BLASTX nr result

ID: Atractylodes22_contig00008358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008358
         (1263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g1...   313   8e-83
emb|CBI20932.3| unnamed protein product [Vitis vinifera]              313   8e-83
ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   312   1e-82
ref|XP_002516614.1| ring finger protein, putative [Ricinus commu...   308   1e-81
ref|XP_002324833.1| predicted protein [Populus trichocarpa] gi|2...   306   6e-81

>ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
            vinifera]
          Length = 421

 Score =  313 bits (801), Expect = 8e-83
 Identities = 152/201 (75%), Positives = 167/201 (83%), Gaps = 3/201 (1%)
 Frame = +1

Query: 454  ARVRVLAEYLKMGLDCFFAVWFVVGNVWIFGGHSSSSDAPNLYRLCIVFLTFSCIGYAMP 633
            AR++VL EY KM LDCFFAVWFVVGNVWIFGGHSSSS+APNLYRLCIVFLTFSCIGYAMP
Sbjct: 221  ARLKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSSSEAPNLYRLCIVFLTFSCIGYAMP 280

Query: 634  FXXXXXXXXXXXXXXSVLGFREDLAQNRGATTESINALPTYKFK-KKHTN--DKETNSGT 804
            F              S+LGFREDL Q RGAT+ESINALPTYKFK KK+ N  D+E NSG 
Sbjct: 281  FILCATICCCLPCIISILGFREDLTQTRGATSESINALPTYKFKLKKNRNGDDREGNSGA 340

Query: 805  CDGGVVAAGTEKERIISGEDAVCCICLAKYANDDELRELPCSHFFHTDCVDKWLKINATC 984
             +GGVVAAGTE+ER+ISGEDAVCCICLAKYAN+DELRELPCSHFFH +CVDKWLKINA C
Sbjct: 341  GEGGVVAAGTERERVISGEDAVCCICLAKYANNDELRELPCSHFFHKECVDKWLKINALC 400

Query: 985  PLCKSEVGETILSSLTEATAN 1047
            PLCK EVGE+ L SL+  + N
Sbjct: 401  PLCKREVGESFLGSLSGLSIN 421



 Score =  139 bits (350), Expect = 2e-30
 Identities = 63/82 (76%), Positives = 73/82 (89%)
 Frame = +3

Query: 21  RRRSPLNSGYWISIELAITVSQIIAAIVVLSLSRHEHPHAPLFTWVIGYASGCVVTLPLL 200
           RRRSPLNSG WISIELA+TVSQIIA++VVLSLSRHEHPHAPLFTW++GYASGCV TLP+L
Sbjct: 98  RRRSPLNSGLWISIELALTVSQIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPIL 157

Query: 201 FWRFHNRNYASNQEPSQARQSS 266
           +WRF +RN    QE +Q+RQ S
Sbjct: 158 YWRFRHRNQGHEQESAQSRQVS 179


>emb|CBI20932.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score =  313 bits (801), Expect = 8e-83
 Identities = 152/201 (75%), Positives = 167/201 (83%), Gaps = 3/201 (1%)
 Frame = +1

Query: 454  ARVRVLAEYLKMGLDCFFAVWFVVGNVWIFGGHSSSSDAPNLYRLCIVFLTFSCIGYAMP 633
            AR++VL EY KM LDCFFAVWFVVGNVWIFGGHSSSS+APNLYRLCIVFLTFSCIGYAMP
Sbjct: 201  ARLKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSSSEAPNLYRLCIVFLTFSCIGYAMP 260

Query: 634  FXXXXXXXXXXXXXXSVLGFREDLAQNRGATTESINALPTYKFK-KKHTN--DKETNSGT 804
            F              S+LGFREDL Q RGAT+ESINALPTYKFK KK+ N  D+E NSG 
Sbjct: 261  FILCATICCCLPCIISILGFREDLTQTRGATSESINALPTYKFKLKKNRNGDDREGNSGA 320

Query: 805  CDGGVVAAGTEKERIISGEDAVCCICLAKYANDDELRELPCSHFFHTDCVDKWLKINATC 984
             +GGVVAAGTE+ER+ISGEDAVCCICLAKYAN+DELRELPCSHFFH +CVDKWLKINA C
Sbjct: 321  GEGGVVAAGTERERVISGEDAVCCICLAKYANNDELRELPCSHFFHKECVDKWLKINALC 380

Query: 985  PLCKSEVGETILSSLTEATAN 1047
            PLCK EVGE+ L SL+  + N
Sbjct: 381  PLCKREVGESFLGSLSGLSIN 401



 Score =  139 bits (350), Expect = 2e-30
 Identities = 63/82 (76%), Positives = 73/82 (89%)
 Frame = +3

Query: 21  RRRSPLNSGYWISIELAITVSQIIAAIVVLSLSRHEHPHAPLFTWVIGYASGCVVTLPLL 200
           RRRSPLNSG WISIELA+TVSQIIA++VVLSLSRHEHPHAPLFTW++GYASGCV TLP+L
Sbjct: 78  RRRSPLNSGLWISIELALTVSQIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPIL 137

Query: 201 FWRFHNRNYASNQEPSQARQSS 266
           +WRF +RN    QE +Q+RQ S
Sbjct: 138 YWRFRHRNQGHEQESAQSRQVS 159


>ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
            sativus] gi|449499624|ref|XP_004160867.1| PREDICTED: E3
            ubiquitin-protein ligase At4g11680-like [Cucumis sativus]
          Length = 424

 Score =  312 bits (800), Expect = 1e-82
 Identities = 151/196 (77%), Positives = 167/196 (85%), Gaps = 4/196 (2%)
 Frame = +1

Query: 454  ARVRVLAEYLKMGLDCFFAVWFVVGNVWIFGGHSSSSDAPNLYRLCIVFLTFSCIGYAMP 633
            AR++VL EY KMGLDCFFAVWFVVGNVWIFGGHSS+S+APNLYRLCIVFLTFSCIGYAMP
Sbjct: 220  ARLKVLVEYFKMGLDCFFAVWFVVGNVWIFGGHSSASEAPNLYRLCIVFLTFSCIGYAMP 279

Query: 634  FXXXXXXXXXXXXXXSVLGFREDLAQNRGATTESINALPTYKFKKKHT---NDKETNSGT 804
            F              S+LGFREDL+Q RGAT+ESINALPTYKFK K +   +D+E NSG 
Sbjct: 280  FILCVTICCCLPCIISILGFREDLSQTRGATSESINALPTYKFKLKKSRSGDDRENNSGA 339

Query: 805  CD-GGVVAAGTEKERIISGEDAVCCICLAKYANDDELRELPCSHFFHTDCVDKWLKINAT 981
             + GGVVAAGTEKER+ISGEDAVCCICLAKYAN+DELRELPCSHFFH DCVDKWLKINA 
Sbjct: 340  GEGGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINAL 399

Query: 982  CPLCKSEVGETILSSL 1029
            CPLCK+EVGE+I+ SL
Sbjct: 400  CPLCKAEVGESIVGSL 415



 Score =  124 bits (310), Expect = 7e-26
 Identities = 59/89 (66%), Positives = 74/89 (83%)
 Frame = +3

Query: 3   RGNSHGRRRSPLNSGYWISIELAITVSQIIAAIVVLSLSRHEHPHAPLFTWVIGYASGCV 182
           RG++  RRRSPLNSG WISIEL +T+SQIIAAI+VLSLS++E P APLF W++GYASGC 
Sbjct: 93  RGDAR-RRRSPLNSGLWISIELLLTMSQIIAAIIVLSLSKNEKPRAPLFAWIVGYASGCG 151

Query: 183 VTLPLLFWRFHNRNYASNQEPSQARQSST 269
            TLPLL+WR+ +RN AS Q+  Q+ QSS+
Sbjct: 152 ATLPLLYWRYRHRNQASEQDSLQSSQSSS 180


>ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
            gi|223544434|gb|EEF45955.1| ring finger protein, putative
            [Ricinus communis]
          Length = 437

 Score =  308 bits (790), Expect = 1e-81
 Identities = 147/204 (72%), Positives = 167/204 (81%), Gaps = 3/204 (1%)
 Frame = +1

Query: 454  ARVRVLAEYLKMGLDCFFAVWFVVGNVWIFGGHSSSSDAPNLYRLCIVFLTFSCIGYAMP 633
            AR++ L EY KM LDCFFAVWFVVGNVWIFGGHSS+++APN+YRLCIVFLTFSCIGYAMP
Sbjct: 220  ARLKTLVEYFKMALDCFFAVWFVVGNVWIFGGHSSATEAPNMYRLCIVFLTFSCIGYAMP 279

Query: 634  FXXXXXXXXXXXXXXSVLGFREDLAQNRGATTESINALPTYKFK-KKHT--NDKETNSGT 804
            F              S+LGFREDL Q RGAT+ESI+ALPTYKFK  KH   +D+++NSG 
Sbjct: 280  FILCATICCCLPCIISLLGFREDLGQTRGATSESIDALPTYKFKLNKHRTGDDRDSNSGA 339

Query: 805  CDGGVVAAGTEKERIISGEDAVCCICLAKYANDDELRELPCSHFFHTDCVDKWLKINATC 984
             DGGVVAAGTE ER ISGEDAVCCICLAKYAN+DELRELPCSHFFH DCVDKWLKINA+C
Sbjct: 340  GDGGVVAAGTEHERFISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASC 399

Query: 985  PLCKSEVGETILSSLTEATANLRR 1056
            PLCK+EVGE+++ SLT      R+
Sbjct: 400  PLCKTEVGESVMGSLTATNTGQRQ 423



 Score =  134 bits (338), Expect = 4e-29
 Identities = 61/82 (74%), Positives = 71/82 (86%)
 Frame = +3

Query: 21  RRRSPLNSGYWISIELAITVSQIIAAIVVLSLSRHEHPHAPLFTWVIGYASGCVVTLPLL 200
           RRRSPLNSG WIS+EL +TVSQIIA+IVVLSLSRHEHP APLF W++GYASGCV TLPLL
Sbjct: 99  RRRSPLNSGLWISVELVLTVSQIIASIVVLSLSRHEHPRAPLFAWIVGYASGCVATLPLL 158

Query: 201 FWRFHNRNYASNQEPSQARQSS 266
           +WR+ +RN  + QE +Q RQSS
Sbjct: 159 YWRYRHRNQVTEQEAAQPRQSS 180


>ref|XP_002324833.1| predicted protein [Populus trichocarpa] gi|222866267|gb|EEF03398.1|
            predicted protein [Populus trichocarpa]
          Length = 434

 Score =  306 bits (785), Expect = 6e-81
 Identities = 146/200 (73%), Positives = 165/200 (82%), Gaps = 1/200 (0%)
 Frame = +1

Query: 460  VRVLAEYLKMGLDCFFAVWFVVGNVWIFGGHSSSSDAPNLYRLCIVFLTFSCIGYAMPFX 639
            ++VL EY KM LDCFFAVWFVVGNVWIFG HSS+ +APNLYRLCIVFLTFSCIGYAMPF 
Sbjct: 221  LKVLLEYFKMALDCFFAVWFVVGNVWIFGSHSSAEEAPNLYRLCIVFLTFSCIGYAMPFI 280

Query: 640  XXXXXXXXXXXXXSVLGFREDLAQNRGATTESINALPTYKFKK-KHTNDKETNSGTCDGG 816
                         S+LGFREDL Q RGAT ESI+ALPT+KFK  K+ N ++++SG  DGG
Sbjct: 281  LCATICCCLPCIISILGFREDLTQTRGATPESIDALPTHKFKLIKNRNGEDSSSGAADGG 340

Query: 817  VVAAGTEKERIISGEDAVCCICLAKYANDDELRELPCSHFFHTDCVDKWLKINATCPLCK 996
            +VAAGTEKER+ISGEDAVCCICLAKYAN+DELRELPCSHFFH DCVDKWLKINA+CPLCK
Sbjct: 341  IVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCK 400

Query: 997  SEVGETILSSLTEATANLRR 1056
            SEVGE+IL SL    ++ RR
Sbjct: 401  SEVGESILGSLPGLNSSQRR 420



 Score =  124 bits (310), Expect = 7e-26
 Identities = 56/82 (68%), Positives = 68/82 (82%)
 Frame = +3

Query: 21  RRRSPLNSGYWISIELAITVSQIIAAIVVLSLSRHEHPHAPLFTWVIGYASGCVVTLPLL 200
           RRRSPLNSG WIS+EL +T+SQIIA+IVVLS+SR EHP APLF W++GYASGCV TLPLL
Sbjct: 96  RRRSPLNSGLWISVELVLTLSQIIASIVVLSVSRKEHPRAPLFAWIVGYASGCVATLPLL 155

Query: 201 FWRFHNRNYASNQEPSQARQSS 266
           +WR+ +RN A  Q+ +Q  Q S
Sbjct: 156 YWRYSHRNQALEQDSAQNHQGS 177


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