  +S MLITYAKK
Sbjct: 209 MVETKPGIAFVEYGDEMQSTVAMHALQGFKLQQNS-MLITYAKK 251


>gb|AFK36658.1| unknown [Medicago truncatula]
          Length = 232

 Score =  320 bits (819), Expect = 3e-85
 Identities = 162/225 (72%), Positives = 185/225 (82%), Gaps = 1/225 (0%)
 Frame = -3

Query: 849 LNEKTKLDELKKSLQAVFSQFGKILEILAFKTLKHKGQAWVVFEDVSSATSALKQMQGFP 670
           LNEK K+DELKKSL AVFSQFGKILE+LAFKTLKHKGQAWV+FEDV+SA++AL+QMQGFP
Sbjct: 8   LNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVTSASNALRQMQGFP 67

Query: 669 FYDKPMRIQYAKTKSDVIAKSDGTFVPXXXXXXXXXXXXXXXG-QHDANQAAVGVNPSXX 493
           FYDKPMRIQYA+TKSDVIAK++GTFVP                 Q+DAN A  G+NP+  
Sbjct: 68  FYDKPMRIQYARTKSDVIAKAEGTFVPREKRKRHDDKAGKKRKDQNDANLAGTGLNPAYA 127

Query: 492 XXXXXXXPLSQIPYMGGAKSGIPEAPAPPNNILFIQNLPHQTSSMMLQMLFGQHQGFKEV 313
                   LSQIPY GGAKS +PEAPAPPNNILFIQNLP++T+ MMLQMLF Q+ GFKEV
Sbjct: 128 GAYGATPALSQIPYPGGAKSLLPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEV 187

Query: 312 RMVEAKPGIAFIEYGDEMQATVAMHSLQGFKINPDSPMLITYAKK 178
           RMVEAKPGIAF+EYGDEMQ+T+AM +LQGFKI P +PMLITYAKK
Sbjct: 188 RMVEAKPGIAFVEYGDEMQSTMAMQALQGFKIAPQNPMLITYAKK 232


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