BLASTX nr result

ID: Atractylodes22_contig00008357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008357
         (1272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putativ...   485   e-134
ref|XP_004169855.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   470   e-130
ref|XP_004137350.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   470   e-130
ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   470   e-130
ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   465   e-129

>ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223530219|gb|EEF32123.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 1173

 Score =  485 bits (1248), Expect = e-134
 Identities = 265/427 (62%), Positives = 298/427 (69%), Gaps = 4/427 (0%)
 Frame = -3

Query: 1270 TKVSSRRREDSVDNSGPSKVDESNSDKKXXXXXXXXXXXXXRKLDDEMXXXXXXXXXXXX 1091
            T  SSR R++S D S   K  E   DKK             ++LD+EM            
Sbjct: 229  TSRSSRHRDES-DGSPRKKSGEDELDKKEKKTREEELEDEQKRLDEEMEKRRRRVQEWQE 287

Query: 1090 XXXXXXXXXXXQLGVAGETDEPKSGKTWTLEGESDDEEAAPVENAEGXXXXXXXVKHDNE 911
                       + G A   DEP++GKTWTLEGESDDEEA     +E         K D E
Sbjct: 288  LRRKKEESEREKHGEASNADEPQTGKTWTLEGESDDEEAPLAGKSETNMDLDENAKPDEE 347

Query: 910  IGDGMVNGLDTVPALQNGGDMD---DEEIDPLDAFMNSMVLPEVSKLSSTEIPVS-DQKS 743
            IGD MV       A    GD D   DEEIDPLDAFMNSMVLPEV KL++  I  + D+  
Sbjct: 348  IGDAMVVDSYNGTATSENGDNDVIEDEEIDPLDAFMNSMVLPEVEKLNNAVITETVDENK 407

Query: 742  SNLKKDDKIQDNGQQRKKSAGRSMGRIIPGEDSDSDYTGVXXXXXXXXXXXXXEFMKRVK 563
              LKK  +  + G++ KK + +S+GRIIPGEDSDSDY  +             EFMKRVK
Sbjct: 408  VELKKKKEEGNEGEKLKKGSNKSLGRIIPGEDSDSDYGDLENDEGPLDDEDDDEFMKRVK 467

Query: 562  KTKVEKLSLVDHSKIDYIPFRKNFYIEVKEIQRMTVEEVAAYRKELELKIHGKDVPKPIK 383
            KTK EKLS+VDHSKIDY PFRKNFYIEVKEI RM  EEVAAYRK+LELKIHGKDVPKP+K
Sbjct: 468  KTKAEKLSVVDHSKIDYKPFRKNFYIEVKEISRMAPEEVAAYRKQLELKIHGKDVPKPVK 527

Query: 382  TWHQTGLTTKVLETIRKLNYDKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLAFVLPMLR 203
            TWHQTGL +K+LETI+KLNY+KPMPIQAQALPIIMSGRDCIG+AKTGSGKTLAFVLPMLR
Sbjct: 528  TWHQTGLASKILETIKKLNYEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLR 587

Query: 202  HIKDQPPLMSGDGPIGLIMAPTRELVQQIHSDIKKFTKVMGLSCVPVYGGSGVAQQISEL 23
            HIKDQP + +GDGPIGLIMAPTRELVQQIHSDIKKF KV+G+ CVPVYGGSGVAQQISEL
Sbjct: 588  HIKDQPLVEAGDGPIGLIMAPTRELVQQIHSDIKKFAKVLGIRCVPVYGGSGVAQQISEL 647

Query: 22   KRGTEIV 2
            KRGTEIV
Sbjct: 648  KRGTEIV 654


>ref|XP_004169855.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            42-like [Cucumis sativus]
          Length = 1098

 Score =  470 bits (1210), Expect = e-130
 Identities = 261/426 (61%), Positives = 296/426 (69%), Gaps = 9/426 (2%)
 Frame = -3

Query: 1252 RREDSVDNSGPSKVDESNSDKKXXXXXXXXXXXXXRK-LDDEMXXXXXXXXXXXXXXXXX 1076
            ++ D VD S   K +E   DK              +K LD+EM                 
Sbjct: 175  KQRDHVDESPXRKSEEDAFDKNEXKPTREEELENEQKRLDEEMEKRRRRVQEWQKSRRLK 234

Query: 1075 XXXXXXQLGVAGETDEPKSGKTWTLEGESDDE--EAAPVENAEGXXXXXXXVKHDNEIGD 902
                  + G     DEPKSGKTWTLEGESDDE   A P E           +    +I  
Sbjct: 235  EEADGDKQGELN-ADEPKSGKTWTLEGESDDEYENARPTETDMDVDENSKPLVDGEQIAV 293

Query: 901  GMVNGLDTV---PALQNGGDMDDEEIDPLDAFMNSMVLPEVSKLSSTEIP-VSDQKSSNL 734
               NG +     P    GGD  D+EIDPLDAFMNSMVLPEV KL+  E+P V+D K   L
Sbjct: 294  NFNNGNEAAASPPQDSIGGDAADDEIDPLDAFMNSMVLPEVEKLNKVEVPTVNDDKIVEL 353

Query: 733  KKDDKIQDN--GQQRKKSAGRSMGRIIPGEDSDSDYTGVXXXXXXXXXXXXXEFMKRVKK 560
            K  DK  D   G+ +++ + +SMGRIIPGEDSD+DY  +             EFMKRVKK
Sbjct: 354  KSRDKPSDQSGGKAQRRISNKSMGRIIPGEDSDTDYGDLENDGDTLEDEDDDEFMKRVKK 413

Query: 559  TKVEKLSLVDHSKIDYIPFRKNFYIEVKEIQRMTVEEVAAYRKELELKIHGKDVPKPIKT 380
            TK EKLS+VDHSK+DY PFRKNFYIEVKEI RMT+EEVAAYRK+LELKIHGKDVPKP+KT
Sbjct: 414  TKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLEEVAAYRKQLELKIHGKDVPKPVKT 473

Query: 379  WHQTGLTTKVLETIRKLNYDKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLAFVLPMLRH 200
            WHQTGLT+K+LETI+KLNY+KPMPIQAQALPI+MSGRDCIG+AKTGSGKTLAFVLPMLRH
Sbjct: 474  WHQTGLTSKILETIKKLNYEKPMPIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRH 533

Query: 199  IKDQPPLMSGDGPIGLIMAPTRELVQQIHSDIKKFTKVMGLSCVPVYGGSGVAQQISELK 20
            IKDQ P++ GDGPIGLIMAPTRELVQQIHSDIKKF+KVMGL CVPVYGGSGVAQQISELK
Sbjct: 534  IKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFSKVMGLRCVPVYGGSGVAQQISELK 593

Query: 19   RGTEIV 2
            RG EIV
Sbjct: 594  RGAEIV 599


>ref|XP_004137350.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 2
            [Cucumis sativus]
          Length = 1040

 Score =  470 bits (1210), Expect = e-130
 Identities = 260/426 (61%), Positives = 295/426 (69%), Gaps = 9/426 (2%)
 Frame = -3

Query: 1252 RREDSVDNSGPSKVDESNSDKKXXXXXXXXXXXXXRK-LDDEMXXXXXXXXXXXXXXXXX 1076
            ++ D VD S   K +E   DK              +K LD+EM                 
Sbjct: 97   KQRDHVDESPREKSEEDAFDKNETKPTREEELENEQKRLDEEMEKRRRRVQEWQKSRRLK 156

Query: 1075 XXXXXXQLGVAGETDEPKSGKTWTLEGESDDE--EAAPVENAEGXXXXXXXVKHDNEIGD 902
                  + G     DEPKSGKTWTLEGESDDE   A P E           +    +I  
Sbjct: 157  EEADGDKQGELN-ADEPKSGKTWTLEGESDDEYENARPTETDMDVDENSKPLVDGEQIAV 215

Query: 901  GMVNGLDTV---PALQNGGDMDDEEIDPLDAFMNSMVLPEVSKLSSTEIP-VSDQKSSNL 734
               NG +     P    GGD  D+EIDPLDAFMNSMVLPEV KL+  E+P V+D K   L
Sbjct: 216  NFNNGNEAAASPPQDSIGGDAADDEIDPLDAFMNSMVLPEVEKLNKVEVPTVNDDKIVEL 275

Query: 733  KKDDKIQDN--GQQRKKSAGRSMGRIIPGEDSDSDYTGVXXXXXXXXXXXXXEFMKRVKK 560
            K  DK  D   G+ +++ + +SMGRIIPGEDSD+DY  +             EFMKRVKK
Sbjct: 276  KSRDKPSDQSGGKAQRRISNKSMGRIIPGEDSDTDYGDLENDGDTLEDEDDDEFMKRVKK 335

Query: 559  TKVEKLSLVDHSKIDYIPFRKNFYIEVKEIQRMTVEEVAAYRKELELKIHGKDVPKPIKT 380
            TK EKLS+VDHSK+DY PFRKNFYIEVKEI RMT+EEVAAYRK+LELKIHGKDVPKP+KT
Sbjct: 336  TKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLEEVAAYRKQLELKIHGKDVPKPVKT 395

Query: 379  WHQTGLTTKVLETIRKLNYDKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLAFVLPMLRH 200
            WHQTGLT+K+LETI+KLNY+KPMPIQAQALPI+MSGRDCIG+AKTGSGKTLAFVLPMLRH
Sbjct: 396  WHQTGLTSKILETIKKLNYEKPMPIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRH 455

Query: 199  IKDQPPLMSGDGPIGLIMAPTRELVQQIHSDIKKFTKVMGLSCVPVYGGSGVAQQISELK 20
            IKDQ P++ GDGPIGLIMAPTRELVQQIHSDIKKF+KVMGL CVPVYGGSGVAQQISELK
Sbjct: 456  IKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFSKVMGLRCVPVYGGSGVAQQISELK 515

Query: 19   RGTEIV 2
            RG EIV
Sbjct: 516  RGAEIV 521


>ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 1
            [Cucumis sativus]
          Length = 1118

 Score =  470 bits (1210), Expect = e-130
 Identities = 260/426 (61%), Positives = 295/426 (69%), Gaps = 9/426 (2%)
 Frame = -3

Query: 1252 RREDSVDNSGPSKVDESNSDKKXXXXXXXXXXXXXRK-LDDEMXXXXXXXXXXXXXXXXX 1076
            ++ D VD S   K +E   DK              +K LD+EM                 
Sbjct: 175  KQRDHVDESPREKSEEDAFDKNETKPTREEELENEQKRLDEEMEKRRRRVQEWQKSRRLK 234

Query: 1075 XXXXXXQLGVAGETDEPKSGKTWTLEGESDDE--EAAPVENAEGXXXXXXXVKHDNEIGD 902
                  + G     DEPKSGKTWTLEGESDDE   A P E           +    +I  
Sbjct: 235  EEADGDKQGELN-ADEPKSGKTWTLEGESDDEYENARPTETDMDVDENSKPLVDGEQIAV 293

Query: 901  GMVNGLDTV---PALQNGGDMDDEEIDPLDAFMNSMVLPEVSKLSSTEIP-VSDQKSSNL 734
               NG +     P    GGD  D+EIDPLDAFMNSMVLPEV KL+  E+P V+D K   L
Sbjct: 294  NFNNGNEAAASPPQDSIGGDAADDEIDPLDAFMNSMVLPEVEKLNKVEVPTVNDDKIVEL 353

Query: 733  KKDDKIQDN--GQQRKKSAGRSMGRIIPGEDSDSDYTGVXXXXXXXXXXXXXEFMKRVKK 560
            K  DK  D   G+ +++ + +SMGRIIPGEDSD+DY  +             EFMKRVKK
Sbjct: 354  KSRDKPSDQSGGKAQRRISNKSMGRIIPGEDSDTDYGDLENDGDTLEDEDDDEFMKRVKK 413

Query: 559  TKVEKLSLVDHSKIDYIPFRKNFYIEVKEIQRMTVEEVAAYRKELELKIHGKDVPKPIKT 380
            TK EKLS+VDHSK+DY PFRKNFYIEVKEI RMT+EEVAAYRK+LELKIHGKDVPKP+KT
Sbjct: 414  TKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLEEVAAYRKQLELKIHGKDVPKPVKT 473

Query: 379  WHQTGLTTKVLETIRKLNYDKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLAFVLPMLRH 200
            WHQTGLT+K+LETI+KLNY+KPMPIQAQALPI+MSGRDCIG+AKTGSGKTLAFVLPMLRH
Sbjct: 474  WHQTGLTSKILETIKKLNYEKPMPIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRH 533

Query: 199  IKDQPPLMSGDGPIGLIMAPTRELVQQIHSDIKKFTKVMGLSCVPVYGGSGVAQQISELK 20
            IKDQ P++ GDGPIGLIMAPTRELVQQIHSDIKKF+KVMGL CVPVYGGSGVAQQISELK
Sbjct: 534  IKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFSKVMGLRCVPVYGGSGVAQQISELK 593

Query: 19   RGTEIV 2
            RG EIV
Sbjct: 594  RGAEIV 599


>ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
            vinifera]
          Length = 1147

 Score =  465 bits (1197), Expect = e-129
 Identities = 257/427 (60%), Positives = 289/427 (67%), Gaps = 8/427 (1%)
 Frame = -3

Query: 1258 SRRREDSVDNSGPSKVDESNSDKKXXXXXXXXXXXXXRKLDDEMXXXXXXXXXXXXXXXX 1079
            S R  D  ++S   K D+ + DKK             RKLD+EM                
Sbjct: 229  SNRHRDEGEDSPRKKSDDDDLDKKERRTREEDLEEEQRKLDEEMEKRRRRVQEWQELKRK 288

Query: 1078 XXXXXXXQLGVAGETDEPKSGKTWTLEGESDDEEAAPVENAEGXXXXXXXVK-HDNEIGD 902
                   +LG A   DEPKSGKTWTLEGESDDE+ AP  N+E         K  DNE+GD
Sbjct: 289  REESEREKLGEAANADEPKSGKTWTLEGESDDEDVAPTGNSETDLNMDEDAKPTDNEVGD 348

Query: 901  GMV----NGLDTVPALQNG--GDMDDEEIDPLDAFMNSMVLPEVSKLSSTEI-PVSDQKS 743
            GM     NG  +   LQNG  G   DEEIDPLDAFMNSMVLPEV KL++  + P S+   
Sbjct: 349  GMAIDSQNG-TSASTLQNGDEGADGDEEIDPLDAFMNSMVLPEVEKLNNAAVSPTSN--- 404

Query: 742  SNLKKDDKIQDNGQQRKKSAGRSMGRIIPGEDSDSDYTGVXXXXXXXXXXXXXEFMKRVK 563
                                      ++P EDSDSDY  +             EFMKRVK
Sbjct: 405  -------------------------AVVPSEDSDSDYGDLENNEDPLEEEDDDEFMKRVK 439

Query: 562  KTKVEKLSLVDHSKIDYIPFRKNFYIEVKEIQRMTVEEVAAYRKELELKIHGKDVPKPIK 383
            KTK E+LS+VDHSKIDY PFRKNFYIEVKE  RMT EE+AAYRK+LELKIHGKDVPKP+K
Sbjct: 440  KTKAERLSIVDHSKIDYKPFRKNFYIEVKESARMTPEEIAAYRKQLELKIHGKDVPKPVK 499

Query: 382  TWHQTGLTTKVLETIRKLNYDKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLAFVLPMLR 203
            TWHQTGLTTK+L+TI+KLNY++PMPIQAQALPIIMSGRDCIG+AKTGSGKTLAFVLPMLR
Sbjct: 500  TWHQTGLTTKILDTIKKLNYERPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLR 559

Query: 202  HIKDQPPLMSGDGPIGLIMAPTRELVQQIHSDIKKFTKVMGLSCVPVYGGSGVAQQISEL 23
            HIKDQPP+M GDGPIGLIMAPTRELVQQIHSDIKKF KV+G+SCVPVYGGSGVAQQISEL
Sbjct: 560  HIKDQPPVMPGDGPIGLIMAPTRELVQQIHSDIKKFAKVVGISCVPVYGGSGVAQQISEL 619

Query: 22   KRGTEIV 2
            KRG E+V
Sbjct: 620  KRGAEVV 626


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