BLASTX nr result

ID: Atractylodes22_contig00008433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008433
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...    79   1e-12
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    70   6e-10
ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...    65   2e-08

>ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|222852846|gb|EEE90393.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 62/187 (33%), Positives = 91/187 (48%), Gaps = 4/187 (2%)
 Frame = -1

Query: 674 HMKWIKDCQHRNVHLVGDVITNCRYFAIQMLYEYGIMSTYLPGMEDQXXXXXXXXXXXXX 495
           H+  I+      V ++  +    R   +Q+L E GI S +LPG E               
Sbjct: 247 HLFNIESLGSIEVEMINSITKTSRITRLQILQEQGIFSIFLPGSE--VPSWYSHQKQNNS 304

Query: 494 XXFCVPLCPTKRRIQGLNVTALYRLSGEDEDMLILF---AKVSNTTRGLTWIYNPVVVCK 324
             F VP  P+ R+I+GLN+  +Y L   D+    L+   A++SN T+ L W YNP+V   
Sbjct: 305 VSFAVPPLPS-RKIRGLNLCIVYGLRNTDKKCATLYPPDAEISNKTKVLKWSYNPIVYGV 363

Query: 323 PNVGEDVTWASYWPV-RNMLDTGDEVYVSIFVGNGLVVSECGASLVYMDGEVEQENWDNN 147
           P +GED+ W S+W    + L+ GD+V VS  V     V +CG  LVY     EQE+    
Sbjct: 364 PQIGEDMLWLSHWRFGTDQLEVGDQVNVSASVTPDFQVKKCGVHLVY-----EQEDNYTL 418

Query: 146 TKGEEVI 126
              EE++
Sbjct: 419 LNNEEIV 425


>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
            gi|223543328|gb|EEF44860.1| TMV resistance protein N,
            putative [Ricinus communis]
          Length = 1186

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 11/232 (4%)
 Frame = -1

Query: 722  LFKLVPIGKLDKEHLGHMKWI--KDCQHRNVHLVGDVITNCRYFAIQMLYEYGIMSTYLP 549
            LFKL P+G ++ + L  +  I  +  +   V +   +       +IQ+L E GI S +LP
Sbjct: 929  LFKLEPVGNINTQILKSVGLINLESLKGVEVEMFNALACTEMRTSIQVLQECGIFSIFLP 988

Query: 548  GMEDQXXXXXXXXXXXXXXXFCVPLCPTKRRIQGLNVTALY---RLSGE---DEDMLILF 387
            G  +                F V   P   +I+GL++  LY   +L G    DE+     
Sbjct: 989  G--NTIPEWFNQRSESSSISFEVEAKPG-HKIKGLSLCTLYTYDKLEGGGYIDENC---- 1041

Query: 386  AKVSNTTRGLTWIYNPVVVCKPNVGEDVTWASYWPVRNMLDTGDEVYVSIFVGNGLVVSE 207
            AK++N T    W Y+P     P   E++ W S+W   + L+ GDEV++ + + +GL V +
Sbjct: 1042 AKINNKTICEKWTYSPTFYGMPKPLEEMLWLSHWTFGDQLEVGDEVHILVEMASGLTVKK 1101

Query: 206  CGASLVYMDGEVEQENWDNNTKG---EEVIGGDLSEFELSRGGWYYLCRRDF 60
            CG  L+Y +    QE  ++++       +   D+  +EL     YYLC   F
Sbjct: 1102 CGIRLIYEEESTTQEIAESSSSSSWYRTMADTDMEAYELGTAS-YYLCHHKF 1152


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
 Frame = -1

Query: 590  QMLYEYGIMSTYLPGMEDQXXXXXXXXXXXXXXXFCVPLCPTKRRIQGLNVTALYRLSGE 411
            Q+L E GI+S +L G E                    PL   K  I+GLN+  +Y     
Sbjct: 886  QVLQECGIVSFFLAGNE-VPHWFDHKSTGSSLSFTINPLSDYK--IRGLNLCTVY---AR 939

Query: 410  DEDMLIL-----FAKVSNTTRGLTWIYNPVVVCKP-NVGEDVTWASYWPVRNMLDTGDEV 249
            D ++  L     +A+++N T+G  W Y+P     P +  ED+ W SYW      + GD+V
Sbjct: 940  DHEVYWLHAAGHYARMNNETKGTNWSYSPTFYALPEDDDEDMLWLSYWKFGGEFEVGDKV 999

Query: 248  YVSIFVGNGLVVSECGASLVYMDGEVEQEN------WDNNTKGEEVIGGDLSEFELSRGG 87
             VS+ +  G  V ECG  +VY + E + ++        N+   + +   DLS +++ +  
Sbjct: 1000 NVSVRMPFGYYVKECGIRIVYEENEKDNQSNTADIIPSNSFWHQNITDRDLSPYQVGK-S 1058

Query: 86   WYYLCRRDFFKSTTPD 39
             Y+L    F   TTPD
Sbjct: 1059 VYFLHHHPF---TTPD 1071


>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548234|gb|EEF49725.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
 Frame = -1

Query: 719  FKLVPIGKLDKE--------HLGHMKWIKDCQHRNVHLVGDVITNCRYFAIQMLYEYGIM 564
            FKL PI   DKE        +LG ++ IK      V +   +    R    ++L+E GI 
Sbjct: 919  FKLEPINNHDKEMANMLGLFNLGPVETIK------VEMFSVMTMTSRITPPKVLHECGIC 972

Query: 563  STYLPGMEDQXXXXXXXXXXXXXXXFCVPLCPTK-RRIQGLNVTALYRLSGEDEDMLIL- 390
            S +LPG E                     + P+  R++ GLN+  +Y  +     +    
Sbjct: 973  SIFLPGSE----VPGWYSPQNEGPLISFTMPPSHVRKVCGLNICIVYTCNDVRNGLTDHH 1028

Query: 389  FAKVSNTTRGLTWIYNPVVVCKPNVGEDVTWASYWPVRNMLDTGDEVYVSIFVGNGLVVS 210
            + K+ N T+ L W Y+P+    P   + + W S+W + ++L+ GD++ VS  +  G    
Sbjct: 1029 YIKIWNKTKDLKWTYSPIFYGIPEPEKSMLWLSHWKLEDLLEGGDQLNVSAVMSTGYQAK 1088

Query: 209  ECGASLVYMDGEVEQENWDNNTKGEE 132
                 LVY     +QEN +     EE
Sbjct: 1089 NIRIHLVY-----DQENEETELNSEE 1109


Top