BLASTX nr result

ID: Atractylodes22_contig00008462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008462
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vi...    62   4e-08
emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]    62   4e-08
ref|XP_002319855.1| tir-nbs-lrr resistance protein [Populus tric...    62   6e-08
gb|ABF81409.1| TIR-NBS-NBS-LRR type disease resistance protein [...    62   6e-08
ref|XP_002332400.1| tir-nbs-lrr resistance protein [Populus tric...    61   1e-07

>ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1233

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 9/104 (8%)
 Frame = +1

Query: 4    PSIVSSPKNLQVLNIGRHERIWSRWRRSL-----IPQKHPRS--LEMSSLAGLCSLRELV 162
            PS +   +NL++L+ G  + + S    SL     +P+K   +  L++ SL+GLCSLREL 
Sbjct: 814  PSSIVLLRNLEILSFGGCKGLASNSWSSLFSFWLLPRKSSDTIGLQLPSLSGLCSLRELD 873

Query: 163  CHNCNISE--VPDSIGGLSCLKSIDLRGNNFTSLPGCLSQLSRL 288
              +CN+ E  VP  I  LS L++++L  NNF SLP  +S+LS+L
Sbjct: 874  ISDCNLMEGAVPFDICNLSSLETLNLSRNNFFSLPAGISKLSKL 917


>emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]
          Length = 1244

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 9/104 (8%)
 Frame = +1

Query: 4    PSIVSSPKNLQVLNIGRHERIWSRWRRSL-----IPQKHPRS--LEMSSLAGLCSLRELV 162
            PS +   +NL++L+ G  + + S    SL     +P+K   +  L++ SL+GLCSLREL 
Sbjct: 782  PSSIVLLRNLEILSFGGCKGLASNSWSSLFSFWLLPRKSSDTIGLQLPSLSGLCSLRELD 841

Query: 163  CHNCNISE--VPDSIGGLSCLKSIDLRGNNFTSLPGCLSQLSRL 288
              +CN+ E  VP  I  LS L++++L  NNF SLP  +S+LS+L
Sbjct: 842  ISDCNLMEGAVPFDICNLSSLETLNLSRNNFFSLPAGISKLSKL 885


>ref|XP_002319855.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222858231|gb|EEE95778.1| tir-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1741

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
 Frame = +1

Query: 25   KNLQVLNIGRHERIWSRWRRSLIPQKHPRSLEMSSLAGLCSLRELVCHNCNISE--VPDS 198
            KNL+VL+    +RI       ++P          SL+GLCSL EL    CN+ E  VP+ 
Sbjct: 1294 KNLKVLSFKGCKRIAVNLTDQILP----------SLSGLCSLEELDLCACNLGEGAVPED 1343

Query: 199  IGGLSCLKSIDLRGNNFTSLPGCLSQLSRL 288
            IG LS L+S++L  NNF SLP  ++QLSRL
Sbjct: 1344 IGCLSSLRSLNLSRNNFISLPKSINQLSRL 1373


>gb|ABF81409.1| TIR-NBS-NBS-LRR type disease resistance protein [Populus trichocarpa]
            gi|105922325|gb|ABF81410.1| TIR-NBS-NBS-LRR type disease
            resistance protein [Populus trichocarpa]
          Length = 1778

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
 Frame = +1

Query: 25   KNLQVLNIGRHERIWSRWRRSLIPQKHPRSLEMSSLAGLCSLRELVCHNCNISE--VPDS 198
            KNL+VL+    +RI       ++P          SL+GLCSL EL    CN+ E  VP+ 
Sbjct: 1313 KNLKVLSFKGCKRIAVNLTDQILP----------SLSGLCSLEELDLCACNLGEGAVPED 1362

Query: 199  IGGLSCLKSIDLRGNNFTSLPGCLSQLSRL 288
            IG LS L+S++L  NNF SLP  ++QLSRL
Sbjct: 1363 IGCLSSLRSLNLSRNNFISLPKSINQLSRL 1392


>ref|XP_002332400.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832723|gb|EEE71200.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1119

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 43/97 (44%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
 Frame = +1

Query: 4   PSIVSSPKNLQVLNIGRHERIWSRWRRSLIPQKHPRSLEMSSLAGLCSLRELVCHNCNIS 183
           P+ +   KNL+VL+    +RI      SL  Q+ P      SL+GLCSL  L    CN+ 
Sbjct: 648 PASIFLLKNLKVLSFDGCKRI----AESLTDQRLP------SLSGLCSLEVLDLCACNLR 697

Query: 184 E--VPDSIGGLSCLKSIDLRGNNFTSLPGCLSQLSRL 288
           E  +P+ IG LS LKS+DL  NNF SLP  ++QLS L
Sbjct: 698 EGALPEDIGCLSSLKSLDLSRNNFVSLPRSINQLSGL 734


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