BLASTX nr result

ID: Atractylodes22_contig00008375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008375
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P48496.1|TPIC_SPIOL RecName: Full=Triosephosphate isomerase, ...   174   9e-42
ref|NP_179713.1| triosephosphate isomerase [Arabidopsis thaliana...   161   6e-38
ref|XP_002274871.1| PREDICTED: triosephosphate isomerase, chloro...   160   1e-37
ref|XP_002880361.1| hypothetical protein ARALYDRAFT_900526 [Arab...   155   4e-36
ref|XP_002529248.1| triosephosphate isomerase, putative [Ricinus...   151   5e-35

>sp|P48496.1|TPIC_SPIOL RecName: Full=Triosephosphate isomerase, chloroplastic; Short=TIM;
           Short=Triose-phosphate isomerase; Flags: Precursor
           gi|806312|gb|AAA66289.1| triosephosphate isomerase,
           chloroplast isozyme [Spinacia oleracea]
          Length = 322

 Score =  174 bits (440), Expect = 9e-42
 Identities = 96/146 (65%), Positives = 111/146 (76%)
 Frame = +2

Query: 80  MAMVSTSLTPASQLSGPKSAAASPSLFSGLRRSSKLDSASLSTTQSFFQSVNSHLRLCSA 259
           MA+VSTSL  ASQ++ P SA ++   FSGLRRS      S+ST  SFFQ+V+SHLRL S+
Sbjct: 1   MAVVSTSL--ASQITNPNSAVSTQ--FSGLRRSFLKLENSVSTQSSFFQNVDSHLRLSSS 56

Query: 260 STRPCRGIVAMAGTGKFFVGGNWKCNGTKDSIKQLVSDLNSATLEXXXXXXXXXXXXYID 439
           S R  RG+VAMAG+GKFFVGGNWKCNGTK+SI +LVSDLNSATLE            YID
Sbjct: 57  SRRCPRGVVAMAGSGKFFVGGNWKCNGTKESITKLVSDLNSATLEADVDVVVAPPFVYID 116

Query: 440 QVKSSLTDRIEIAAQNSWIGKGGAFT 517
           QVKSSLT R+EI+AQN WIGKGGAFT
Sbjct: 117 QVKSSLTGRVEISAQNCWIGKGGAFT 142


>ref|NP_179713.1| triosephosphate isomerase [Arabidopsis thaliana]
           gi|13431953|sp|Q9SKP6.1|TPIC_ARATH RecName:
           Full=Triosephosphate isomerase, chloroplastic;
           Short=TIM; Short=Triose-phosphate isomerase; Flags:
           Precursor gi|7839391|gb|AAF70259.1|AF247559_1
           triosephosphate isomerase [Arabidopsis thaliana]
           gi|14190441|gb|AAK55701.1|AF378898_1 At2g21170/F26H11.7
           [Arabidopsis thaliana] gi|4803926|gb|AAD29799.1|
           putative triosephosphate isomerase [Arabidopsis
           thaliana] gi|15450569|gb|AAK96462.1| At2g21170/F26H11.7
           [Arabidopsis thaliana] gi|21593477|gb|AAM65444.1|
           putative triosephosphate isomerase [Arabidopsis
           thaliana] gi|330252037|gb|AEC07131.1| triosephosphate
           isomerase [Arabidopsis thaliana]
          Length = 315

 Score =  161 bits (407), Expect = 6e-38
 Identities = 85/132 (64%), Positives = 101/132 (76%), Gaps = 4/132 (3%)
 Frame = +2

Query: 134 SAAASPSLFSGLRR-SSKLDSASLSTTQSFFQSVNSHLRLCSAST---RPCRGIVAMAGT 301
           ++  +P  FSGLRR S KLD+A++S+ QSFF  VNS  RL S+S+   R  RG+VAMAG+
Sbjct: 4   TSLTAPPSFSGLRRISPKLDAAAVSSHQSFFHRVNSSTRLVSSSSSSHRSPRGVVAMAGS 63

Query: 302 GKFFVGGNWKCNGTKDSIKQLVSDLNSATLEXXXXXXXXXXXXYIDQVKSSLTDRIEIAA 481
           GKFFVGGNWKCNGTKDSI +L+SDLNSATLE            YIDQVKSSLTDRI+I+ 
Sbjct: 64  GKFFVGGNWKCNGTKDSIAKLISDLNSATLEADVDVVVSPPFVYIDQVKSSLTDRIDISG 123

Query: 482 QNSWIGKGGAFT 517
           QNSW+GKGGAFT
Sbjct: 124 QNSWVGKGGAFT 135


>ref|XP_002274871.1| PREDICTED: triosephosphate isomerase, chloroplastic-like isoform 1
           [Vitis vinifera]
          Length = 324

 Score =  160 bits (404), Expect = 1e-37
 Identities = 94/151 (62%), Positives = 108/151 (71%), Gaps = 6/151 (3%)
 Frame = +2

Query: 83  AMVSTSLTPASQLSGPKSAAASPSL-----FSGLRRS-SKLDSASLSTTQSFFQSVNSHL 244
           A+ STSL  ASQLS PK+   S S      FSGLRRS S LD +     Q FF   +S+L
Sbjct: 3   AVTSTSL--ASQLSTPKATTPSYSYSSATQFSGLRRSFSNLDHSP----QPFF---SSNL 53

Query: 245 RLCSASTRPCRGIVAMAGTGKFFVGGNWKCNGTKDSIKQLVSDLNSATLEXXXXXXXXXX 424
           R+ S+  +PCRGIVAMAG+GKFFVGGNWKCNGTKDSI +LVSDLNSA LE          
Sbjct: 54  RISSSPRKPCRGIVAMAGSGKFFVGGNWKCNGTKDSISKLVSDLNSAKLEADVDVVVAPP 113

Query: 425 XXYIDQVKSSLTDRIEIAAQNSWIGKGGAFT 517
             Y+DQVK+SLTDRIEI+AQNSW+GKGGAFT
Sbjct: 114 FVYLDQVKNSLTDRIEISAQNSWVGKGGAFT 144


>ref|XP_002880361.1| hypothetical protein ARALYDRAFT_900526 [Arabidopsis lyrata subsp.
           lyrata] gi|297326200|gb|EFH56620.1| hypothetical protein
           ARALYDRAFT_900526 [Arabidopsis lyrata subsp. lyrata]
          Length = 314

 Score =  155 bits (391), Expect = 4e-36
 Identities = 82/131 (62%), Positives = 97/131 (74%), Gaps = 3/131 (2%)
 Frame = +2

Query: 134 SAAASPSLFSGLRRSSKLDSASLSTTQSFFQSVNSHLRLCSAST---RPCRGIVAMAGTG 304
           ++  +P  FSGLRR S    A++S+ QSFF  V+S  RL S+S+   R  RG+VAMAG+G
Sbjct: 4   TSLTAPPSFSGLRRISPKLDAAVSSHQSFFHRVSSSTRLVSSSSSSHRSPRGVVAMAGSG 63

Query: 305 KFFVGGNWKCNGTKDSIKQLVSDLNSATLEXXXXXXXXXXXXYIDQVKSSLTDRIEIAAQ 484
           KFFVGGNWKCNGTKDSI +LVSDLNSATLE            YIDQVKSSLTDRI+I+ Q
Sbjct: 64  KFFVGGNWKCNGTKDSIAKLVSDLNSATLEADVDVVVSPPFVYIDQVKSSLTDRIDISGQ 123

Query: 485 NSWIGKGGAFT 517
           NSW+GKGGAFT
Sbjct: 124 NSWVGKGGAFT 134


>ref|XP_002529248.1| triosephosphate isomerase, putative [Ricinus communis]
           gi|223531284|gb|EEF33126.1| triosephosphate isomerase,
           putative [Ricinus communis]
          Length = 313

 Score =  151 bits (382), Expect = 5e-35
 Identities = 84/146 (57%), Positives = 97/146 (66%)
 Frame = +2

Query: 80  MAMVSTSLTPASQLSGPKSAAASPSLFSGLRRSSKLDSASLSTTQSFFQSVNSHLRLCSA 259
           MAM+STSL+              PS FSGLR+S      + S +QSF +  NS LR  S+
Sbjct: 1   MAMLSTSLS-------------GPSQFSGLRQSCPKLLETHSLSQSFLRHFNSQLRSISS 47

Query: 260 STRPCRGIVAMAGTGKFFVGGNWKCNGTKDSIKQLVSDLNSATLEXXXXXXXXXXXXYID 439
           S +P R +VAMAGTG FFVGGNWKCNGTK+SI +LVSDLN A LE            YID
Sbjct: 48  SRKPSRHVVAMAGTGTFFVGGNWKCNGTKESISKLVSDLNDAKLEADVDVVVAPPFIYID 107

Query: 440 QVKSSLTDRIEIAAQNSWIGKGGAFT 517
           QVKSSLTDRIEI+AQNSW+ KGGAFT
Sbjct: 108 QVKSSLTDRIEISAQNSWVSKGGAFT 133


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