BLASTX nr result

ID: Atractylodes22_contig00008346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00008346
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002886335.1| WD-40 repeat family protein [Arabidopsis lyr...    97   1e-18
dbj|BAH20268.1| AT1G64610 [Arabidopsis thaliana]                       97   1e-18
emb|CAN69136.1| hypothetical protein VITISV_019124 [Vitis vinifera]    97   1e-18
ref|NP_176642.1| WD40 domain-containing protein [Arabidopsis tha...    97   1e-18
ref|XP_002263491.2| PREDICTED: uncharacterized protein LOC100249...    97   2e-18

>ref|XP_002886335.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332176|gb|EFH62594.1| WD-40 repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 644

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 10/77 (12%)
 Frame = -1

Query: 292 SFTQNNYVTCVEFNLMNDNYFISGSIDGKVRIWDVHRCQVIDWINIGDIVTAFCYYPD-- 119
           +FT NN+VTCV FN ++DNYFISGSIDGKVRIWDV RC+V+D+ +I DIVTA CY PD  
Sbjct: 355 TFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAK 414

Query: 118 --------GNVCFIHAF 92
                   GN  F H F
Sbjct: 415 GAVIGSMTGNCRFYHIF 431


>dbj|BAH20268.1| AT1G64610 [Arabidopsis thaliana]
          Length = 623

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 10/77 (12%)
 Frame = -1

Query: 292 SFTQNNYVTCVEFNLMNDNYFISGSIDGKVRIWDVHRCQVIDWINIGDIVTAFCYYPD-- 119
           +FT NN+VTCV FN ++DNYFISGSIDGKVRIWDV RC+V+D+ +I DIVTA CY PD  
Sbjct: 334 TFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAK 393

Query: 118 --------GNVCFIHAF 92
                   GN  F H F
Sbjct: 394 GAVIGSMTGNCRFYHIF 410


>emb|CAN69136.1| hypothetical protein VITISV_019124 [Vitis vinifera]
          Length = 717

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/99 (49%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
 Frame = -1

Query: 289 FTQNNYVTCVEFNLMNDNYFISGSIDGKVRIWDVHRCQVIDWINIGDIVTAFCYYPDGNV 110
           F+ NNYVTCV+FN ++DNYFISGSIDGKVRIW++   QV+DW +I +IVTA CY PDG V
Sbjct: 369 FSHNNYVTCVQFNPVDDNYFISGSIDGKVRIWEIPGGQVVDWTDITEIVTAVCYRPDGKV 428

Query: 109 CFIHAFAFLLLSVMF*TKKAIFICLL---LGSIVGTLDG 2
                               +F+C L   +G IVG++ G
Sbjct: 429 -------------------GVFLCCLFVEMGXIVGSMTG 448


>ref|NP_176642.1| WD40 domain-containing protein [Arabidopsis thaliana]
           gi|42571997|ref|NP_974089.1| WD40 domain-containing
           protein [Arabidopsis thaliana]
           gi|17381206|gb|AAL36415.1| unknown protein [Arabidopsis
           thaliana] gi|20465811|gb|AAM20010.1| unknown protein
           [Arabidopsis thaliana] gi|332196139|gb|AEE34260.1| WD40
           domain-containing protein [Arabidopsis thaliana]
           gi|332196140|gb|AEE34261.1| WD40 domain-containing
           protein [Arabidopsis thaliana]
          Length = 647

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 10/77 (12%)
 Frame = -1

Query: 292 SFTQNNYVTCVEFNLMNDNYFISGSIDGKVRIWDVHRCQVIDWINIGDIVTAFCYYPD-- 119
           +FT NN+VTCV FN ++DNYFISGSIDGKVRIWDV RC+V+D+ +I DIVTA CY PD  
Sbjct: 358 TFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAK 417

Query: 118 --------GNVCFIHAF 92
                   GN  F H F
Sbjct: 418 GAVIGSMTGNCRFYHIF 434


>ref|XP_002263491.2| PREDICTED: uncharacterized protein LOC100249640 [Vitis vinifera]
          Length = 729

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 42/58 (72%), Positives = 50/58 (86%)
 Frame = -1

Query: 289 FTQNNYVTCVEFNLMNDNYFISGSIDGKVRIWDVHRCQVIDWINIGDIVTAFCYYPDG 116
           F  N+YVTCV+FN ++DNYFISGSIDGKVRIW+VHR +V+DW +I DIVTA CY PDG
Sbjct: 415 FYHNDYVTCVDFNPVDDNYFISGSIDGKVRIWEVHRHKVVDWTDIRDIVTAVCYRPDG 472


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