BLASTX nr result

ID: Atractylodes22_contig00008510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008510
         (1401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268541.2| PREDICTED: ribosome production factor 1-like...   518   e-144
ref|XP_003633697.1| PREDICTED: uncharacterized protein LOC100263...   517   e-144
emb|CBI22317.3| unnamed protein product [Vitis vinifera]              516   e-144
ref|XP_002302686.1| predicted protein [Populus trichocarpa] gi|2...   511   e-142
ref|XP_003548006.1| PREDICTED: LOW QUALITY PROTEIN: ribosome pro...   510   e-142

>ref|XP_002268541.2| PREDICTED: ribosome production factor 1-like [Vitis vinifera]
          Length = 346

 Score =  518 bits (1334), Expect = e-144
 Identities = 262/359 (72%), Positives = 288/359 (80%), Gaps = 1/359 (0%)
 Frame = -3

Query: 1300 MGKKRKDREVPSDDDDAVRTRTKRTDIDKSGGKPQLLPSMIKNKEKRSAVYXXXXXXXXX 1121
            MG KRK  E    DD+              GGK Q+LPSMIKNKEKRSAV+         
Sbjct: 1    MGAKRKKTEEVGGDDEV------------GGGKKQILPSMIKNKEKRSAVHAKLKHQKKI 48

Query: 1120 XXXXXXXXXXXXESRALELGEELPPKKIPRTIENTRDADETICKPDDEELFAGNDADEFS 941
                        E RALELGEE P KKIP TIENTR+ DET+CKPDDEELFAGNDADEFS
Sbjct: 49   EKRKKAKAREAAEKRALELGEEPPAKKIPHTIENTREFDETVCKPDDEELFAGNDADEFS 108

Query: 940  SIFNSERPPKILITTCRFHSTRGPALIKDLIAVIPNAEYYKRGTYDLKKIVEYANNKEFT 761
            SI N +  PKILITTCRF+STRGPA I +L++VIPNA YYKRGTYDLKKIVEYA  K+FT
Sbjct: 109  SILNRKSDPKILITTCRFNSTRGPAFISELLSVIPNAHYYKRGTYDLKKIVEYAKKKDFT 168

Query: 760  SVIVVHTSRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTSHKPELVMNNFTTR 581
            S+IVVHT+RREPDALLIIGLP+GPTAHFKLS LVLRKD+KNHGNPTSH PELV+NNFTTR
Sbjct: 169  SLIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDVKNHGNPTSHIPELVLNNFTTR 228

Query: 580  LGHRVGRLIQSLFPQDPEFRGRRVVTFHNQRDFIFFRHHRYIFETKENKQNDAK-EKNKD 404
            LGHR+GR+IQSLFPQ P F GRRVVTFHNQRDFIFFRHHRYIFE+KE+KQ D+K  K+KD
Sbjct: 229  LGHRIGRMIQSLFPQAPNFGGRRVVTFHNQRDFIFFRHHRYIFESKESKQGDSKGNKDKD 288

Query: 403  TGEQKVAPKGKVIARLQECGPRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 227
               +K + +GKV+ARLQECGPRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 289  AKGEK-SSRGKVVARLQECGPRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 346


>ref|XP_003633697.1| PREDICTED: uncharacterized protein LOC100263155 [Vitis vinifera]
          Length = 801

 Score =  517 bits (1332), Expect = e-144
 Identities = 262/362 (72%), Positives = 290/362 (80%), Gaps = 1/362 (0%)
 Frame = -3

Query: 1309 KREMGKKRKDREVPSDDDDAVRTRTKRTDIDKSGGKPQLLPSMIKNKEKRSAVYXXXXXX 1130
            K  MG KRK RE    DD+             +GGK Q+LPSMIKNK+KRSAV+      
Sbjct: 453  KSVMGAKRKKREEVGGDDEV------------AGGKKQILPSMIKNKDKRSAVHAKLKHQ 500

Query: 1129 XXXXXXXXXXXXXXXESRALELGEELPPKKIPRTIENTRDADETICKPDDEELFAGNDAD 950
                           E RALELGEE P K IPRTIENTR+ DET+CKPDDEELFAGNDAD
Sbjct: 501  KKIEKRKKAKAREAAEKRALELGEEPPVKAIPRTIENTREFDETVCKPDDEELFAGNDAD 560

Query: 949  EFSSIFNSERPPKILITTCRFHSTRGPALIKDLIAVIPNAEYYKRGTYDLKKIVEYANNK 770
            EFSSI N +  PKILITTCRF+STRGPA I +L++VIPNA YYKRGTYDLKKIVEYA  K
Sbjct: 561  EFSSILNRKSDPKILITTCRFNSTRGPAFISELLSVIPNAHYYKRGTYDLKKIVEYAKIK 620

Query: 769  EFTSVIVVHTSRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTSHKPELVMNNF 590
            +FTS+IVVHT+RREPDALLIIGLP+GPTAHFKLS LVL KD+KNHGNPTSH PELV+NNF
Sbjct: 621  DFTSLIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLHKDVKNHGNPTSHIPELVLNNF 680

Query: 589  TTRLGHRVGRLIQSLFPQDPEFRGRRVVTFHNQRDFIFFRHHRYIFETKENKQNDAK-EK 413
            TTRLGHR+GR+IQSLFPQ P FRGRRVVTFHNQRDFIFFRHHRYIFE+KE+KQ D K  K
Sbjct: 681  TTRLGHRIGRMIQSLFPQAPNFRGRRVVTFHNQRDFIFFRHHRYIFESKESKQGDTKGNK 740

Query: 412  NKDTGEQKVAPKGKVIARLQECGPRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTSRRRF 233
            +KD   +K + +GKV+ARLQECGPRFTLKL +LQHGTFDTKGGEYEWVHKPEMDTSRRRF
Sbjct: 741  DKDAKGEK-SSQGKVVARLQECGPRFTLKLINLQHGTFDTKGGEYEWVHKPEMDTSRRRF 799

Query: 232  FL 227
            FL
Sbjct: 800  FL 801


>emb|CBI22317.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  516 bits (1330), Expect = e-144
 Identities = 261/359 (72%), Positives = 289/359 (80%), Gaps = 1/359 (0%)
 Frame = -3

Query: 1300 MGKKRKDREVPSDDDDAVRTRTKRTDIDKSGGKPQLLPSMIKNKEKRSAVYXXXXXXXXX 1121
            MG KRK RE    DD+             +GGK Q+LPSMIKNK+KRSAV+         
Sbjct: 1    MGAKRKKREEVGGDDEV------------AGGKKQILPSMIKNKDKRSAVHAKLKHQKKI 48

Query: 1120 XXXXXXXXXXXXESRALELGEELPPKKIPRTIENTRDADETICKPDDEELFAGNDADEFS 941
                        E RALELGEE P K IPRTIENTR+ DET+CKPDDEELFAGNDADEFS
Sbjct: 49   EKRKKAKAREAAEKRALELGEEPPVKAIPRTIENTREFDETVCKPDDEELFAGNDADEFS 108

Query: 940  SIFNSERPPKILITTCRFHSTRGPALIKDLIAVIPNAEYYKRGTYDLKKIVEYANNKEFT 761
            SI N +  PKILITTCRF+STRGPA I +L++VIPNA YYKRGTYDLKKIVEYA  K+FT
Sbjct: 109  SILNRKSDPKILITTCRFNSTRGPAFISELLSVIPNAHYYKRGTYDLKKIVEYAKIKDFT 168

Query: 760  SVIVVHTSRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTSHKPELVMNNFTTR 581
            S+IVVHT+RREPDALLIIGLP+GPTAHFKLS LVL KD+KNHGNPTSH PELV+NNFTTR
Sbjct: 169  SLIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLHKDVKNHGNPTSHIPELVLNNFTTR 228

Query: 580  LGHRVGRLIQSLFPQDPEFRGRRVVTFHNQRDFIFFRHHRYIFETKENKQNDAK-EKNKD 404
            LGHR+GR+IQSLFPQ P FRGRRVVTFHNQRDFIFFRHHRYIFE+KE+KQ D K  K+KD
Sbjct: 229  LGHRIGRMIQSLFPQAPNFRGRRVVTFHNQRDFIFFRHHRYIFESKESKQGDTKGNKDKD 288

Query: 403  TGEQKVAPKGKVIARLQECGPRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 227
               +K + +GKV+ARLQECGPRFTLKL +LQHGTFDTKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 289  AKGEK-SSQGKVVARLQECGPRFTLKLINLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 346


>ref|XP_002302686.1| predicted protein [Populus trichocarpa] gi|222844412|gb|EEE81959.1|
            predicted protein [Populus trichocarpa]
          Length = 361

 Score =  511 bits (1316), Expect = e-142
 Identities = 257/361 (71%), Positives = 289/361 (80%), Gaps = 3/361 (0%)
 Frame = -3

Query: 1300 MGKKRKDREVPSDDD---DAVRTRTKRTDIDKSGGKPQLLPSMIKNKEKRSAVYXXXXXX 1130
            MG KR+  E  + ++   D    R ++    + G   ++LPSMIKNKEKRSAV+      
Sbjct: 1    MGGKRRTSESEAMEEYGSDVELDRKEKKKKMEKGKTREILPSMIKNKEKRSAVHAKLKHE 60

Query: 1129 XXXXXXXXXXXXXXXESRALELGEELPPKKIPRTIENTRDADETICKPDDEELFAGNDAD 950
                           E RALELGEE PP+KIPRTIENTR+ DET+CKPDDEELFAGNDAD
Sbjct: 61   KKVEKRKKLKARDAEEKRALELGEEPPPRKIPRTIENTRENDETVCKPDDEELFAGNDAD 120

Query: 949  EFSSIFNSERPPKILITTCRFHSTRGPALIKDLIAVIPNAEYYKRGTYDLKKIVEYANNK 770
            EFSSI   ER PKILITT RF+STRGPA I +L+ VIPNA YYKRGTYDLKKIVEYA  +
Sbjct: 121  EFSSILKRERTPKILITTSRFNSTRGPAFISELLQVIPNAHYYKRGTYDLKKIVEYAKKQ 180

Query: 769  EFTSVIVVHTSRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTSHKPELVMNNF 590
            +FTS+IVVHT+RREPDALLIIGLP+GPTAHFKLS LVLRKDIKNHGNPTSH+PELV+ NF
Sbjct: 181  DFTSLIVVHTNRREPDALLIIGLPDGPTAHFKLSRLVLRKDIKNHGNPTSHEPELVLTNF 240

Query: 589  TTRLGHRVGRLIQSLFPQDPEFRGRRVVTFHNQRDFIFFRHHRYIFETKENKQNDAKEKN 410
            TTRLGHR GR+IQSLFPQ+P FRGRRVVTFHNQRD+IFFRHHRYIFETKE+KQ+D+K K 
Sbjct: 241  TTRLGHRAGRIIQSLFPQEPNFRGRRVVTFHNQRDYIFFRHHRYIFETKESKQSDSKGKK 300

Query: 409  KDTGEQKVAPKGKVIARLQECGPRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTSRRRFF 230
               G+ +   + KVIARLQECGPRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTSRRRFF
Sbjct: 301  GKDGKGEKISQQKVIARLQECGPRFTLKLRSLQHGTFDTKGGEYEWVHKPEMDTSRRRFF 360

Query: 229  L 227
            L
Sbjct: 361  L 361


>ref|XP_003548006.1| PREDICTED: LOW QUALITY PROTEIN: ribosome production factor 1-like
            [Glycine max]
          Length = 354

 Score =  510 bits (1314), Expect = e-142
 Identities = 250/340 (73%), Positives = 279/340 (82%)
 Frame = -3

Query: 1246 RTRTKRTDIDKSGGKPQLLPSMIKNKEKRSAVYXXXXXXXXXXXXXXXXXXXXXESRALE 1067
            R + +R   +K   +P L PSMIKNKEKRS ++                       RAL+
Sbjct: 16   RRKRERRRREKEKKEP-LRPSMIKNKEKRSELHAKLKQQKKLDKRAKAKARDAALKRALD 74

Query: 1066 LGEELPPKKIPRTIENTRDADETICKPDDEELFAGNDADEFSSIFNSERPPKILITTCRF 887
            LGEE P KK+PRTIENTR+ DET+CKPDD+ELFAGNDADEF SI N ++ PKILITTCRF
Sbjct: 75   LGEEPPEKKVPRTIENTRELDETVCKPDDDELFAGNDADEFGSILNQQQTPKILITTCRF 134

Query: 886  HSTRGPALIKDLIAVIPNAEYYKRGTYDLKKIVEYANNKEFTSVIVVHTSRREPDALLII 707
            HSTRGPA I +L++VIPNA Y+KRGTYDLKKIVEYA  K+FTSVIVVHT+RREPDALLII
Sbjct: 135  HSTRGPAFISELLSVIPNAHYFKRGTYDLKKIVEYAKKKDFTSVIVVHTNRREPDALLII 194

Query: 706  GLPNGPTAHFKLSNLVLRKDIKNHGNPTSHKPELVMNNFTTRLGHRVGRLIQSLFPQDPE 527
            G+P+GPTAHFKLS LVLRKDIKNHGNPT HKPELV+NNFTTRLGHRVGRLIQSLFPQDPE
Sbjct: 195  GVPDGPTAHFKLSKLVLRKDIKNHGNPTGHKPELVLNNFTTRLGHRVGRLIQSLFPQDPE 254

Query: 526  FRGRRVVTFHNQRDFIFFRHHRYIFETKENKQNDAKEKNKDTGEQKVAPKGKVIARLQEC 347
            F+GRRVVTFHNQRDFIFFRHHRYIFETKE K+ ++K K    G+ +  P+ K IARLQEC
Sbjct: 255  FKGRRVVTFHNQRDFIFFRHHRYIFETKEVKKTESKGKKDKEGKSENVPEQKTIARLQEC 314

Query: 346  GPRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 227
            GPRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 315  GPRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 354


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